LOCUS       NM_053952               4304 bp    mRNA    linear   ROD 18-FEB-2024
DEFINITION  Rattus norvegicus nucleoporin 155 (Nup155), mRNA.
ACCESSION   NM_053952
VERSION     NM_053952.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4304)
  AUTHORS   Kehat,I., Accornero,F., Aronow,B.J. and Molkentin,J.D.
  TITLE     Modulation of chromatin position and gene expression by HDAC4
            interaction with nucleoporins
  JOURNAL   J Cell Biol 193 (1), 21-29 (2011)
   PUBMED   21464227
REFERENCE   2  (bases 1 to 4304)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   3  (bases 1 to 4304)
  AUTHORS   Zhang,X., Chen,S., Yoo,S., Chakrabarti,S., Zhang,T., Ke,T.,
            Oberti,C., Yong,S.L., Fang,F., Li,L., de la Fuente,R., Wang,L.,
            Chen,Q. and Wang,Q.K.
  TITLE     Mutation in nuclear pore component NUP155 leads to atrial
            fibrillation and early sudden cardiac death
  JOURNAL   Cell 135 (6), 1017-1027 (2008)
   PUBMED   19070573
REFERENCE   4  (bases 1 to 4304)
  AUTHORS   Hawryluk-Gara,L.A., Shibuya,E.K. and Wozniak,R.W.
  TITLE     Vertebrate Nup53 interacts with the nuclear lamina and is required
            for the assembly of a Nup93-containing complex
  JOURNAL   Mol Biol Cell 16 (5), 2382-2394 (2005)
   PUBMED   15703211
REFERENCE   5  (bases 1 to 4304)
  AUTHORS   Wells,L., Vosseller,K., Cole,R.N., Cronshaw,J.M., Matunis,M.J. and
            Hart,G.W.
  TITLE     Mapping sites of O-GlcNAc modification using affinity tags for
            serine and threonine post-translational modifications
  JOURNAL   Mol Cell Proteomics 1 (10), 791-804 (2002)
   PUBMED   12438562
  REMARK    GeneRIF: BEMAD was used on a purified nuclear pore complex
            preparation to map novel sites of O-GlcNAc modification on Nup155.
REFERENCE   6  (bases 1 to 4304)
  AUTHORS   Radu,A., Blobel,G. and Wozniak,R.W.
  TITLE     Nup155 is a novel nuclear pore complex protein that contains
            neither repetitive sequence motifs nor reacts with WGA
  JOURNAL   J Cell Biol 121 (1), 1-9 (1993)
   PUBMED   8458861
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CM038648.1.
            
            [WARNING] On Apr 9, 2024 this sequence was replaced by NM_053952.3.
            
            On Aug 3, 2022 this sequence version replaced NM_053952.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: Z21780.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132280, SAMD00132281
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-222               CM038648.1         62377452-62377673
            223-360             CM038648.1         62380395-62380532
            361-457             CM038648.1         62381434-62381530
            458-528             CM038648.1         62383314-62383384
            529-621             CM038648.1         62384138-62384230
            622-788             CM038648.1         62384929-62385095
            789-894             CM038648.1         62385715-62385820
            895-968             CM038648.1         62387309-62387382
            969-1060            CM038648.1         62388427-62388518
            1061-1158           CM038648.1         62389458-62389555
            1159-1311           CM038648.1         62390121-62390273
            1312-1412           CM038648.1         62393636-62393736
            1413-1583           CM038648.1         62397063-62397233
            1584-1694           CM038648.1         62398753-62398863
            1695-1789           CM038648.1         62399860-62399954
            1790-1878           CM038648.1         62402087-62402175
            1879-1941           CM038648.1         62402752-62402814
            1942-2089           CM038648.1         62403847-62403994
            2090-2156           CM038648.1         62406609-62406675
            2157-2272           CM038648.1         62407917-62408032
            2273-2370           CM038648.1         62409859-62409956
            2371-2501           CM038648.1         62411531-62411661
            2502-2693           CM038648.1         62413322-62413513
            2694-2832           CM038648.1         62414413-62414551
            2833-2968           CM038648.1         62415367-62415502
            2969-3122           CM038648.1         62416882-62417035
            3123-3227           CM038648.1         62417238-62417342
            3228-3382           CM038648.1         62417951-62418105
            3383-3512           CM038648.1         62419634-62419763
            3513-3626           CM038648.1         62420615-62420728
            3627-3747           CM038648.1         62421842-62421962
            3748-3858           CM038648.1         62422466-62422576
            3859-3995           CM038648.1         62426058-62426194
            3996-4102           CM038648.1         62427752-62427858
            4103-4304           CM038648.1         62428549-62428750
FEATURES             Location/Qualifiers
     source          1..4304
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="SHRSP/BbbUtx"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q16"
     gene            1..4304
                     /gene="Nup155"
                     /note="nucleoporin 155"
                     /db_xref="GeneID:117021"
                     /db_xref="RGD:621199"
     CDS             69..4241
                     /gene="Nup155"
                     /note="P140; nucleoporin Nup155; 155 kDa nucleoporin;
                     nucleoporin 155kD"
                     /codon_start=1
                     /product="nuclear pore complex protein Nup155"
                     /protein_id="NP_446404.2"
                     /db_xref="GeneID:117021"
                     /db_xref="RGD:621199"
                     /translation="MPSMLGSMMVASTSAPSLQEALENAGRLIDRQLQEDRMYPDLSE
                     LLMVSAPNSPTVSGMSDMDYPLQGPGLLSVPSLPEISTIRRVPLPPELVEQFGHMQCN
                     CMMGVFPPISRAWLTIDSDIFMWNYEDGGDLAYFDGLSETILAVGLVKPKAGIFQPHV
                     RHLLVLATPVDIVILGLSYANVQTGSGILNDSVCGGLQLLPDPLYSLPTDNTYLLTIT
                     STDNGRIFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSSLSFLVPSLLQFTFSEDD
                     PIVQIEIDNSRNILYTRSEKGVIQVYDLGHDGQGMSRVASVSQNAIVCAAGNIARTID
                     RSVFKPIVQIAVIENSESLDCQLLAVTHAGVRLYFSTCPFRQPLARPNTLTLVHVRLP
                     PGFSASSTVEKPSKVHKALYSKGILLMTASENEDNDILWCVNHDTFPFQKPMMETQMT
                     TRVDGHSWALSAIDELKVDKIITPLNKDHIPITDSPVVVQQHMLPPKKFVLLSAQGSL
                     MFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQEDQACATCLILACSTAACDREVSA
                     WATRAFFRYGGEAQMRFPATLPTPSNVGPILGSPMYSSSPVPTGSPYPNPSSLGTPSH
                     GAQPPTMSTPMSAVGNPAMQAASLSGLTGPEIVYSGKHNGICIYFSRIMGNIWDASLV
                     VERVFKSSNREITAIESSVPIQLLESVLQELKGLQEFLDRNSQFSGGPLGNPNTTAKV
                     QQRLLGVMRPENGNTQQMQQELQRKFHEAQLSEKISLQAIQQLVRKSYQALALWKLLC
                     EHQFTVIVGELQKEFQEQLKITTFKDLVIRDKEVTGALIASLINCYIRDNAAVDGISL
                     HLQDTCPLLYSTDDAVCSKANELLQRSRQVQSKSERERMLRESLKEYQKISNQVDLPS
                     VCAQYRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDVVGLQTFQERLNSYK
                     CITDTLQELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHHFEQMLKLAQRSK
                     DELFSIALYNWLIQADLADKLLQIASPFLEPHLVRMAKVDQNRVRYMDLLWRYYEKNR
                     SFSSAARVLSKLADMHSTEISLQQRLEYIARAILSAKSSTAISSIAADGEFLHELEEK
                     MEVARIQLQIQETLQRQYSHHSSVQDAISQLDSELMDITKLYGEFADPFKLAECKLAI
                     IHCAGYSDPILVHTLWQDIIEKELSDSVTLSSSDRMHALSLKLVLLGKIYAGTPRFFP
                     LDFIVQFLEQQVCTLNWDVGFVIQTMNEIGVPLPRLLEVYDQLFKSRDPFWNRVKSPL
                     HLLDCIHVLLTRYVENPSLVLNCERRRFTNLCLDAVCGYLVELQSMSSSVAVQAITGN
                     FKSLQAKLERLH"
ORIGIN      
        1 cttggttttt ctcacggctc ttcgcggctt tggagtattt ttgtaacgcg gtgacgacga
       61 ttgtcgacat gccatctatg ctgggctcga tgatggtggc ctctacgtcg gccccctccc
      121 tgcaagaagc tttggaaaat gcggggaggc ttatcgaccg acagttgcaa gaagaccgca
      181 tgtacccgga cctttctgag ctgctcatgg tgtcggcccc aaacagtcct actgtttctg
      241 gaatgtctga tatggattac cctctgcaag gaccaggtct actgtcagta ccgagccttc
      301 cagagatcag caccatccga agagttcccc tcccgcctga gctggttgaa cagtttggac
      361 acatgcagtg taactgcatg atgggtgttt tccctcctat cagcagagct tggcttacaa
      421 ttgacagtga catattcatg tggaactatg aagacggagg tgaccttgcc tattttgatg
      481 gactcagtga gacaattctt gctgtggggc ttgtgaaacc aaaagctgga atctttcaac
      541 ctcatgtaag acatttgttg gttttggcaa cacctgtgga tatagtaatt cttggactca
      601 gctatgctaa tgttcagaca ggctctggca tccttaatga tagtgtgtgt ggtggcctgc
      661 agctgcttcc agatcctttg tactcccttc ccacggacaa cacttacctt ttaactatca
      721 cctccacgga taatggcagg atttttttgg ctggaaagga cggctgtttg tatgaagtag
      781 cataccaagc agaagcaggc tggttcagtc aaagatgtag gaagataaac cactccaaga
      841 gctcgctctc cttcctcgtg ccttccttgc tgcagttcac cttctcagaa gatgatccta
      901 ttgttcaaat tgaaattgat aattccagaa atattttgta tacccgatcg gagaaaggag
      961 tgatacaggt ttatgatttg ggccatgatg gacaggggat gagtagagtt gcttcagttt
     1021 cacagaatgc cattgtctgt gctgctggga acattgctag gactatcgat cgttccgttt
     1081 ttaagccaat tgttcaaata gctgtgattg agaactctga atcattggac tgtcagttac
     1141 tggctgtcac tcatgcaggt gtgaggttgt atttcagcac ttgtccgttt agacagccat
     1201 tagctcggcc caatacactg acactggttc acgtccggtt acctcctggc ttctcagcgt
     1261 cttcaacagt tgaaaagcct tcaaaagtac ataaagcact ttacagtaaa ggaattttac
     1321 tgatgacagc ctcagaaaat gaagataatg acattttatg gtgtgtcaac catgatacat
     1381 ttcctttcca aaagccaatg atggaaactc agatgacaac tcgtgttgat ggccattcct
     1441 gggctctttc tgcaatagat gaattaaaag tagataaaat aatcacgcct ttaaataaag
     1501 atcatattcc aataactgac tccccagttg ttgtacaaca gcacatgttg cctccaaaga
     1561 aattcgttct cctctcagca cagggtagtc ttatgtttca caaacttaga cccgtagatc
     1621 agctgagaca tctgcttgtg agtaacgtgg gaggggatgg agaagagatt gagagattct
     1681 tcaaattaca tcaggaagac caagcttgtg cgacgtgcct tattcttgct tgttccaccg
     1741 ctgcctgtga cagagaggtg tctgcctggg ctacgcgggc attctttagg tatggtggtg
     1801 aggcacagat gagatttcca gctactcttc ccactccgag taacgttggt cccatcctgg
     1861 gctctcctat gtattctagt tctcctgttc ctactgggag tccctatcca aatccttcct
     1921 ctttggggac accatcccat ggtgctcagc ctcctaccat gtcaacccca atgtctgctg
     1981 ttggaaaccc agccatgcag gctgcaagcc tgagtggttt gactggacca gagattgtgt
     2041 actcaggaaa acacaacggt atttgcattt acttttctcg aatcatggga aatatttggg
     2101 atgctagctt agttgttgaa agagtattca agagttccaa cagggagatc actgcaattg
     2161 aaagcagtgt gcccatccag ctgctggagt cagtgctaca ggaactgaag ggtttgcagg
     2221 aatttctaga cagaaattct cagttttcag gaggaccact aggaaatcca aataccactg
     2281 ccaaagtgca gcagaggctg cttggagtca tgcgtcccga gaatggaaac acccagcaaa
     2341 tgcaacagga gctgcagagg aagtttcatg aggctcaact gagtgagaag atttcacttc
     2401 aggcaatcca gcagctagtt agaaaatcgt accaagctct ggctttgtgg aaactccttt
     2461 gtgaacatca gtttactgtc attgtaggag aacttcaaaa ggaatttcaa gagcagctga
     2521 agatcactac ctttaaggat ctggtaatca gggacaaaga ggtcactgga gcactaattg
     2581 cttctctcat caactgctac atcagagaca atgctgctgt agatggcatt agtttacatc
     2641 tgcaggacac ctgtccgctt ctgtatagca cagatgatgc agtttgttcc aaggcaaatg
     2701 aacttcttca gcgttcccgg caagttcaga gtaagagcga gagagagagg atgttgaggg
     2761 agtctctgaa ggagtaccag aaaatcagca accaagtaga cctccccagt gtgtgtgctc
     2821 agtatcggca agtgcgcttt tatgagggtg tggtggaact gtctcttact gctgcggaga
     2881 agaaagatcc tcagggtctt ggactccatt tctataagca tggggaaccg gaagaggatg
     2941 tggttggtct tcagactttc caagagagat taaacagtta caagtgcatc acagacactc
     3001 ttcaagaact ggtaaatcaa agtaaggcag ctcctcagtc tcctagtgta cccaaaaagc
     3061 ctggtcctcc agtgttgtca tccgatccca acatgctgag caatgaagag gcaggacatc
     3121 actttgaaca aatgcttaaa ctggctcagc gatccaagga tgagctcttc agtattgctc
     3181 tctataactg gctaatccaa gctgaccttg cagataaact gctacagatt gcatctccat
     3241 ttcttgagcc acatcttgtc cgaatggcca aagtggatca aaaccgagtt cgctatatgg
     3301 atttactctg gaggtattat gagaagaaca ggagtttcag cagtgctgct cgggtcctgt
     3361 ccaagctggc cgacatgcac agcacagaaa tttcactgca gcagcgacta gaatacattg
     3421 ctcgagccat tcttagtgca aaaagttcca ctgccatttc atccatagct gcagatggtg
     3481 aattcctaca tgaactagaa gagaaaatgg aagttgctag gatccaactt cagatacaag
     3541 agacactaca aaggcagtac tcccatcatt cttcagtgca ggatgcaatt tctcagctgg
     3601 attctgagct catggacatt actaagcttt atggagaatt tgctgaccca tttaaacttg
     3661 cagaatgtaa acttgcaatc attcattgtg ctggttattc agatcccata ttggtacaca
     3721 cactttggca agatatcata gagaaagaat tgagtgatag cgtaacattg agttcatcag
     3781 atcgaatgca tgctcttagc ctcaagcttg ttctccttgg caaaatctat gctggcacac
     3841 ctcgattttt ccctctggat ttcattgtgc agttcttgga gcagcaagtt tgtactttaa
     3901 actgggatgt gggatttgtg atacagacca tgaatgaaat cggtgtgcct ttacctaggc
     3961 tactagaagt ttatgatcag ctcttcaaat caagggatcc attctggaac agagtgaaaa
     4021 gtccactgca ccttttggat tgtatccatg tactgttgac aagatatgtt gagaatccta
     4081 gcctagtttt aaattgtgag aggagaaggt ttacaaatct ctgcctggat gccgtctgtg
     4141 gttatctggt tgaacttcag tcaatgagct cttcggtggc agtacaagcc atcactggga
     4201 attttaaatc tctccaagcg aagttggaac ggctccatta attactgtag tatattttct
     4261 tgcttgcgtt ttggtctgta aaataaaagc tcggatgggt ccag
//
