LOCUS       NM_001007758            1671 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus nuclear FMR1 interacting protein 1 (Nufip1),
            mRNA.
ACCESSION   NM_001007758 XM_344438
VERSION     NM_001007758.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1671)
  AUTHORS   McKeegan,K.S., Debieux,C.M., Boulon,S., Bertrand,E. and
            Watkins,N.J.
  TITLE     A dynamic scaffold of pre-snoRNP factors facilitates human box C/D
            snoRNP assembly
  JOURNAL   Mol Cell Biol 27 (19), 6782-6793 (2007)
   PUBMED   17636026
REFERENCE   2  (bases 1 to 1671)
  AUTHORS   Cabart,P., Chew,H.K. and Murphy,S.
  TITLE     BRCA1 cooperates with NUFIP and P-TEFb to activate transcription by
            RNA polymerase II
  JOURNAL   Oncogene 23 (31), 5316-5329 (2004)
   PUBMED   15107825
REFERENCE   3  (bases 1 to 1671)
  AUTHORS   Bardoni,B., Willemsen,R., Weiler,I.J., Schenck,A., Severijnen,L.A.,
            Hindelang,C., Lalli,E. and Mandel,J.L.
  TITLE     NUFIP1 (nuclear FMRP interacting protein 1) is a nucleocytoplasmic
            shuttling protein associated with active synaptoneurosomes
  JOURNAL   Exp Cell Res 289 (1), 95-107 (2003)
   PUBMED   12941608
REFERENCE   4  (bases 1 to 1671)
  AUTHORS   Bardoni,B., Schenck,A. and Mandel,J.L.
  TITLE     A novel RNA-binding nuclear protein that interacts with the fragile
            X mental retardation (FMR1) protein
  JOURNAL   Hum Mol Genet 8 (13), 2557-2566 (1999)
   PUBMED   10556305
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC082111.1.
            
            On Nov 29, 2004 this sequence version replaced XM_344438.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC082111.1, SRR8487227.239465.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15q11"
     gene            1..1671
                     /gene="Nufip1"
                     /note="nuclear FMR1 interacting protein 1"
                     /db_xref="GeneID:364430"
                     /db_xref="RGD:1359440"
     exon            1..397
                     /gene="Nufip1"
                     /inference="alignment:Splign:2.1.0"
     CDS             4..1464
                     /gene="Nufip1"
                     /note="nuclear FMRP-interacting protein 1; NUFIP1, FMR1
                     interacting protein 1"
                     /codon_start=1
                     /product="FMR1-interacting protein NUFIP1"
                     /protein_id="NP_001007759.1"
                     /db_xref="GeneID:364430"
                     /db_xref="RGD:1359440"
                     /translation="MAEPTPAGWPSAPELTPAPGTPSEAAPPQDNWVYWAMLPPPPPP
                     LSSPVAGTEPCQKEQPHVEPQPTSGAFPPFDAQILPAAQPPFDAQAPPDGQSQFNDQQ
                     AWNFQASTPWYWGLSPNGFPTYNTSFHSPATHSYFPQSYANYNDFNLPQNRKQKKKKR
                     KEPVFHFFCDTCDRGFKNQEKYDIHMSEHKKCPEVDCSFSAHEKIVQFHWRNMHAPGM
                     KKIKLDTPEDIARWREERRKNYPTLANIERKKLLQLEKEKRGEVLTTTQYGKMKGMSR
                     HSQMAKIRSPGKHYKWKSGGARQRAVLGLGNRARDLKPEIPTKVNVDPLGVLIHSDSE
                     SDKDEKSQRAIVPKEVTPALCSLMSSYGNVSGSESEPEEAPIKTEAEVLAENRVLPSS
                     PPKSPRHNVRTTARTVLRAKWKAQRSGLRKITLKQKKSPCHPLFEPRTRHPHLLEMLL
                     APDIRHERNVILQCVRYIIKKDFFGLTAGSVKTEDV"
     exon            398..477
                     /gene="Nufip1"
                     /inference="alignment:Splign:2.1.0"
     exon            478..576
                     /gene="Nufip1"
                     /inference="alignment:Splign:2.1.0"
     exon            577..639
                     /gene="Nufip1"
                     /inference="alignment:Splign:2.1.0"
     exon            640..716
                     /gene="Nufip1"
                     /inference="alignment:Splign:2.1.0"
     exon            717..809
                     /gene="Nufip1"
                     /inference="alignment:Splign:2.1.0"
     exon            810..1003
                     /gene="Nufip1"
                     /inference="alignment:Splign:2.1.0"
     exon            1004..1120
                     /gene="Nufip1"
                     /inference="alignment:Splign:2.1.0"
     exon            1121..1347
                     /gene="Nufip1"
                     /inference="alignment:Splign:2.1.0"
     exon            1348..1636
                     /gene="Nufip1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcatggctg agccgactcc tgccgggtgg ccttcagccc cggaactgac tcccgcgccc
       61 gggactccga gcgaagcggc gccgcctcag gacaactggg tgtactgggc catgctgccg
      121 ccgccaccac ctcctctgtc gtccccggtg gcggggacgg agccgtgtca gaaggaacag
      181 ccccacgtgg agccccagcc tacctccgga gcgtttcccc cgttcgatgc tcagattctt
      241 cccgcggcgc agcctccttt tgatgcccag gcccctccag atggtcaatc tcagttcaac
      301 gaccagcagg cctggaattt ccaagcctcg acgccttggt actggggatt gtctcctaat
      361 ggtttcccca catataacac gtccttccac tctccggcta cacattctta ttttccacaa
      421 tcatatgcaa attacaatga cttcaatttg cctcaaaaca gaaaacagaa aaagaagaaa
      481 agaaaggaac cggttttcca ctttttctgt gatacctgtg atcgaggctt taaaaatcaa
      541 gaaaagtacg atatacacat gtctgaacat aaaaaatgcc ctgaagtaga ttgctctttc
      601 agtgcacatg agaagattgt ccagtttcac tggagaaata tgcacgctcc tggtatgaag
      661 aagatcaagc tagatactcc agaggatatt gcaagatgga gggaagaaag acgaaaaaac
      721 tacccaactc tggccaatat tgaaaggaag aagctgttac agctggaaaa ggaaaagaga
      781 ggagaagtgt tgacaaccac acagtacggc aaaatgaagg gcatgtccag acattcacag
      841 atggcaaaga tcaggagtcc tggtaaacat tataaatgga aaagcggtgg ggctagacag
      901 agagcagtcc ttggactagg caatcgtgcc agagatttga agcctgaaat tccgaccaag
      961 gttaatgtag accctcttgg tgtattgatc cacagcgact ctgagtctga taaggatgag
     1021 aaatcacaaa gggctatagt gcccaaggaa gtgacaccag ccttgtgctc actgatgagc
     1081 agctacggca atgtctccgg gtcagagagt gaaccagaag aagctcccat caagacggaa
     1141 gcagaagttc tggcagaaaa ccgtgttctt cctagcagtc ctcccaagag tccaagacac
     1201 aatgttcgaa caaccgctag aactgtctta cgagccaagt ggaaggccca gaggagtggg
     1261 ctccgaaaga taacccttaa gcagaaaaag agcccctgcc acccattatt tgaaccaaga
     1321 acacgtcacc cacatctcct ggagatgctt ctagctccag atattcgaca tgagagaaat
     1381 gtgattctgc agtgtgttcg atatatcatc aaaaaagact tttttggact tactgctggt
     1441 tctgtgaaaa ctgaagatgt gtagatgtct cgtgtctcca cacatttatg taaagtatgt
     1501 gagagagctt ggagagaaag ccagcaacgt ctgaagacag acagggtcag ttacttaact
     1561 gtgaacctcc tgcatgttat gtcggatttt acgtctgtcc tttggcttta tgaaaataaa
     1621 tgcatagctg gtctttaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//
