LOCUS       NM_001305426            1050 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus nudix hydrolase 7 (Nudt7), transcript variant 1,
            mRNA.
ACCESSION   NM_001305426
VERSION     NM_001305426.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1050)
  AUTHORS   Song,M.G., Li,Y. and Kiledjian,M.
  TITLE     Multiple mRNA decapping enzymes in mammalian cells
  JOURNAL   Mol Cell 40 (3), 423-432 (2010)
   PUBMED   21070968
REFERENCE   2  (bases 1 to 1050)
  AUTHORS   Ghosh,D. and Berg,J.M.
  TITLE     A proteome-wide perspective on peroxisome targeting signal
            1(PTS1)-Pex5p affinities
  JOURNAL   J Am Chem Soc 132 (11), 3973-3979 (2010)
   PUBMED   20178365
REFERENCE   3  (bases 1 to 1050)
  AUTHORS   Wu,Y. and Smas,C.M.
  TITLE     Wdnm1-like, a new adipokine with a role in MMP-2 activation
  JOURNAL   Am J Physiol Endocrinol Metab 295 (1), E205-E215 (2008)
   PUBMED   18492766
REFERENCE   4  (bases 1 to 1050)
  AUTHORS   Abdelraheim,S.R., Spiller,D.G. and McLennan,A.G.
  TITLE     Mammalian NADH diphosphatases of the Nudix family: cloning and
            characterization of the human peroxisomal NUDT12 protein
  JOURNAL   Biochem J 374 (Pt 2), 329-335 (2003)
   PUBMED   12790796
REFERENCE   5  (bases 1 to 1050)
  AUTHORS   Gasmi,L. and McLennan,A.G.
  TITLE     The mouse Nudt7 gene encodes a peroxisomal nudix hydrolase specific
            for coenzyme A and its derivatives
  JOURNAL   Biochem J 357 (Pt 1), 33-38 (2001)
   PUBMED   11415433
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            FM122430.1, FM098914.1 and JAXUCZ010000019.1.
            
            Transcript Variant: This variant (1) represents the shorter
            transcript but encodes the longer isoform (1).
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FM122430.1, CB584022.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-25                FM122430.1         1-25
            26-564              FM098914.1         1-539
            565-1050            JAXUCZ010000019.1  59048663-59049148
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q12"
     gene            1..1050
                     /gene="Nudt7"
                     /note="nudix hydrolase 7"
                     /db_xref="GeneID:361413"
                     /db_xref="RGD:1306719"
     exon            1..77
                     /gene="Nudt7"
                     /inference="alignment:Splign:2.1.0"
     CDS             43..753
                     /gene="Nudt7"
                     /EC_number="3.6.1.-"
                     /note="isoform 1 is encoded by transcript variant 1; nudix
                     motif 7; peroxisomal coenzyme A diphosphatase NUDT7;
                     peroxisomal coenzyme A diphosphatase NUDT7-like; nudix
                     (nucleoside diphosphate linked moiety X)-type motif 7"
                     /codon_start=1
                     /product="peroxisomal coenzyme A diphosphatase NUDT7
                     isoform 1"
                     /protein_id="NP_001292355.1"
                     /db_xref="GeneID:361413"
                     /db_xref="RGD:1306719"
                     /translation="MPRPCGLQESVRNNLIDDAKARLKKFDVGTRYSHLSPSKYSVLL
                     PLLARGEKLYLLFTVRSDKLRRAPGEVCFPGGKRDPVDADDTATALREAQEEVGLHPH
                     QVEVVSHLVPYFINNNDLVTPVVGFLDPDFQAQPNADEVKDVFLVPLDYFLCPQVYYQ
                     SHFTHSGYHFVLHCFEYTDPETGSKYLIKGMTSKLAVLAALIIFEKSPSFETEFDLHD
                     LIPSCEKTFLHRCSSSKL"
     exon            78..231
                     /gene="Nudt7"
                     /inference="alignment:Splign:2.1.0"
     exon            232..390
                     /gene="Nudt7"
                     /inference="alignment:Splign:2.1.0"
     exon            391..1050
                     /gene="Nudt7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccgaagtctc cagccgcttg taggaaaggt acagcagggc cgatgccgcg accttgtgga
       61 ctccaggagt ctgtcagaaa caatctgatt gacgatgcca aggctcgctt gaaaaagttt
      121 gatgttggga ccagatattc ccacttgtcc cctagtaagt attctgttct tctgccattg
      181 ctggccagag gagaaaagct gtacttgctg ttcacggtcc gctcagacaa gctgagaagg
      241 gcacctggag aagtctgctt ccctggagga aagagggacc cagtggatgc agatgacaca
      301 gcgactgctc tccgtgaagc ccaggaggag gtggggctgc atccccacca agtggaggtg
      361 gtctctcacc tggtgccata ttttattaat aacaatgacc tggtaacgcc cgtagtggga
      421 tttctagacc ccgacttcca ggcccagcct aatgctgatg aagtgaagga tgtgttcctc
      481 gtgcctttgg actatttcct ctgtccccaa gtctactacc agagtcactt cacacattct
      541 ggctaccatt ttgttttgca ttgctttgaa tacacagacc ctgagactgg ctcgaagtac
      601 ctcatcaagg gaatgacctc aaaattggct gtgctggctg ccttaattat ttttgaaaaa
      661 agtccttcct tcgagaccga atttgatctc catgacctga taccatcttg tgagaagacc
      721 tttcttcata gatgttcttc cagcaaattg tgaagtcacc gaaacccaaa agaacataca
      781 cgaggttttt gcatgagctt atgctcagaa cagcagcatt agcgagtggt atctgacagg
      841 tgtgaatata tttcgtacac cgtgattgtg agggccttac ctggtttcca gtagccaatt
      901 tttcaccttg aacactataa gtctttcaga actggaaaaa aaagcacgag cagggtagtc
      961 taattttacc cattaaaatg tcgctatttt tagttgtttt atgggtgtct gtcacatagt
     1021 aggcacttaa taaatatttg tcaaatataa
//
