LOCUS       NM_001130561            2158 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus NudC domain containing 1 (Nudcd1), mRNA.
ACCESSION   NM_001130561 XM_001063815 XM_343235
VERSION     NM_001130561.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2158)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC169014.1.
            
            On Sep 4, 2008 this sequence version replaced NM_001130561.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC169014.1, SRR8487230.133710.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760434 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2158
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q31"
     gene            1..2158
                     /gene="Nudcd1"
                     /gene_synonym="RGD1310624"
                     /note="NudC domain containing 1"
                     /db_xref="GeneID:362906"
                     /db_xref="RGD:1310624"
     exon            1..181
                     /gene="Nudcd1"
                     /gene_synonym="RGD1310624"
                     /inference="alignment:Splign:2.1.0"
     CDS             67..1809
                     /gene="Nudcd1"
                     /gene_synonym="RGD1310624"
                     /EC_number="2.3.2.27"
                     /codon_start=1
                     /product="nudC domain-containing protein 1"
                     /protein_id="NP_001124033.1"
                     /db_xref="GeneID:362906"
                     /db_xref="RGD:1310624"
                     /translation="MEAANCSLRVKRPLLDPRFEGYKLSLEPLPCYQLELDAAVAEVK
                     LRDDQYTLEHMHAFGMYNYLHCDAWYQDSVYYIDNLGRIMNLTVMLDTALGKPREVFR
                     LPTDVTACDNRLCASLHFTSPSWVTLSDGTGRLYVIGTGDRGHSPEKWEIMFNEELGN
                     PFIIIHSISLLKAEEHSVAILLLRIEKEELDMKGSGFYVSLEWVIVSKKKEDSKKYEI
                     TKHHVLRGKSVPHYAAIEPNGNGLMIASYKSFKVVSVDQDLEESMDRPEKIKVEPLYY
                     WQQTEDDLTVTVRLPEGSTKDDIQIQFLPDNINIKLKDIQVVEGKLYSSIDHEGSTWT
                     IKENDGLEISLIKKNEGLMWPELVVGDKQGELIRDPAQCAAIAERLMHLTSDELNPNP
                     DKEKPPCNAQELEECDIFFEESSSLCRFDGNTLKTTHVVNLGSNQYLFSVIVDPKEMP
                     CFCLRHDVDALLWQPHCSQQDDMWEHIATFNALGYVQASKRDKKFFACAPNYSYAALC
                     ECLRRVFIYRQPTPMSTVLYNRKEGRHVGQVAKQQVTSLETNDPILGFQATNERLFVL
                     TTKNLFLIKVNTEN"
     exon            182..336
                     /gene="Nudcd1"
                     /gene_synonym="RGD1310624"
                     /inference="alignment:Splign:2.1.0"
     exon            337..519
                     /gene="Nudcd1"
                     /gene_synonym="RGD1310624"
                     /inference="alignment:Splign:2.1.0"
     exon            520..700
                     /gene="Nudcd1"
                     /gene_synonym="RGD1310624"
                     /inference="alignment:Splign:2.1.0"
     exon            701..877
                     /gene="Nudcd1"
                     /gene_synonym="RGD1310624"
                     /inference="alignment:Splign:2.1.0"
     exon            878..1085
                     /gene="Nudcd1"
                     /gene_synonym="RGD1310624"
                     /inference="alignment:Splign:2.1.0"
     exon            1086..1230
                     /gene="Nudcd1"
                     /gene_synonym="RGD1310624"
                     /inference="alignment:Splign:2.1.0"
     exon            1231..1356
                     /gene="Nudcd1"
                     /gene_synonym="RGD1310624"
                     /inference="alignment:Splign:2.1.0"
     exon            1357..1516
                     /gene="Nudcd1"
                     /gene_synonym="RGD1310624"
                     /inference="alignment:Splign:2.1.0"
     exon            1517..2133
                     /gene="Nudcd1"
                     /gene_synonym="RGD1310624"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caggagtgaa gcgcgaacct ttcaacaaga gctttattga ttctcttgct tggatccggc
       61 aacgcgatgg aggcggctaa ttgctccctg cgggtgaaaa gacccctgct ggatccccgc
      121 ttcgagggct acaagctatc gctcgagcct ctgccctgct accagctgga gcttgatgca
      181 gctgtggcag aagtaaaact tcgggatgac cagtatacat tggaacacat gcatgctttt
      241 ggaatgtata attatctgca ctgtgatgcc tggtaccaag acagtgtcta ctacattgat
      301 aaccttggaa gaattatgaa cttaacagtg atgctggaca ctgccttagg aaaaccccga
      361 gaggtgttcc gccttcctac agatgtgaca gcatgtgaca atcgtctttg tgcatctctc
      421 catttcacat ccccttcctg ggttaccttg tcagacggaa ctggaagact gtatgtcatt
      481 ggaacaggtg accgaggaca cagtcctgaa aaatgggaga ttatgtttaa tgaagagctt
      541 gggaatcctt ttattataat tcacagtatc tcattgctga aagctgaaga acattcagtg
      601 gctatcctgc ttcttcgaat agagaaggag gaattggaca tgaaaggaag tggtttctat
      661 gtatctttgg agtgggtcat tgtcagtaag aagaaagaag atagtaaaaa gtatgaaatt
      721 acaaagcatc atgttctccg tggaaagtca gtgccacatt atgctgcgat tgaacctaat
      781 ggaaatggtc taatgattgc atcttacaag tccttcaagg ttgtttcagt agatcaggat
      841 cttgaagaga gtatggaccg gccagagaaa atcaaagtag aacctctgta ttactggcag
      901 caaactgagg atgatttgac agtaacagta aggcttccag aaggcagtac taaggacgat
      961 attcaaatac agtttttgcc tgataacatc aacattaagc tgaaggatat ccaggttgtg
     1021 gaaggaaaac tctattcatc tattgatcac gaaggcagca catggacgat taaagagaat
     1081 gatggcttgg agatttcttt gattaagaag aatgaaggac tgatgtggcc tgagctggtg
     1141 gttggtgata aacaagggga acttataaga gaccctgccc aatgtgctgc aatagcagag
     1201 cgcttgatgc acctgacctc tgacgaactg aatccaaatc cagataaaga aaaacctcct
     1261 tgtaatgctc aagaattaga agaatgtgat attttctttg aagagagctc cagtttatgc
     1321 agatttgatg gcaatacatt aaaaacaact catgtggtga atcttggcag caaccagtac
     1381 ctgttctcag tcattgtgga ccctaaagaa atgccgtgct tctgtctgcg ccatgatgtg
     1441 gatgctctcc tctggcaacc acactgcagc cagcaggatg acatgtggga gcacattgca
     1501 accttcaatg ctctaggtta tgtgcaagca tcaaagagag acaagaagtt ttttgcgtgt
     1561 gctccaaatt actcatacgc agcgctgtgt gagtgccttc gccgagtgtt catctaccgg
     1621 cagcccaccc ccatgtccac agtgctgtac aacagaaagg agggcaggca tgtggggcag
     1681 gttgctaagc agcaagtcac aagcctagaa accaatgatc ccattttagg ctttcaggca
     1741 acaaatgaga ggttatttgt tctcactacc aaaaatctct ttttaataaa agtaaatacg
     1801 gagaattaat cttacaacat ttggctaaaa ggtattcaat agtacctgga gggcagaaca
     1861 gttgtactgt aacttgataa gttttggcat gttgaataag aatatctttt atgaagtttt
     1921 atttttaaag gatactggag atgtattgaa tagattataa atctataaaa gctgtaggat
     1981 agatgaagct acaggtttag agaacactgg cttctgtaaa aatatggtga tcttggcaaa
     2041 tacagttatt ttttaaaacc ttaggatcca atctcaactt ttatatgaaa catgtacaat
     2101 tcagtgttta aaaataaaaa tatttatcat gtaaaaaaaa aaaaaaaaaa aaaaaaaa
//
