LOCUS       NM_001009619            2142 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus NUBP iron-sulfur cluster assembly factor 1
            (Nubp1), mRNA.
ACCESSION   NM_001009619 XM_213205
VERSION     NM_001009619.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2142)
  AUTHORS   Paul,V.D. and Lill,R.
  TITLE     Biogenesis of cytosolic and nuclear iron-sulfur proteins and their
            role in genome stability
  JOURNAL   Biochim Biophys Acta 1853 (6), 1528-1539 (2015)
   PUBMED   25583461
  REMARK    Review article
REFERENCE   2  (bases 1 to 2142)
  AUTHORS   Maio,N. and Rouault,T.A.
  TITLE     Iron-sulfur cluster biogenesis in mammalian cells: New insights
            into the molecular mechanisms of cluster delivery
  JOURNAL   Biochim Biophys Acta 1853 (6), 1493-1512 (2015)
   PUBMED   25245479
  REMARK    Review article
REFERENCE   3  (bases 1 to 2142)
  AUTHORS   Schnatwinkel,C. and Niswander,L.
  TITLE     Nubp1 is required for lung branching morphogenesis and distal
            progenitor cell survival in mice
  JOURNAL   PLoS One 7 (9), e44871 (2012)
   PUBMED   23028652
REFERENCE   4  (bases 1 to 2142)
  AUTHORS   Stehling,O., Netz,D.J., Niggemeyer,B., Rosser,R., Eisenstein,R.S.,
            Puccio,H., Pierik,A.J. and Lill,R.
  TITLE     Human Nbp35 is essential for both cytosolic iron-sulfur protein
            assembly and iron homeostasis
  JOURNAL   Mol Cell Biol 28 (17), 5517-5528 (2008)
   PUBMED   18573874
REFERENCE   5  (bases 1 to 2142)
  AUTHORS   Christodoulou,A., Lederer,C.W., Surrey,T., Vernos,I. and Santama,N.
  TITLE     Motor protein KIFC5A interacts with Nubp1 and Nubp2, and is
            implicated in the regulation of centrosome duplication
  JOURNAL   J Cell Sci 119 (Pt 10), 2035-2047 (2006)
   PUBMED   16638812
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            FQ229330.1, JAXUCZ010000010.1, FQ214074.1, FQ136567.1 and
            FQ144533.1.
            
            On Mar 3, 2021 this sequence version replaced NM_001009619.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ218444.1, FQ220638.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760393 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-674               FQ229330.1         4-677
            675-819             JAXUCZ010000010.1  5766918-5767062     c
            820-1005            FQ229330.1         679-864
            1006-1008           FQ214074.1         793-795
            1009-1380           FQ229330.1         868-1239
            1381-1525           JAXUCZ010000010.1  5766918-5767062     c
            1526-1634           FQ136567.1         671-779             c
            1635-1836           FQ144533.1         470-671             c
            1837-2286           FQ136567.1         19-468              c
FEATURES             Location/Qualifiers
     source          1..2142
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q11"
     gene            1..2142
                     /gene="Nubp1"
                     /note="NUBP iron-sulfur cluster assembly factor 1"
                     /db_xref="GeneID:287042"
                     /db_xref="RGD:1310514"
     exon            1..57
                     /gene="Nubp1"
                     /inference="alignment:Splign:2.1.0"
     CDS             39..1001
                     /gene="Nubp1"
                     /note="NBP 1; nucleotide binding protein 1 (MinD homolog,
                     E. coli); nucleotide-binding protein 1"
                     /codon_start=1
                     /product="cytosolic Fe-S cluster assembly factor NUBP1"
                     /protein_id="NP_001009619.1"
                     /db_xref="GeneID:287042"
                     /db_xref="RGD:1310514"
                     /translation="MEGAPHGCPGADSAQAGRGASCQGCPNQKLCASGAGAAPDPAVE
                     EIREKMKTVRHRILVLSGKGGVGKSTFSAHLAHGLAEDGDTQVALLDIDICGPSIPKI
                     MGLEGEQVHQSGSGWSPVYVEDNLGVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDV
                     DWGDVDYLVIDTPPGTSDEHLSVVQYLAAAHIDGAVILTTPQEVALQDVRKEISFCHK
                     VKLPIIGVVENMSGFICPKCKRESQIFPPTTGGAEAMCQALKIPLLGKVPLDPHIGKS
                     CDKGQSFFVEAPDSPATAAYKSIIQRIREFCNSRQSHDENLISP"
     exon            58..162
                     /gene="Nubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            163..296
                     /gene="Nubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            297..365
                     /gene="Nubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            366..398
                     /gene="Nubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            399..489
                     /gene="Nubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            490..644
                     /gene="Nubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            645..755
                     /gene="Nubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            756..858
                     /gene="Nubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            859..942
                     /gene="Nubp1"
                     /inference="alignment:Splign:2.1.0"
     exon            943..2142
                     /gene="Nubp1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagattccgg tgagcgcagc ccgggcaaga gctgcagcat ggagggggcg ccccacggct
       61 gccccggggc cgatagcgcc caggcgggcc gaggagcttc ttgccaggga tgccccaacc
      121 agaagttgtg cgcatccgga gccggcgccg caccggaccc ggctgtggag gaaatcagag
      181 agaagatgaa gacggtgaga cacaggatct tggtgctgtc tgggaaaggc ggcgttggga
      241 aaagcacatt cagtgcccac ctcgcccacg gcctggcaga ggatggagac acacaggttg
      301 ctcttctgga catcgacatc tgtgggccat cgatccccaa gatcatgggc ttagaaggag
      361 agcaggttca ccagagtggc tccggctggt ctccagtgta tgtggaggac aacctggggg
      421 tgatgtctgt gggcttcctg ctcagcagcc cggatgatgc tgtcatctgg aggggaccaa
      481 agaaaaacgg tatgatcaag cagttcctcc gagacgtaga ctggggagac gtggactacc
      541 tcgtcataga caccccaccc ggcacgtccg atgagcacct ctcggtggtc cagtatctgg
      601 ctgccgcaca cattgatggg gcggtgatcc tcaccacccc tcaggaggtg gccctccagg
      661 atgttcggaa agagatcagt ttctgtcaca aggtgaagct gcccatcatt ggtgtggtag
      721 agaacatgag tggtttcatc tgccccaagt gcaagagaga gtctcagatc ttccctccca
      781 ccactggggg tgcagaggcc atgtgccagg ccctgaagat ccctcttctg ggcaaagtgc
      841 cgctggatcc acacataggc aagagctgtg acaaaggcca gtcttttttt gttgaagccc
      901 cagattcacc agccacagca gcctacaaaa gtataattca gaggatccga gagttttgta
      961 attctcgtca gtcacatgat gagaacctca tcagcccctg aagtgggaca gagccaagtg
     1021 ccacctccta accacagcgc cagcgggtca cgtgtccagc cacacctggt cagcaggaga
     1081 caggtggtgc cacagccacc agatgctgac aggatttgaa gtcacttatt aagactctat
     1141 aatcacctat ctgcatattt ccttaagatc aaaggtacag gcactctgca tccaggtgcc
     1201 attcatcaga aaataaaaat gtctccttga acctgtcccc tagggcctgt tttctggaac
     1261 ccaagggact atgaagcttc tgagtcacag gactgtttct gcctcaggtg ataagcctag
     1321 ggagagacga gggaggattg tggcctcagg agggagaatt gacaccaacc tctgcccaca
     1381 ctggggtctc cagctctggg aggtctccag tcatgctggg gtcagtgtga gtgctttcgc
     1441 tggggtccac caaacccctg aaaaagcttt taagtcaccc acgaggtgat gggtaccttc
     1501 aagacatctg gtaattcccg gtaaaaacca ctacctggca cttctgagag acaggtgtaa
     1561 ttgtccccat ggtctgagag ctgctgagag tcattccaga cttcactgca ctgtggcttg
     1621 acactggaag gtggggagcc cctcccctta ccgtatacat gcgaactctt gagtgtgctg
     1681 gagtccctgt ggagcaggtg caacctttcc aaaaagctcg actaggtcct gagcaggccc
     1741 taaacatcgg ggttctagct tagacttgct ttgggtcaac ttggaggact gggggagccc
     1801 acctagacct gtgcacaggt caagagctgc tttcccacga gttctcaggc ctctggcctg
     1861 cacctacctc tcacctaatg ctggtggatg tccagtcctt ccagcctggg cttctcaaag
     1921 tcacctgggg catcctgcaa ggcaagaaga tccatgactc tcccaacaaa gagtgggctc
     1981 cactgcacag actcagccac aagtattgtc gttcggaaca ctgcactaca agccaaagag
     2041 actcccctca ctgctgacaa ctgacaattg acaattactg agacagttat cccagaaata
     2101 tttcctggct tcaaaacaaa aggctttgcc attctttcct ta
//
