LOCUS       XM_006236550            1565 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 5'-nucleotidase, cytosolic IIIA
            (Nt5c3a), transcript variant X2, mRNA.
ACCESSION   XM_006236550
VERSION     XM_006236550.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006236550.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006236550.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1565
                     /gene="Nt5c3a"
                     /gene_synonym="Nt5c3"
                     /note="5'-nucleotidase, cytosolic IIIA; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 36 ESTs, 2 long SRA reads, 6 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 71 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:312373"
                     /db_xref="RGD:1312013"
     CDS             125..1018
                     /gene="Nt5c3a"
                     /gene_synonym="Nt5c3"
                     /codon_start=1
                     /product="cytosolic 5'-nucleotidase 3A isoform X2"
                     /protein_id="XP_006236612.1"
                     /db_xref="GeneID:312373"
                     /db_xref="RGD:1312013"
                     /translation="MTNQESAVRLEMMPEFQKSSVRIKNPTRVEEIICGLIKGGAAKL
                     QIITDFDMTLSRFSYNGKRCPTCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVDPVLT
                     VEEKFPYMVEWYTKSHGLLIEQGIPKAKLKEIVADSDVMLKEGYENFFGKLQQHGIPV
                     FIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL
                     KNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSY
                     DIVLVKEESLEVVNSILQKTL"
ORIGIN      
        1 gaaccgccct ccttgcacct tgtgctatat tagtgcttct cagacaggaa gaattttctt
       61 ttgctggtgc tgctgccgta catagcttgt ccggttacct tcagaaagat tggataagca
      121 cgaaatgact aatcaggagt ctgctgtccg tttggaaatg atgccagaat ttcagaaaag
      181 ctcagttcgt atcaagaacc caacgagagt agaagaaatt atctgtggtc tcattaaagg
      241 aggcgctgcc aaacttcaga taataaccga ctttgatatg actctaagta ggttctccta
      301 caatgggaaa agatgcccaa catgtcataa tatcattgac aactgtaagc tcgttacaga
      361 tgaatgtcga agaaagttac tgcagctaaa ggagcagtac tacgctattg aggttgatcc
      421 tgttctcacc gtggaagaga agttccctta catggtagaa tggtatacca aatcgcatgg
      481 tttgcttatt gaacaaggca taccaaaagc taaacttaaa gagattgtgg ctgactctga
      541 tgtcatgctc aaggaaggat atgagaattt cttcggtaaa cttcaacagc acggtatccc
      601 tgtgttcata ttttcggctg gtatcggtga cgtacttgaa gaagttatcc ggcaggctgg
      661 agtttatcac tcaaacgtca aagtagtgtc taacttcatg gattttgatg aaaatggagt
      721 gctgaaagga ttcaaaggag agctaattca tgtattcaac aaacatgatg gtgccctgaa
      781 gaatacagac tacttcagcc aactgaaaga caacagcaac atcattctgc tgggggactc
      841 ccaaggagac ttaaggatgg ccgatggtgt agccaacgtc gaacacattc tgaaaattgg
      901 ttatctgaat gacagagtag acgagctttt agaaaaatac atggactctt atgatattgt
      961 tttagtaaaa gaagaatcac tggaggttgt caactctatt ttacagaaga cattataaac
     1021 aagccactgt ggaagacttc tcccaggggt acacctgaat caggcattgt ccctcttgag
     1081 gaaagactct tatttataaa acagtcttgc tcctggtttc cccctttccc ccaacaaagg
     1141 atcttgagtc gtgtggaacc tgtgaaccgc agcccctctt ccggcctccg tcactgtact
     1201 caccagattt tttttaaata attaaaaatg atcttaaggc caagattaaa agaatagctc
     1261 ccctttgcaa agtgaatttt ggtttggtgt tctgcagtgt ccgggcactc ccaggtgagt
     1321 gtggaggtgc acaggacgct gtctaggcac atggcgtcct gattttaacc actgctagct
     1381 tcgtaattgg ggtggactgt ggccgtatca gctcctgaaa ttgtgtttta tttggttatt
     1441 ttgtctggaa aaaatatttt ccaggaagtt gtatctgaaa acctgttggt atccacatca
     1501 ttaacattat aaatactctg tgtgaagcac tgaaaataaa cccaaaatgg aaagcttttt
     1561 taaga
//
