LOCUS       NM_001400916            3726 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus NOP2/Sun RNA methyltransferase family member 7
            (Nsun7), transcript variant 1, mRNA.
ACCESSION   NM_001400916 XM_006250946
VERSION     NM_001400916.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3726)
  AUTHORS   Harris,T., Marquez,B., Suarez,S. and Schimenti,J.
  TITLE     Sperm motility defects and infertility in male mice with a mutation
            in Nsun7, a member of the Sun domain-containing family of putative
            RNA methyltransferases
  JOURNAL   Biol Reprod 77 (2), 376-382 (2007)
   PUBMED   17442852
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000014.1.
            
            On Jan 28, 2022 this sequence version replaced XM_006250946.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360186.1743851.1,
                                           SRR26643293.56921.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-420               JAXUCZ010000014.1  42288539-42288958   c
            421-837             JAXUCZ010000014.1  42287839-42288255   c
            838-896             JAXUCZ010000014.1  42285419-42285477   c
            897-1027            JAXUCZ010000014.1  42284832-42284962   c
            1028-1180           JAXUCZ010000014.1  42264438-42264590   c
            1181-1364           JAXUCZ010000014.1  42263920-42264103   c
            1365-1575           JAXUCZ010000014.1  42262112-42262322   c
            1576-1719           JAXUCZ010000014.1  42256207-42256350   c
            1720-1821           JAXUCZ010000014.1  42255667-42255768   c
            1822-1939           JAXUCZ010000014.1  42250440-42250557   c
            1940-2063           JAXUCZ010000014.1  42236140-42236263   c
            2064-3726           JAXUCZ010000014.1  42233998-42235660   c
FEATURES             Location/Qualifiers
     source          1..3726
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p11"
     gene            1..3726
                     /gene="Nsun7"
                     /gene_synonym="RGD1310137"
                     /note="NOP2/Sun RNA methyltransferase family member 7"
                     /db_xref="GeneID:305339"
                     /db_xref="RGD:1310137"
     exon            1..420
                     /gene="Nsun7"
                     /gene_synonym="RGD1310137"
                     /inference="alignment:Splign:2.1.0"
     exon            421..837
                     /gene="Nsun7"
                     /gene_synonym="RGD1310137"
                     /inference="alignment:Splign:2.1.0"
     CDS             525..2690
                     /gene="Nsun7"
                     /gene_synonym="RGD1310137"
                     /note="isoform 1 is encoded by transcript variant 1;
                     Williams-Beuren syndrome critical region protein 20;
                     NOL1/NOP2/Sun domain family, member 7; putative
                     methyltransferase NSUN7"
                     /codon_start=1
                     /product="putative methyltransferase NSUN7 isoform 1"
                     /protein_id="NP_001387845.1"
                     /db_xref="GeneID:305339"
                     /db_xref="RGD:1310137"
                     /translation="MLDPNSAMDFFDQENMEELSQLASLEMSGDLVSKRKPSAALEKS
                     SYPDSVYVTAANIFQGIRIQRPADKVIINYGDELLPSSWTQAEEDSFQRLSYELAFST
                     LKYQDILESILIDTDIFSSTTIPDQLNSLIIVMLYDFQDRKFQPRVLPNDAVTIPEVQ
                     EVENLLNSFKTKLAAALARCRIKHDALSIYHILPETVRKQEQRASTLPLYAWINIGKV
                     SLEEVYDDLRKKGFDKVKSIAYLNDKVFAVDQHCFNVLIFPSHFKRELLNIDLIKDYK
                     LIFQDKSRSLAVHSVKALINMDDDILMVNTGSWYTVAHMSILTSGNTSKIFVCGIESE
                     EKDSDAKKLFTKMGCENIEILHETFLSIEPKDQRLQNVKVILLLPRCSSLGVSNPVEF
                     ILNEHEDTSLLQDLSQGGLPKDKLQIFAQQQFEQLTHAMKFAKAQAIVYCTCSVSEEE
                     NEEVVKKALEFQSPALKLQPYRLSPPVLPLCSLKEIELSMDRFFRLEPSDITNGCFLS
                     ILTRERDPSETVSVKDVLARAAAKGLLDGVEVGKTLKRDKKRKKAKAPLPKAPPQADL
                     AHDHSSVTGADNSIQMKITEFLHRESKASAVKTPLPAKPVPQVAASSQIRKPSKPLST
                     PLVRTTRPSEKAGSFGRPRPEGKGIPLKPVEIILPPVTFPFSSPQGPRFQMPGTHFYY
                     RFIGSKVGVPSHLTSMSRRKEKAKESVPSSFVRHPRPWL"
     exon            838..896
                     /gene="Nsun7"
                     /gene_synonym="RGD1310137"
                     /inference="alignment:Splign:2.1.0"
     exon            897..1027
                     /gene="Nsun7"
                     /gene_synonym="RGD1310137"
                     /inference="alignment:Splign:2.1.0"
     exon            1028..1180
                     /gene="Nsun7"
                     /gene_synonym="RGD1310137"
                     /inference="alignment:Splign:2.1.0"
     exon            1181..1364
                     /gene="Nsun7"
                     /gene_synonym="RGD1310137"
                     /inference="alignment:Splign:2.1.0"
     exon            1365..1575
                     /gene="Nsun7"
                     /gene_synonym="RGD1310137"
                     /inference="alignment:Splign:2.1.0"
     exon            1576..1719
                     /gene="Nsun7"
                     /gene_synonym="RGD1310137"
                     /inference="alignment:Splign:2.1.0"
     exon            1720..1821
                     /gene="Nsun7"
                     /gene_synonym="RGD1310137"
                     /inference="alignment:Splign:2.1.0"
     exon            1822..1939
                     /gene="Nsun7"
                     /gene_synonym="RGD1310137"
                     /inference="alignment:Splign:2.1.0"
     exon            1940..2063
                     /gene="Nsun7"
                     /gene_synonym="RGD1310137"
                     /inference="alignment:Splign:2.1.0"
     exon            2064..3726
                     /gene="Nsun7"
                     /gene_synonym="RGD1310137"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtacggacc cagctcctgg cttcctgctg ctgtacccgc taggttggct gcaagagccc
       61 ggggtggtcg cgagaagcgt cccctcaggg acccagagcc ttctttgagg gatcccgaga
      121 gccgagggcc ggtcctgagc agtgtccccc cggagcccga agacgcgctt gaggaggcag
      181 cgtttccctc agggacccga acgtagcggg cgcgggcgcc gagcgctttc ccccacgccc
      241 gaaccccgcg ggtggtgtgg ctgtacttga attaaacggc ctccgcgggc ggtcgcctcc
      301 cggggctccc gagggcctgg ttctgcctcc agcgccccaa gtacagaggt tgccgcgtct
      361 tcagccccag agccccgggg aaacatccca accttagaga agggcggatt cgcggagaag
      421 agaccatgct taagactaca aggatagcaa tctccctgga ccacctgaat tgaacctgaa
      481 gcttgagtta ttgacatcag gggcagttga catcagaggc aaacatgttg gatccgaaca
      541 gtgcaatgga cttttttgac caagaaaata tggaggagct ctcccaactc gcttccctag
      601 agatgtcagg ggatttagtt tccaagagaa aaccttcagc tgcgctagaa aaatctagct
      661 atccagactc cgtgtacgtt acggcggcaa acatttttca gggtattcga atccaaaggc
      721 cagcagacaa agtcatcata aattacgggg atgaactctt gccgtcctcc tggacccagg
      781 ccgaggaaga ttcttttcag cgtttgtcct atgagttggc tttcagtacc ctgaagtatc
      841 aagatatttt ggaaagtata ttaatagata ccgatatctt ctcaagtacc acaatcccag
      901 atcagttgaa cagccttatc attgtgatgc tgtatgattt ccaagataga aaatttcagc
      961 cccgtgtcct tcccaatgac gcagtgacca taccagaagt tcaagaagta gagaaccttc
     1021 ttaacagctt taagacaaag ttggctgcgg cattggcgag atgtcggatc aagcatgatg
     1081 ccctttcgat ttaccatatt ctgccagaga cagttaggaa acaggaacag cgggcctcga
     1141 ctttgcctct gtatgcttgg ataaatattg gtaaagtaag ccttgaagaa gtttacgatg
     1201 atctgaggaa aaaaggtttt gataaggtca agtcgatagc gtatctcaat gacaaggtct
     1261 ttgccgttga tcagcattgc ttcaatgtct taatttttcc atctcatttc aaaagagaac
     1321 ttttaaacat agatcttata aaagactata aactcatttt ccaggacaaa tctcgaagcc
     1381 ttgctgtcca ctctgtcaag gctttaataa acatggacga cgatatccta atggtcaaca
     1441 caggctcatg gtacacagtt gcccatatgt ccatcttaac aagtggcaac acctcgaaaa
     1501 tatttgtatg tggaatagaa tcggaagaga aggattctga tgcgaagaaa cttttcacaa
     1561 aaatgggatg tgaaaatatt gaaatacttc atgaaacatt tcttagcatt gaacccaaag
     1621 atcagcggtt acagaatgtt aaggtcattc tgttgctacc tcgctgttca agcctaggtg
     1681 ttagtaatcc agtggaattt attttaaatg aacacgaaga tacaagttta cttcaagatc
     1741 tttctcaggg tggtctacca aaagataaac ttcagatttt tgctcagcaa caatttgaac
     1801 agctaacaca tgcaatgaaa ttcgctaaag ctcaagcgat tgtttactgt acatgttctg
     1861 tttctgaaga ggaaaatgaa gaagttgtta agaaagcact ggaatttcaa agcccagcac
     1921 ttaaactaca accttacaga ctcagtcctc ccgtgctccc gctgtgctcc ttaaaagaga
     1981 tagaactgtc tatggatagg tttttcagat tggagccatc tgatattacc aatggctgtt
     2041 ttctttctat cttaacaaga gagcgggacc catccgagac agtgtcagtg aaagatgttc
     2101 tggcccgggc ggcggccaaa ggtctactgg atggggttga ggttgggaag acactcaaac
     2161 gggacaagaa aaggaaaaaa gcaaaagccc cactgcccaa agcccctccc caggcggacc
     2221 tggctcacga ccattcgtca gtgactggcg ccgataacag catccaaatg aaaatcactg
     2281 agttcctgca tcgagaaagc aaagccagtg cagtgaaaac gcctctccct gcaaaacccg
     2341 tgcctcaagt ggctgcctcc tcccagatca gaaagcccag caagccttta tcgaccccac
     2401 tggtgaggac caccaggccg tcagaaaagg cgggaagctt tgggagacct cggccagaag
     2461 gcaaagggat tcctctgaaa ccggttgaaa tcattctgcc tccagtgacg ttcccattct
     2521 cgagccccca gggacccagg tttcagatgc caggcaccca tttttattac cgcttcattg
     2581 gatcaaaggt tggtgtgccc agccatctta catcaatgtc cagaagaaag gagaaggcta
     2641 aggagagcgt accttcctcc ttcgtcaggc atcctagacc atggctctga ctgtgtggcc
     2701 ctcgtgacag ggtggctggg ctttgtccac gtttagacac tgttacataa gatactggtg
     2761 cttttggtca cttagtaccc tccaatgcaa tagaacattt ggagagagaa tgaggacaga
     2821 tgagggtaac actggagggg ctgagtgagc aaagctaagg cttcctcagc tcagcgctaa
     2881 taagctcttt caggaagtcc agttgcagac cagatcagct gttaggcctt gtctcactct
     2941 ggggaggttt gaagtgtggg cggagcatgg ctgtcttacc tgaagggaac ccaggatccc
     3001 tgccagtagg ctgacttgca gacttcactg aggggcttgg tagagtcctg agataaatgc
     3061 tgttctttcc agcctgctcc agctctagcc aggaagccga gaccatgcct tagccgggca
     3121 gttgctgtag ctgaaacctc ctgaatccca gttgaggcct tttctgcaag catccccctg
     3181 ctcccgagac agggcatgcc aggaggctct ctagtagact gacctttgag tggagtagga
     3241 agcacaggaa accccaagtg ccagatgtgc acagtccaga tgttcattca gaagaaaaga
     3301 aaggtttctg gagacgctcc ataatcccga gcagactgag catgacaatc cctcccttct
     3361 gtttatgcca aattttgttg gagaagggac agggagcacg ttcccaccta aggattctga
     3421 gctgtagaat agaagtgaca tatcatttaa ggaactcagg tttctgactc tgtgctgaga
     3481 tcaggtggca cagccgaatc ccacacaggt cattccagtg gcacacaggg atctgacctt
     3541 ggtgactcat ttctggtaca ttattagaat atactgtagc actgtgctaa ttacatcaaa
     3601 cgtcaactac tcttagcgat actcaccatt gcctagtaat actgacatga ttatcatttc
     3661 tgggtccgat tttttttcat catggcaaca gaaattgttt gacattaaat aaagttatga
     3721 ttacaa
//
