LOCUS       XM_017602022            2881 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus NAD(P) dependent steroid
            dehydrogenase-like (Nsdhl), transcript variant X2, mRNA.
ACCESSION   XM_017602022
VERSION     XM_017602022.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017602022.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017602022.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2881
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2881
                     /gene="Nsdhl"
                     /note="NAD(P) dependent steroid dehydrogenase-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 59 ESTs, 2 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 117 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:309262"
                     /db_xref="RGD:1359337"
     CDS             181..1146
                     /gene="Nsdhl"
                     /codon_start=1
                     /product="sterol-4-alpha-carboxylate 3-dehydrogenase,
                     decarboxylating isoform X2"
                     /protein_id="XP_017457511.1"
                     /db_xref="GeneID:309262"
                     /db_xref="RGD:1359337"
                     /translation="MVEQLLSRGYAVNVFDVRQGFDNPRVQFFIGDLCNQQDLYPALK
                     GVSTVFHCASPPSNSNNKELFYRVNSTGTKTVIETCKEAGVQKLILTSSASVVFEGVD
                     IKNGTEDLPYAMKPIDYYTETKILQERAVLDANDPKKNFLTAAIRPHGIFGPRDPQLV
                     PVLIDAARKGKMKFMIGNGKNLVDFTFVENVVHGHILAAEHLSRDAGLGGKAFHITND
                     EPIPFWTFLSRILTGLNYEAPKYHIPYRVAYYLAFLLSLLVMVLSPLIQIQTTFTPFR
                     VALAGTFHYYSCEKAKKLIGYRPLVTMDDAVERTVQSFHHLRKDK"
ORIGIN      
        1 acattatgaa ggaagctctg ctgatcgtgg gctcatatag ctcagtagaa aagggtggct
       61 ggtattcagc tggagttcgc tggttgccgg ttgcttgcaa gctgaggtct atcgtttgag
      121 tgtctaaacc cggctaagaa gtgcacagtg attggaggct ctgggttcct ggggcagcac
      181 atggtagagc agttgctatc gcgaggctat gctgtcaatg tatttgatgt ccgccaaggc
      241 tttgataacc ctcgggtgca gttcttcata ggtgacctgt gcaaccaaca ggacctgtac
      301 ccagctctca aaggtgtaag cacagttttc cactgtgcgt cacccccgtc aaacagtaac
      361 aacaaggagc tcttttatag agtgaattcc actggcacca agactgtcat tgaaacctgc
      421 aaagaggctg gagttcagaa actcatttta accagctctg ccagtgttgt ctttgagggt
      481 gtcgatataa aaaatggaac tgaagacctc ccttatgcca tgaagcccat tgactactat
      541 acagagacca agatcttgca ggaaagagca gtactggatg ccaacgaccc taagaagaat
      601 tttttaactg cagccattcg tcctcatggc atatttggcc caagagatcc ccagttggtc
      661 ccagtcttaa ttgatgcagc tagaaaaggc aaaatgaagt tcatgattgg aaatgggaag
      721 aacctggtgg acttcacctt cgtggagaat gtagttcatg gacacatctt agcagctgag
      781 cacctctctc gagatgcagg tctgggtggg aaggcatttc acatcaccaa cgatgagcca
      841 atccctttct ggacgttcct gtcccgcatt ctgacaggcc tcaattatga ggcccccaag
      901 taccacatcc cctacagggt ggcctactat cttgctttcc tgctatctct actggtaatg
      961 gtgctcagcc ctctcatcca aatccagaca acttttacac catttcgggt ggcactggct
     1021 ggaacattcc actattacag ttgtgagaaa gccaaaaagc tcattgggta ccggccactg
     1081 gtcaccatgg atgatgctgt ggaaaggact gtgcagagtt tccaccacct gcggaaggac
     1141 aagtgaagct ccccagtgcc ctcaccagta actttctcct ctctgttcta aagaaccaat
     1201 atccctaagt gagtttcttc tgagctgcat gccccttgct ggttagatga cagcatactt
     1261 gactccctct atgatattgg aggtgacaac aacaggagac atttctccca gaatagcatt
     1321 ggacttctca ggcagactca cagtctactg ttttggtctt tctctctcct ccccctactt
     1381 ctgtctcctg ggttcattat cagaaagata atactaaagt gaaagctttg tttaaggtct
     1441 taaaaattga agaaaatcag aaattgtaaa gacagtaaga cttcagacat acattttata
     1501 agatcacagt acaatagtta gaagtactga tgagtgtatt cccaatccct ggtccctaag
     1561 gctaaatcca ctgcttgttc cttgctccct cgtatactct caaggtctct ttcaaagatg
     1621 gttgcagtgt ttgtctccat tgtttttcca taaagtattt ccatttatcc acagaatctg
     1681 gtggtcttta ttgctcagtg gtaatgcaat gcaatggcac agtgtgtgct gtgttagctg
     1741 gtcagctcct aattcatagg agatgttgga ctgcttggca ataatccaaa gagagtggcc
     1801 tccttcattg ctatgatgtt tgagtagaaa ctcctccatg agatggtgca aaacaggcta
     1861 cagacacctt tgcagctcac ttcacagaac attatcaggc caccttctaa agagtacagg
     1921 ccactaacaa tccagctatt tctgttctct gaactcagtc aaatgtattc ttgaaaaatt
     1981 ctaagctctt cttcatcact cttcaaaagt aagaagatga ttggaagaaa atacaacaag
     2041 gagataaaag tcatacagtt tgtgctgctg gcttattagc tctgcatggg gaggggccat
     2101 ggtaagttgc caaggcattc agatataaat gtaattaaga tgccatgttt gcttgcagta
     2161 atgaagttat aatcagaaac tgctaaagta tgataaaaac agtgattgtt tatgcactta
     2221 tggaagacaa agtgaagtga tgtggtttct tcagaacagg tgatgcactg aggtcggacc
     2281 ttgaaggatg gagagatggt cactgagtgc atttctgact aaagatgtca gtctcatagt
     2341 cagcagcatg tgcttcttgg ctgtatacaa cttcagttca gtagaggaca caagtgggaa
     2401 agccagcttg ggaagcagta ggacattggt caggctaaag agggaggcag ggaataacct
     2461 ttactctgta gataaagaca acctgcgatg tttcatacaa ttaaagatgt tctcaatgga
     2521 gcggaaagat caagaaaatc ctcctgagta ctctacatgg gagaccagag agtaacagca
     2581 taacaatgag ttagaaatag aagtacacag aaagaagatg cacctcagat ggtaacaaag
     2641 cttgagagtt gctcagaact gctggctaag aaggcaatag ggcaagctaa caaaccctga
     2701 gacccaaatg ccttaaaact ccctcaaaaa tgttaacagc acttggacca aaaatgaccc
     2761 ttgtcaatct caggtgtcca atgtgttctt cttccttctc ctttgtaagc cttcttgtca
     2821 ctgtaacaaa atacctgaaa taaacaattt gagaaaagga aatgttcttt aaagaactta
     2881 a
//
