LOCUS       NM_001135006             620 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus neuritin 1-like (Nrn1l), mRNA.
ACCESSION   NM_001135006
VERSION     NM_001135006.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 620)
  AUTHORS   Fujino,T., Wu,Z., Lin,W.C., Phillips,M.A. and Nedivi,E.
  TITLE     cpg15 and cpg15-2 constitute a family of activity-regulated ligands
            expressed differentially in the nervous system to promote neurite
            growth and neuronal survival
  JOURNAL   J Comp Neurol 507 (5), 1831-1845 (2008)
   PUBMED   18265009
REFERENCE   2  (bases 1 to 620)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000019.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582424.1808266.1,
                                           SRR26360190.3066305.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-98                JAXUCZ010000019.1  50696281-50696378
            99-213              JAXUCZ010000019.1  50697081-50697195
            214-620             JAXUCZ010000019.1  50697335-50697741
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q12"
     gene            1..620
                     /gene="Nrn1l"
                     /note="neuritin 1-like"
                     /db_xref="GeneID:100189544"
                     /db_xref="RGD:2301010"
     exon            1..98
                     /gene="Nrn1l"
                     /inference="alignment:Splign:2.1.0"
     CDS             11..499
                     /gene="Nrn1l"
                     /codon_start=1
                     /product="neuritin-like protein precursor"
                     /protein_id="NP_001128478.1"
                     /db_xref="GeneID:100189544"
                     /db_xref="RGD:2301010"
                     /translation="MMCYCCHCHWRRRCQRLPCALTLLLLLPLAVASEGPNRCETIYQ
                     GFAECLIRLGDGMGRGGELQTVCRSWNEFHACASRVLSGCPEEAAAVWESLQQEARRA
                     PHPDNLHILCGAPVSVRERIAGPETNQETLRATAPALASAPAPALLAAALALACLLGP
                     LA"
     exon            99..213
                     /gene="Nrn1l"
                     /inference="alignment:Splign:2.1.0"
     exon            214..620
                     /gene="Nrn1l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acagccaggg atgatgtgct actgctgcca ctgccactgg cgccgccgct gtcagcggct
       61 accctgtgcc ctgacactgt tgctgctact gccactcgca gtggcctctg agggcccaaa
      121 ccgctgtgag accatatacc aaggctttgc tgaatgtctc atccgcctgg gggatggcat
      181 gggccgagga ggcgagctac agaccgtctg cagatcctgg aatgaattcc acgcctgtgc
      241 ctctcgggtc ctgtcaggct gcccagagga ggctgctgca gtgtgggagt cactgcagca
      301 agaagctcgc cgtgccccac acccagataa cttgcacatc ctctgtggcg ctcctgtgag
      361 tgttcgggag cggattgctg gcccagagac caaccaggag acactacggg ccacagctcc
      421 tgccctggct tcagccccag cccctgcgtt gctcgctgct gctctggcgc ttgcctgcct
      481 cctggggcct ctggcctaaa cagtctggtt ggccagccaa cagtgccctt gcctcccatc
      541 actgcatgca gtgagtggct gccatgtgag ctctgcagaa tatgcacact tttcattaaa
      601 ggtatttata tttacaacaa
//
