LOCUS       XM_039096113            1394 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus neuritin 1 (Nrn1), transcript variant
            X1, mRNA.
ACCESSION   XM_039096113
VERSION     XM_039096113.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1394
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1394
                     /gene="Nrn1"
                     /gene_synonym="Nrn"
                     /note="neuritin 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 39 ESTs, 15 long
                     SRA reads, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 96 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:83834"
                     /db_xref="RGD:621586"
     CDS             16..399
                     /gene="Nrn1"
                     /gene_synonym="Nrn"
                     /codon_start=1
                     /product="neuritin isoform X1"
                     /protein_id="XP_038952041.1"
                     /db_xref="GeneID:83834"
                     /db_xref="RGD:621586"
                     /translation="MQIAYLVQAVRAAGKCDAVFKGFSDCLLKLGDSMANYPQGLDDK
                     TNIKTVCTYWEDFHSCTVTALTDCQEGAKDMWDKLRKESKNLNIQGSLFELCGSGNGA
                     AGSLLPALSVLLVSLSAALATWLSF"
ORIGIN      
        1 ccagaggtgg acggaatgca aatagcttac ctggtgcagg ccgtgagagc agcaggcaag
       61 tgcgatgcag tctttaaggg cttttcagac tgtttgctca agctgggtga cagcatggcc
      121 aactacccgc agggcctgga cgacaagacg aacatcaaga ccgtgtgcac atactgggag
      181 gatttccaca gctgcacggt cacagctctt acggattgcc aggaaggggc gaaagatatg
      241 tgggataaac tgagaaaaga atcgaaaaac ctcaatatcc aaggcagctt attcgaactc
      301 tgcggcagcg gcaacggggc ggcggggtcc ctgctcccgg cgctttccgt gctcctggtg
      361 tctctctcgg cagctttagc gacctggctt tccttctgag cacggggccg ggtcccccct
      421 ccgctcaccc acccacactc actccatgct cccggaaatc gagaggaaga gccattcgtt
      481 ctctaaggac gttgtgattc tctgtgatat tgaaaacact catatgggat tgtgggaaat
      541 cctgtttctc tctttttttt ttttaatttt ttttttattt tggttgagtc cttgtgtttt
      601 agttgccaaa tgttaccgat cagtgagcaa agcaagcaca gccaaaatcg gacctcacct
      661 taagtccgtc ttcacacaaa aataagaaaa cggcaaactc acccccattt ttaattttgt
      721 ttttaatttt acttacttat ttatttattt attttttggc aaaagaatct caggaatggc
      781 cctgggccac ctactatatt aatcatgttg ataacatgaa aaatgatggg ctcctcctaa
      841 tgagaaagcg aggagaggag aaggccaggg gaatgagctc aagagtgatg cccacgtggg
      901 gagcatctgg tgaataatcg ctcacgtctt tcttccacag taccttgttt tgatcatttc
      961 cacagcacat ttctcctcca gaaacgcgaa aaacacaagc gtgtgggttc tgcattttta
     1021 aggataagag agagaaagag gttgggtata gtaggacagg ttgtcagaag agatgctgct
     1081 atggtcacga ggggccggtt tcacctgcta ttgtcgtcgc ctccttcagt tccactgcct
     1141 ttatgtcccc tcctctctct tgttttagct gttacacata cagtaatacc tgaatatcca
     1201 acggtatagt tcacaagggg gtaatcaatg ttaaatctaa aatagaattt aaaaaaaaaa
     1261 gattttgaca taaaagagcc ttgattttaa aaaaaaagag agagatgtaa tttaaaaagt
     1321 ttattataaa ttaaattcag caaaaatttg ctacaaagta tagagaagta taaaataaaa
     1381 gttattgttt gaaa
//
