LOCUS       XM_006237431            2672 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus nuclear receptor interacting protein 2
            (Nrip2), transcript variant X1, mRNA.
ACCESSION   XM_006237431
VERSION     XM_006237431.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006237431.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006237431.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2672
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2672
                     /gene="Nrip2"
                     /note="nuclear receptor interacting protein 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 ESTs, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 100 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:689619"
                     /db_xref="RGD:1589959"
     CDS             907..1620
                     /gene="Nrip2"
                     /codon_start=1
                     /product="nuclear receptor-interacting protein 2 isoform
                     X1"
                     /protein_id="XP_006237493.1"
                     /db_xref="GeneID:689619"
                     /db_xref="RGD:1589959"
                     /translation="MSTGQEARRDEGDSRKEQEASIRDRAHLSQQRRLKQATQFLHKD
                     SADLLPLDSLKRLGTSKDLQPHSVIQRRLVEGKQRRLQGESPLLQALIRGHDSSRTSA
                     TQVPALLVNCKCQDQMLRVAVDTGTQHNQISAGCLRRLGLGKRVPQAPGGDLAPESTS
                     QVEQVELELGQETVACSAQVVDVDSPEFCLGLQTLLSLKVRCPCLGLTQNARTDRRLR
                     VEAPIRLARLRGAKNSELA"
ORIGIN      
        1 acataacaag gacaggaggg gaccaaggtg agttatggac taacctagtt ggagagagta
       61 ctaggcccag aatggtcccc agacttcatc atcgtatcac agggacttca gcctctaata
      121 aggaaaatct cagagctgtg tattactaca gcatgcctga tcttgttgca attcgagagg
      181 agatattggg accatctgac agggagaggt caagcacgga aggtgtctga tggctgacgg
      241 aggaaaactg agtagggcac tttcatcctg tccctctctg gccagcacct caaacccttc
      301 agcaaagggc agcagcagga ggaaagcgct gggtgtctga ctgtctggag actggaagga
      361 gctcagcaga gccagcccac aaacagacaa gagacagggg cttgcctgcc tccccacaca
      421 taaccaaaca tgcagcccac acaatggcac tcacccctct ctgatgactt ggcacaacct
      481 cctgacagtc acacacacac acacacacac acacacacac acacacacac acacacacac
      541 acacacacac acacacacac acacacacgc catccaccgc ccactctgag taggacccca
      601 gagctgcggg gttttgcagc ctaccagctg caggccctgc cagccctccc tctcctctaa
      661 ggctgggttt ttccagccgg aacctcgctc cctccctcta ctgcaatctt tggaaaccgg
      721 tgtctgacgc ggcggttccc gcctattatt tatttatttc ttcttttctc cctgctgaga
      781 ccctcctgtc agagggagag ccgcagtccg gagacagaga aaggcagaag ctacaggagg
      841 agctgggagc caaagagagg tggagagaga ctcccataca cccctgtctg ctttccacag
      901 aggaccatga gcactgggca agaggccagg agagatgagg gagactctag gaaagaacag
      961 gaagcctcga ttcgggaccg agcccacctg agccagcagc gccgactcaa acaggccacc
     1021 cagttcttgc acaaggactc ggctgacctg ctgcccctgg acagcctcaa gaggttaggc
     1081 acctctaagg acctgcagcc acacagtgtg atccaaagac gcctggtgga gggaaagcag
     1141 aggcggcttc agggggagtc ccccctgctg caggctctga tccgtggcca tgacagcagc
     1201 aggaccagtg cgacacaggt tccagctctt cttgtcaact gcaagtgcca ggaccagatg
     1261 cttcgtgtgg ctgtggacac agggacccag cacaatcaga tatctgctgg atgcctcagg
     1321 cgcctggggt taggaaagag ggtcccccaa gccccaggtg gggatctggc acctgagtca
     1381 acaagtcagg tggaacaggt ggagctggag ctggggcagg agacggtggc atgctcggcc
     1441 caggtggtgg atgtggacag tcctgaattc tgcctgggac tgcagactct gctttccctc
     1501 aaggtaaggt gtccatgctt gggcctgacc caaaatgcta ggacagatag aaggctcagg
     1561 gtggaagccc caatcagact ggcaagactg agaggtgcta aaaactcgga acttgcttaa
     1621 ttatccccaa aaggaaaatg aaatgggttc attccccctc tgatggggca ggggcatggg
     1681 agtagcggga ggcaaaaggg agcaggtatg agctagcagg gaggtgacca cacatccgcg
     1741 gtccccacgg cagtgctgca ttgacctgga ccgtggagtg cttcggctga aagccccctt
     1801 ctcggagctg cccttcctgc ctctgtatca agagcctggc cagtgaccac tgtctcagcc
     1861 agtccctagg gcaacaccgt gccttaggga agagtggtgt ggagtgggta ttacctgagc
     1921 agggcatctg gagaccactg cattaatctc tttactcacc accctgatcc cgcagtaggc
     1981 cacctttctt ctgcttctcc atcgctgccc tctgccctag gaactcctac cgagagtact
     2041 gtgactctga ggtcctggct tccccaatct ctcttatccc ttaccaagtg cacaacccag
     2101 tcacttatag aaagggacct ccagaaaatg ggctctagac tttaccctgg ctgtgggggt
     2161 caaagttacc tgctgcctcc accagcctga agtccacccc aagctggccc tcctgacaca
     2221 tgtactcatc tgcttacagc tggggagggg ggacacaagt agggctgttg gttaggaagg
     2281 cagtccctga gctgagggcc tgtagtcagt actctttctg ggtggcagat gtctgagtgt
     2341 ctttctggct gagctgactc tcaagtctta ggggaagaga gacaatattt ctaacccaaa
     2401 ccagggaact gggcccctta cgtgggaact caatacaaag cctatgtgga ccaaagagga
     2461 accagcacac aaagtgtcac tttcttcact ttcaaaagca ctctgggtgc tgggtgtggg
     2521 gctcctcgtc tcaatcccga ctccctccct cattgcagtg ctttgagaca agctccctcc
     2581 cagtctgcct cctcctgcac cattagaggc agaccagccc agggcaggcc cttggcctgc
     2641 ttccgcattt gaataaacaa tgtttctcta ag
//
