LOCUS       XM_006243921            1152 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus neurotrophin receptor associated death
            domain (Nradd), transcript variant X1, mRNA.
ACCESSION   XM_006243921
VERSION     XM_006243921.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006243921.4.
            
            On Jan 21, 2021 this sequence version replaced XM_006243921.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1152
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1152
                     /gene="Nradd"
                     /gene_synonym="NRH2; PLAIDD"
                     /note="neurotrophin receptor associated death domain;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 6 ESTs, 6 long SRA reads, 1
                     Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 93 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:246143"
                     /db_xref="RGD:708524"
     CDS             427..966
                     /gene="Nradd"
                     /gene_synonym="NRH2; PLAIDD"
                     /codon_start=1
                     /product="death domain-containing membrane protein NRADD
                     isoform X1"
                     /protein_id="XP_006243983.1"
                     /db_xref="GeneID:246143"
                     /db_xref="RGD:708524"
                     /translation="MLHNVSKGVVYSATVVLGLLAYVAFKCWRSRKQRQQLAKARTVE
                     LGDPDRDQRHGDSSVFVDSPHGLEPCIPSQGPHADLGCRLYLHIPQQQQEEVQRLLIL
                     GEPAKGWQGLAGQLGYQAEAVETMACDQDPAYALLRDWAAQEGSGATLRVLEDALTAI
                     GREDVVQVLSSPAEGCSVV"
ORIGIN      
        1 ctggctcctg gctccaggtt ttcagctctc gccgtccatc gcgtggcgtt tgcatgccat
       61 tggcgcgctc tgcctaccgg gctggtgtct gctgcttctg tgcgctccga gtgcttctgc
      121 gtgctccggc gtggggcggg ggcgggaccg cgccctcgag ctcagccccg cctcttcatt
      181 gtcctgctcc cctcttcaac accacccccc cattggcccg ccccttgcct tggctcactc
      241 ttgggcagac cggaacctgc cctctccagg gactcccgtc gccttcctag ctgagtggat
      301 cctagcaccc ctggaggggt ggccgcagaa gagttccttc tggactcaga gaagcaggat
      361 ccaggctcca tcagctcagt tcccctccac caagaaacag cccagcgagc agtacctggt
      421 ggcgccatgc ttcataacgt cagcaaaggt gtggtgtatt cagctactgt agtccttggt
      481 ctgcttgcct atgtggcctt caaatgctgg cgctcacgta agcaaagaca acagttggct
      541 aaagctcgga ctgtagagct gggggaccct gaccgggacc aaaggcatgg tgacagcagt
      601 gtcttcgtgg attctcctca tggtctggag ccctgtattc ccagccaggg accacatgca
      661 gaccttggct gccgacttta cctgcatatt ccacagcagc agcaggagga agtccagcgg
      721 ctcttgatat tgggggaacc tgccaagggc tggcaggggc tggcaggcca actgggctac
      781 caagctgaag ctgtggaaac catggcctgt gaccaggacc cagcctatgc cctgctaagg
      841 gactgggctg ctcaagaagg cagtggagca accctcagag tgctagaaga tgctctgact
      901 gccataggcc gagaagatgt ggtccaggtt ttgagctcac cagctgaggg ctgctctgtg
      961 gtgtgagtga cacatcccag ggcacttctc cagcttcaca aaagatccag ccacttcatt
     1021 ggggggatgg gtaagagcat ggggcatggc tttccccaca ggtcctcatt ctgcctcttt
     1081 atgtgctcca gctatttttt ctatttcttt ttaaaatcac gtattaaagg cacctttgga
     1141 ttttttgttc ta
//
