LOCUS       NM_001107806            2099 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus aminopeptidase-like 1 (Npepl1), mRNA.
ACCESSION   NM_001107806 XM_001055241 XM_006235688 XM_230892
VERSION     NM_001107806.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On or before Jan 12, 2022 this sequence version replaced
            XM_006235688.4, NM_001107806.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR21887623.3037029.1,
                                           SRR21887623.389008.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-222               JAXUCZ010000003.1  183312185-183312406
            223-408             JAXUCZ010000003.1  183312908-183313093
            409-579             JAXUCZ010000003.1  183313452-183313622
            580-669             JAXUCZ010000003.1  183315797-183315886
            670-751             JAXUCZ010000003.1  183316267-183316348
            752-894             JAXUCZ010000003.1  183317820-183317962
            895-972             JAXUCZ010000003.1  183321315-183321392
            973-1073            JAXUCZ010000003.1  183322467-183322567
            1074-1197           JAXUCZ010000003.1  183322804-183322927
            1198-1374           JAXUCZ010000003.1  183323176-183323352
            1375-1485           JAXUCZ010000003.1  183323658-183323768
            1486-2099           JAXUCZ010000003.1  183324131-183324744
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q43"
     gene            1..2099
                     /gene="Npepl1"
                     /note="aminopeptidase-like 1"
                     /db_xref="GeneID:311671"
                     /db_xref="RGD:1311351"
     exon            1..222
                     /gene="Npepl1"
                     /inference="alignment:Splign:2.1.0"
     CDS             73..1647
                     /gene="Npepl1"
                     /codon_start=1
                     /product="probable aminopeptidase NPEPL1"
                     /protein_id="NP_001101276.2"
                     /db_xref="GeneID:311671"
                     /db_xref="RGD:1311351"
                     /translation="MASVGLQFQASAGDADPQSRPLLLLGQLQHLHRVPWSHVRGKLQ
                     PRVTEELWQAALATLNPNPTDSCPLYLNCATVAALPSRVSRHNSPSAAHFITRLVRTC
                     LPPGTHRCILMVCEQPEVFASACALARAFPLFTHRSGASRRTEKRTVMVEFFLVGQDN
                     GPVEVSTLQCLTNATEGVRLAARIVDTPCSEMNTDIFLEEISQVGRELGITPTIIRDE
                     QLKTKGFGGIYGVGKAALHPPALAVLSHTPDGATQTIAWVGKGIVYDTGGLSIKGKTT
                     MPGMKRDCGGAAAILGAFRAAIKQGFKDNLHAVFCLAENAVGPNATRPDDIHLLYSGK
                     TVEINNTDAEGRLVLADGVSYACKDLGADIIVDMATLTGAQGIATGKYHAAVLTNSAE
                     WEAACVKAGQKCGDLVHPLVYCPELHFSEFTSAVADMKNSVADRDNSPSSCAGLFIAS
                     HIGFDWPGVWVHLDIAAPVHAGERATGFGVALLLALFGRASEDPLLNLVSPLDCEVDA
                     QEDDSVGRDSKRRRLV"
     exon            223..408
                     /gene="Npepl1"
                     /inference="alignment:Splign:2.1.0"
     exon            409..579
                     /gene="Npepl1"
                     /inference="alignment:Splign:2.1.0"
     exon            580..669
                     /gene="Npepl1"
                     /inference="alignment:Splign:2.1.0"
     exon            670..751
                     /gene="Npepl1"
                     /inference="alignment:Splign:2.1.0"
     exon            752..894
                     /gene="Npepl1"
                     /inference="alignment:Splign:2.1.0"
     exon            895..972
                     /gene="Npepl1"
                     /inference="alignment:Splign:2.1.0"
     exon            973..1073
                     /gene="Npepl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1074..1197
                     /gene="Npepl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1198..1374
                     /gene="Npepl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1375..1485
                     /gene="Npepl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1486..2099
                     /gene="Npepl1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggggcggcgc cgagccgggc cggagcaggg cgcagggtgc tgggccgccc ggccggggtc
       61 gcggggggga agatggcgag cgtggggctg cagttccagg cgagcgccgg ggacgcggac
      121 ccccagagcc ggcccttgct gctgttgggc cagctgcaac acctgcaccg cgtgccctgg
      181 agccacgtcc gcgggaagct gcagccccgg gtcaccgagg agctctggca ggcagctctg
      241 gccacgctca accccaaccc cacagacagc tgtcccctct acctgaactg cgccacagtg
      301 gcagctctgc cgtccagggt gagccggcat aacagccctt ccgccgccca cttcatcacc
      361 aggcttgtga gaacctgcct gcctcctgga acccaccggt gcatcctgat ggtctgcgag
      421 cagcctgagg tttttgcctc tgcctgtgcc ctggcaaggg ccttcccact cttcacacac
      481 cgctcagggg catccaggcg tacagaaaag aggacggtca tggtggagtt cttcctggtg
      541 ggacaagaca atggccccgt ggaagtgtcc accttgcaat gtttaaccaa tgccacggaa
      601 ggcgtccggc tagccgcacg cattgtggac acgccatgca gtgagatgaa cacagacatc
      661 ttccttgagg agattagcca agttggaagg gagctgggga tcacccccac catcatccgt
      721 gatgaacagc taaagaccaa aggattcgga ggaatctacg gggttggcaa agctgccctc
      781 cacccacctg cgctggccgt cctcagccac acccctgatg gggccacgca gaccattgcc
      841 tgggtgggca agggcattgt ctatgacact ggtggcctca gcatcaaagg gaagaccacc
      901 atgccaggga tgaagcggga ctgtgggggt gctgcagcca tcctgggagc cttcagagcc
      961 gccatcaagc agggtttcaa agataacctg cacgctgtgt tctgcttggc tgagaatgca
     1021 gtgggaccca atgccactag gccggatgac attcaccttt tgtattcagg aaagacggta
     1081 gagatcaaca acacggacgc tgagggcagg ctggtgctgg cagacggggt gtcttatgct
     1141 tgcaaagacc tgggtgctga catcattgtg gacatggcca ccctgacagg ggcacagggc
     1201 attgccacag ggaaatacca tgcagccgtg ctcaccaaca gcgccgagtg ggaggcggcc
     1261 tgtgtgaagg ctgggcagaa gtgcggggac ctggtccacc cgctggtcta ctgccctgag
     1321 ctgcacttca gcgagttcac ctcagctgtg gctgacatga agaactcagt ggcggaccga
     1381 gacaacagcc ccagctcctg tgccggcctc ttcatcgcct cacacattgg atttgactgg
     1441 cctggagtct gggtccacct ggacattgcc gccccagtgc atgctggtga gcgagccaca
     1501 ggcttcgggg tggctctcct cctggcccta tttggccgtg cctccgagga cccgctgctg
     1561 aacctggtgt ccccgttgga ctgtgaggtg gatgcccagg aagacgacag cgtggggcgt
     1621 gactccaaga gacggaggct cgtgtgagcg ctacttccca gctggtgaca cagggttcct
     1681 tacctcactt tgcactgact gagttcaagc aattgaaaga taactcttat gacgagtttg
     1741 gcttctcctt ctgtactcag tggttatggg agtgagccat tcttttctta gcagcggctt
     1801 aggggtttgg tggggtctgg agagaattgt cacagatccc ataggcctgc ctttgcctgc
     1861 tctgtccctt gtcctccacc ctggtcctta gaaccacctc aggtcaccct ctgtggtgag
     1921 cgcacttcct atataggtcc tagctctggc ctctgcttcc tgaggtgtcc agccagccca
     1981 tgccagggta cgtgtggtga ctggctgtta gggacccatt ctgtgaagca ggaagagcct
     2041 tgtagcccac ccccaacccc cagttcactt gaagttgaat taaatatggc cacaacata
//
