LOCUS       XM_017591629            1728 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus neural proliferation, differentiation
            and control, 1 (Npdc1), transcript variant X1, mRNA.
ACCESSION   XM_017591629
VERSION     XM_017591629.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017591629.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017591629.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1728
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1728
                     /gene="Npdc1"
                     /note="neural proliferation, differentiation and control,
                     1; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 35 ESTs, 2 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 126 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:296562"
                     /db_xref="RGD:1303156"
     CDS             385..1431
                     /gene="Npdc1"
                     /codon_start=1
                     /product="neural proliferation differentiation and control
                     protein 1 isoform X1"
                     /protein_id="XP_017447118.1"
                     /db_xref="GeneID:296562"
                     /db_xref="RGD:1303156"
                     /translation="MATPVPPPSPRHLRLLRLLLSGLILGAALNGATARRPDAPTCPG
                     SLDCALKRRAKCPPGAHACGPCLQSFQEDQRGVCVPRKHQSSGIVEGLGPLYMKAHHS
                     SGEGLPQPRLEEEIDSLARELALKEKEAGHPRLTAQPLPEASQKLLEPAATLGFSQWG
                     QQLEPGLPSTHGTSSPTPHTSLSARASSGPVQMSPLEPQGRGNGLALVLILAFCLAST
                     AALAVAALCWCRLQREIRLTQKADYTATAKGPTSPTTPRISPGDERLAHSAEMYHYQH
                     QRQQMLCLERHKDPPKELESASSDEENEDGDFTVYECPGLAPTGEMEVRNPLFDHSTL
                     SAPVPGPHSSPPLQ"
ORIGIN      
        1 atcctgggac gcccactgct agtcaatccc aagccagatt tcttggtaat gaggcaaact
       61 gctgtagaga ctagaggacg ggagacactc agccgccttt agaaaggggg ccccatcagg
      121 atgtagaggg aggggggctc cgactagaag agatgtcccg cccccgcagg tagagcgcgc
      181 aggcgcactt cggacacttt tctctggccg ccgcgcctcc atcccatccc ggatccattg
      241 ccgcaacgtc agcgccgccg cctcctcttt tcctcttcct cctccgcccc tctcgcttcc
      301 cggcttctcc agtcgcggtt cccggagtgg gtaccgagcc cggggccgtg gggtgccatg
      361 ctgcccgggt ggcggcgctg aagcatggcg acgcccgtcc ctccgccttc cccgcggcac
      421 ctgcggctgc tgcggctgct gctctccggc cttattctgg gagcggccct gaatggtgcc
      481 accgcccgcc gcccggatgc tcccacctgc cctggaagcc tggattgtgc actgaagagg
      541 cgggcaaagt gcccaccagg ggcacatgcc tgcggaccat gccttcagtc cttccaggag
      601 gaccagagag gggtctgtgt gccgaggaag caccaatctt ctggcattgt cgagggtctg
      661 gggcctctgt atatgaaggc ccatcactcc tcaggggagg gcctgcccca gcccagactg
      721 gaagaggaga tcgattctct ggcccgggag ctggcactga aggagaagga ggctgggcac
      781 ccaaggctca cagcacagcc cttgcctgag gcttcccaga agctcctgga acctgcagct
      841 accctgggat tctcacagtg gggtcaacaa ctggagcctg gcctcccctc tactcacgga
      901 acctcttcgc ccacacccca cacctccttg agcgcccggg catcctctgg gcctgtgcag
      961 atgtccccgc tggagcctca aggccgtgga aatggcctcg cccttgtact gatcctggcg
     1021 ttctgcttgg caagcacagc tgcactggct gtggcagccc tctgctggtg taggcttcag
     1081 cgagagatcc gcctgactca gaaggctgac tacactgcca cagccaaggg gcccacttca
     1141 ccaacaacac cacgaatctc gcccggggac gagcgtctgg cgcatagcgc agagatgtat
     1201 cattatcagc accagagaca gcagatgctg tgcctggagc ggcataagga ccctccaaag
     1261 gaactggagt cagcctcctc cgatgaggag aatgaagatg gtgacttcac tgtgtacgag
     1321 tgcccaggcc tggcgccaac aggggagatg gaggtgcgca atccactgtt tgaccattcc
     1381 acgctgtcag caccagtgcc tggtccccat tcctcaccac cactgcagtg actcctaggc
     1441 tgatgcccac agcccaccgg tggggacaag caagtcctgg tgttccccat ggaaaagaac
     1501 agcattgtga ccctctgcat gcttttggca ggagagaggc gccaacccct gggctccctt
     1561 gccagggaga ttctctgcct tatgtgggag atccagcatc tgcttgcata ttctctgtct
     1621 ggtctgaacc ctcaaactgg agatgcaagt ccaggaaccc tagagccgag gcatggatag
     1681 agagttctgg agataaaagc caattaaagt ctttttcaaa cctgtgaa
//
