LOCUS       NM_001004231            1386 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus neural proliferation, differentiation and
            control, 1 (Npdc1), mRNA.
ACCESSION   NM_001004231 XM_215992
VERSION     NM_001004231.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1386)
  AUTHORS   Evrard C and Rouget P.
  TITLE     Subcellular localization of neural-specific NPDC-1 protein
  JOURNAL   J Neurosci Res 79 (6), 747-755 (2005)
   PUBMED   15678517
  REMARK    GeneRIF: subcellular fractionation of rat brain showed that crude
            synaptic membrane and crude synaptic vesicle fractions were
            enriched in NPDC-1.
REFERENCE   2  (bases 1 to 1386)
  AUTHORS   Spencer ML, Theodosiou M and Noonan DJ.
  TITLE     NPDC-1, a novel regulator of neuronal proliferation, is degraded by
            the ubiquitin/proteasome system through a PEST degradation motif
  JOURNAL   J Biol Chem 279 (35), 37069-37078 (2004)
   PUBMED   15229225
  REMARK    GeneRIF: NPDC-1 has a role in regulating neuronal proliferation and
            is degraded by the ubiquitin/proteasome system through a PEST
            degradation motif
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079156.1.
            
            On Sep 10, 2004 this sequence version replaced XM_215992.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079156.1, SRR8487227.294721.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1386
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p13"
     gene            1..1386
                     /gene="Npdc1"
                     /note="neural proliferation, differentiation and control,
                     1"
                     /db_xref="GeneID:296562"
                     /db_xref="RGD:1303156"
     exon            1..176
                     /gene="Npdc1"
                     /inference="alignment:Splign:2.1.0"
     CDS             65..1060
                     /gene="Npdc1"
                     /note="neural proliferation differentiation and control
                     protein 1"
                     /codon_start=1
                     /product="neural proliferation differentiation and control
                     protein 1 precursor"
                     /protein_id="NP_001004231.1"
                     /db_xref="GeneID:296562"
                     /db_xref="RGD:1303156"
                     /translation="MATPVPPPSPRHLRLLRLLLSGLILGAALNGATARRPDAPTCPG
                     SLDCALKRRAKCPPGAHACGPCLQSFQEDQRGVCVPRKHQSSGEGLPQPRLEEEIDSL
                     ARELALKEKEAGHPRLTAQPLPEASQKLLEPAATLGFSQWGQQLEPGLPSTHGTSSPT
                     PHTSLSARASSGPVQMSPLEPQGRGNGLALVLILAFCLASTAALAVAALCWCRLQREI
                     RLTQKADYTATAKGPTSPTTPRISPGDERLAHSAEMYHYQHQRQQMLCLERHKDPPKE
                     LESASSDEENEDGDFTVYECPGLAPTGEMEVRNPLFDHSTLSAPVPGPHSSPPLQ"
     exon            177..323
                     /gene="Npdc1"
                     /inference="alignment:Splign:2.1.0"
     exon            324..464
                     /gene="Npdc1"
                     /inference="alignment:Splign:2.1.0"
     exon            465..635
                     /gene="Npdc1"
                     /inference="alignment:Splign:2.1.0"
     exon            636..702
                     /gene="Npdc1"
                     /inference="alignment:Splign:2.1.0"
     exon            703..790
                     /gene="Npdc1"
                     /inference="alignment:Splign:2.1.0"
     exon            791..870
                     /gene="Npdc1"
                     /inference="alignment:Splign:2.1.0"
     exon            871..967
                     /gene="Npdc1"
                     /inference="alignment:Splign:2.1.0"
     exon            968..1357
                     /gene="Npdc1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cccggagtgg gtaccgagcc cggggccgtg gggtgccatg ctgcccgggt ggcggcgctg
       61 aagcatggcg acgcccgtcc ctccgccttc cccgcggcac ctgcggctgc tgcggctgct
      121 gctctccggc cttattctgg gagcggccct gaatggtgcc accgcccgcc gcccggatgc
      181 tcccacctgc cctggaagcc tggattgtgc actgaagagg cgggcaaagt gcccaccagg
      241 ggcacatgcc tgcggaccat gccttcagtc cttccaggag gaccagagag gggtctgtgt
      301 gccgaggaag caccaatctt ctggggaggg cctgccccag cccagactgg aagaggagat
      361 cgattctctg gcccgggagc tggcactgaa ggagaaggag gctgggcacc caaggctcac
      421 agcacagccc ttgcctgagg cttcccagaa gctcctggaa cctgcagcta ccctgggatt
      481 ctcacagtgg ggtcaacaac tggagcctgg cctcccctct actcacggaa cctcttcgcc
      541 cacaccccac acctccttga gcgcccgggc atcctctggg cctgtgcaga tgtccccgct
      601 ggagcctcaa ggccgtggaa atggcctcgc ccttgtactg atcctggcgt tctgcttggc
      661 aagcacagct gcactggctg tggcagccct ctgctggtgt aggcttcagc gagagatccg
      721 cctgactcag aaggctgact acactgccac agccaagggg cccacttcac caacaacacc
      781 acgaatctcg cccggggacg agcgtctggc gcatagcgca gagatgtatc attatcagca
      841 ccagagacag cagatgctgt gcctggagcg gcataaggac cctccaaagg aactggagtc
      901 agcctcctcc gatgaggaga atgaagatgg tgacttcact gtgtacgagt gcccaggcct
      961 ggcgccaaca ggggagatgg aggtgcgcaa tccactgttt gaccattcca cgctgtcagc
     1021 accagtgcct ggtccccatt cctcaccacc actgcagtga ctcctaggct gatgcccaca
     1081 gcccaccggt ggggacaagc aagtcctggt gttccccatg gaaaagaaca gcattgtgac
     1141 cctctgcatg cttttggcag gagagaggcg ccaacccctg ggctcccttg ccagggagat
     1201 tctctgcctt atgtgggaga tccagcatct gcttgcatat tctctgtctg gtctgaaccc
     1261 tcaaactgga gatgcaagtc caggaaccct agagccgagg catggataga gagttctgga
     1321 gataaaagcc aattaaagtc tttttcaaac ctgtgaaaaa aaaaaaaaaa aaaaaaaaaa
     1381 aaaaaa
//
