LOCUS       XM_039099397            2826 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus NADPH oxidase 1 (Nox1), transcript
            variant X1, mRNA.
ACCESSION   XM_039099397
VERSION     XM_039099397.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039099397.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2826
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2826
                     /gene="Nox1"
                     /note="NADPH oxidase 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 3 ESTs, 3 long
                     SRA reads, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 6 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:114243"
                     /db_xref="RGD:620598"
     CDS             576..2075
                     /gene="Nox1"
                     /codon_start=1
                     /product="NADPH oxidase 1 isoform X1"
                     /protein_id="XP_038955325.1"
                     /db_xref="GeneID:114243"
                     /db_xref="RGD:620598"
                     /translation="MVILIPVCRNLLSFLRGTCSFCNHTLRKPLDHNLTFHKLVAYMI
                     CIFTAIHIIAHLFNFERYSRSQQAMDGSLASVLSSLFHPEKEDSWLNPIQSPNVTVMY
                     AAFTSIAGLTGVVATVALVLMVTSAMEFIRRNYFELFWYTHHLFIIYIICLGIHGLGG
                     IVRGQTEESMSESHPRNCSYSFHEWDKYERSCRSPHFVGQPPESWKWILAPIAFYIFE
                     RILRFYRSRQKVVITKVVMHPCKVLELQMRKRGFTMEIGQYIFVNCPSISFLEWHPFT
                     LTSAPEEEFFSIHIRAAGDWTENLIRTFEQQHSPMPRIEVDGPFGTVSEDVFQYEVAV
                     LVGAGIGVTPFASFLKSIWYKFQRAHNKLKTQKIYFYWICRETGAFAWFNNLLNSLEQ
                     EMDELGKPDFLNYRLFLTGWDSNIAGHAALNFDRATDVLTGLKQKTSFGRPMWDNEFS
                     RIATAHPKSVVGVFLCGPPTLAKSLRKCCRRYSSLDPRKVQFYFNKETF"
ORIGIN      
        1 ttttttggca gtgggggtgt ggttagtccc tcagtgttta ggtggaccat ttacaactgt
       61 gcctcagtct ttgttctctg cttgtgtgaa ctctgatgtt gagccagcag catggggtgc
      121 tgtcagagct ttacagagcc tctgggcatg cgcatggcta cccatttcat tgatttacag
      181 aagtcatgct aaaatctctt tcatgcatgt cttccttttt cagtctctcc tttcccaaag
      241 cttttcagtt tgccctttgc ttgtaccaac tgctatccct cctcaaaggc tgctgcaaaa
      301 ggtatgcctt tttcttggag gctttcagca aatactacct gggaacctgc ttcagctctt
      361 ggaatattta aagtgaagag aaacatttca tagcatttgt atctttcttt gaaggagcca
      421 ccagacaggt ttcttggttg gggctgaaca tttttctgtt tgtgtacgtc ttcctgaatt
      481 atgagaagtc tgacaagtac tattacacga gagaaattct cggaactgcc ttggccttgg
      541 ccagagcatc tgctttgtgc ctgaatttta acagcatggt gatcctgatt cctgtgtgtc
      601 gaaatctgct ctccttcctg aggggcacct gctcattttg caaccacacg ctgagaaagc
      661 cattggatca caacctcacc ttccataagc tggtggcata tatgatctgc atattcacag
      721 ctattcatat cattgcacat ctatttaact ttgaacgcta cagtagaagc caacaggcca
      781 tggatggatc tcttgcctct gttctctcca gcctattcca tcccgagaaa gaagattctt
      841 ggctaaatcc catccagtct ccaaacgtga cagtgatgta tgcagcattt accagtattg
      901 ctggccttac tggagtggtc gccactgtgg ctttggttct catggtaact tcagctatgg
      961 agtttatccg caggaattat tttgagctct tctggtatac acatcacctt ttcatcatct
     1021 atatcatctg cttagggatc catggcctgg gggggattgt ccggggtcaa acagaagaga
     1081 gcatgagtga aagtcatccc cgcaactgtt catactcttt ccacgagtgg gataagtatg
     1141 aaaggagttg caggagtcct cattttgtgg ggcaaccccc tgagtcttgg aagtggatcc
     1201 tcgcgccgat tgctttttat atctttgaaa ggatccttcg cttttatcgc tcccggcaga
     1261 aggtcgtgat taccaaggtt gtcatgcacc catgtaaagt tttggaattg cagatgagga
     1321 agcggggctt tactatggaa ataggacagt atatattcgt aaattgcccc tcgatttcct
     1381 tcctggaatg gcatcccttt actctgacct ctgctccaga ggaagaattt ttctccattc
     1441 atattcgagc agcaggggac tggacagaaa atctcataag gacatttgaa caacagcact
     1501 caccaatgcc caggatcgag gtggatggtc cctttggcac agtcagtgag gatgtcttcc
     1561 agtacgaagt ggctgtactg gttggggcag ggattggcgt cactcccttt gcttccttct
     1621 tgaaatctat ctggtacaaa ttccagcgtg cacacaacaa gctgaaaaca caaaagatct
     1681 atttctactg gatttgtaga gagacgggtg cctttgcctg gttcaacaac ttattgaatt
     1741 ccctggaaca agagatggac gaattaggca aaccggattt cctaaactac cgactcttcc
     1801 tcactggctg ggatagcaac attgctggtc atgcagcatt aaactttgac agagccactg
     1861 acgtcctgac aggtctgaaa cagaaaacct cctttgggag accaatgtgg gacaatgagt
     1921 tttctagaat agctactgcc caccccaagt ctgtggtggg ggttttctta tgcggccctc
     1981 cgactttggc aaaaagcctg cgcaaatgct gtcggcggta ctcaagtctg gatcctagga
     2041 aggttcaatt ctacttcaac aaagaaacgt tctgaattgg aggaagccgc acagtagtac
     2101 ttctccatct tccttttcac taacgtgtgg gtcagctact agatagtccg ttgtcgcaca
     2161 aggacttcac tcccatctta aagttgactc aactccatca ttcttgggct ttggcaacat
     2221 gagagctgca taactcacaa ttgcaaaaca catgaattat tattgggggg attgtaaatc
     2281 cttctgggaa acctgccttt agctgaattt tgctggttga cacttgcaca atttaacctc
     2341 aggtgtcttg gttgatacct gataatcttc cctcccacct gtccctcaca gaagatttct
     2401 aagtagggtg attttaaaat atttattgaa tccacgacaa aacaataatc ataaataata
     2461 aacataaaat taccaagatt cccactccca tatcataccc actaagtaca tcgttataca
     2521 tgagcttatc atccagtgtg accaacaatt tatactttac tgtgccaaaa taatcttcat
     2581 ctttgcttat tgaacaattt tgctgacttt ccctagtaat atcttaagta tattaactgg
     2641 aatcaaattt gtattatagt tagaagccaa ctatattgcc agtttgtatt gtttgaaata
     2701 actggaaagg cctgacctac atcgtggggt aatttaacag aagctctttc cattttttgt
     2761 tgttgttgtt aaagagtttt gtttatgaat gtgttataaa aagaaaataa aaagttataa
     2821 ttttga
//
