LOCUS       XM_039104974            1244 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus nitric oxide synthase interacting
            protein (Nosip), transcript variant X1, mRNA.
ACCESSION   XM_039104974
VERSION     XM_039104974.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039104974.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1244
                     /gene="Nosip"
                     /note="nitric oxide synthase interacting protein; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 24 ESTs, 1 Protein, and 94% coverage of the annotated
                     genomic feature by RNAseq alignments, including 228
                     samples with support for all annotated introns"
                     /db_xref="GeneID:292894"
                     /db_xref="RGD:1309992"
     CDS             225..1211
                     /gene="Nosip"
                     /codon_start=1
                     /product="nitric oxide synthase-interacting protein
                     isoform X1"
                     /protein_id="XP_038960902.1"
                     /db_xref="GeneID:292894"
                     /db_xref="RGD:1309992"
                     /translation="MTRHGKNCTAGAVYTYHEKKKDTAASGYGTQNIRLSRDAVKDFD
                     CCCLSLQPCHDPVVTPDGYLYEREAILEYILHQKREIARQMKAYEKQRGARREEQKEL
                     QRAAAQDQVRGFLEKESAIVSRPLNPFMPKAATLPNTGDKEYPPLVRSLGGGFLRCVP
                     QLLPPTDGEQPGPSVGPLGKDKDKALPSFWIPSLTPEAKATKLEKPSRTVTCPMSGKP
                     LRMSDLTSVRFTQLDDSVDRVGLITRSERYVCAVTRDSLSNATPCAVLRPSGAVVTLE
                     CVEKLIRKDMVDPVNGDTLTERDIIVLQRGGTGFAGSGVKLQAEMSRPVMQA"
ORIGIN      
        1 cagagttatt tccggtttcc tactgccagg cggaagtggg aggagtggag attaaaaaca
       61 gtactctttt tccggttcgg gacacagttg aagcaacgac aggacggata gtcgtttttg
      121 aggcgagttc aaaaggcttc tggagcaggc tactgaccac aagcccagga ggtgttcgtg
      181 tcctgtgtga gtgaggtcac cctgccactt cccccttgga caagatgaca aggcatggca
      241 agaactgcac tgcaggggct gtctacacct accacgaaaa gaagaaggac acagcggcct
      301 caggctatgg gacccagaac attcgactga gccgggatgc tgtgaaggac tttgactgct
      361 gctgtctctc tctgcagccc tgccatgacc ctgtggtcac cccagacggc tacctgtatg
      421 aaagggaggc aatcctggag tacatcctac accagaagag agagattgcc cggcagatga
      481 aggcctatga gaagcagcga ggagcccgga gagaagagca gaaagagctg cagcgagctg
      541 cagcacagga ccaagttcga ggcttcctgg agaaggagtc agccattgtg agccggcccc
      601 tcaacccctt catgcccaag gctgccacct tgcccaacac aggtgacaag gagtacccgc
      661 ccttggtcag gtctttaggg ggtggcttcc tgaggtgtgt accccagctt ctccctccca
      721 cagatggtga acagccaggg cccagtgtgg gtcccctagg caaggacaag gacaaagcac
      781 tacccagctt ctggattccc tcactaacgc ccgaggcaaa ggccaccaag ctggaaaagc
      841 cgtcccgcac ggtgacctgc ccgatgtctg ggaagccact gcgcatgtcg gacctgacgt
      901 cagtgcgctt cacacagctg gacgactctg tggaccgagt ggggctcatc acgcgcagtg
      961 agcgctacgt gtgcgcagtg acccgagaca gcctgagcaa cgccacgccg tgtgcggtgc
     1021 tgcggccctc cggggctgtg gtcaccctgg agtgtgtgga gaaactgatc cggaaggaca
     1081 tggtggaccc cgtgaacgga gatacgctga cggagcggga catcatcgtg ctgcagcggg
     1141 gtggcacagg ctttgcaggc tccggagtga agctacaggc agaaatgtcc cggccagtga
     1201 tgcaggcctg agccgtgacc taataaactt ggacgtgaac aggc
//
