LOCUS       XM_039103899            1054 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus NOP53 ribosome biogenesis factor
            (Nop53), transcript variant X2, mRNA.
ACCESSION   XM_039103899
VERSION     XM_039103899.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1054
                     /gene="Nop53"
                     /gene_synonym="Gltscr2"
                     /note="NOP53 ribosome biogenesis factor; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 39 ESTs, 9 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     116 samples with support for all annotated introns"
                     /db_xref="GeneID:292624"
                     /db_xref="RGD:1303085"
     CDS             184..1005
                     /gene="Nop53"
                     /gene_synonym="Gltscr2"
                     /codon_start=1
                     /product="ribosome biogenesis protein NOP53 isoform X2"
                     /protein_id="XP_038959827.1"
                     /db_xref="GeneID:292624"
                     /db_xref="RGD:1303085"
                     /translation="MNSSSSWTLDSRKKRPPRLHIKPSQVPAVEVIPAGASYNPTFED
                     HQALLLEAHEVELQREKEAEKLERQLALPTAEQAATQESVFREMCEGLLEESEDEDGP
                     GCAEQPEADDGATETSPTGAAGPEKRMEKKTEQQRRREKAARKLRVQQAALRAARLQH
                     QELFRLRGIKAQVARRLAELARRKEQRRIRRLAEADKPRRLGRLKYQAPDIDVQLSSE
                     LSDSLRKLKPEGNILRDRFKSFQKRNMIEPRERAKFKRKYKVKLVEKRAFREIQL"
ORIGIN      
        1 atgatggacc gggagttcag gctcggtgtg gaagacttac tattaccgtc tttaacaaat
       61 aagcatccag aaatcccgac aaagtttaaa atttcttcta gttttttttt taaatttgaa
      121 acagggcctc actaggtagc tctggacggc ctggcactcg tggcttgttg gcagaggccc
      181 caaatgaaca gctcttcttc gtggacactg gactcaagaa aaaagcggcc accacgactc
      241 cacatcaagc cttcccaggt gcctgcggtg gaagtgattc ctgcgggagc ctcctacaac
      301 ccaacctttg aagatcacca ggccttgctt ctagaggccc atgaggtgga gctgcagcgt
      361 gagaaagagg cagaaaagct ggagcgacag ctggccctgc ccactgcaga gcaagctgct
      421 acccaggagt ccgtgtttcg ggagatgtgt gagggcctgc tcgaagagtc tgaggatgag
      481 gatgggccag gctgtgctga gcagccagag gctgacgatg gggccactga gacctcaccc
      541 actggtgctg ctggtcctga gaagaggatg gagaagaaga cagagcagca gcggcggcgg
      601 gagaaggctg ctcgcaagct gcgggtgcag caggctgcac tgagggcagc ccggcttcag
      661 caccaagaac tcttcaggct acgtgggatc aaggcccagg tggcccggag gctggcagag
      721 ctggcacgcc ggaaggagca gcggcgcata cggcgactgg cagaggctga caaaccccga
      781 aggctgggac ggctcaagta ccaggcccct gacattgatg tgcagctcag ctctgagcta
      841 tctgactcac tcaggaaact gaagccagaa ggtaacattc tccgagacag gttcaaaagc
      901 ttccagaaga gaaatatgat tgagccccgg gaacgagcca agttcaagcg caaatacaaa
      961 gtgaagctgg tggagaagcg ggctttccgc gagattcagt tgtagctgtg cagatgttgg
     1021 agcctctgcc cctcaataaa gtgctgtgac caac
//
