LOCUS       NM_001047095            1082 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus NOP16 nucleolar protein (Nop16), mRNA.
ACCESSION   NM_001047095 XM_001067951 XM_225176
VERSION     NM_001047095.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1082)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 1082)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AM258958.1.
            
            On or before Sep 7, 2006 this sequence version replaced
            XM_225176.4, XM_001067951.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB256043.1, AM258958.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="W"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p14"
     gene            1..1082
                     /gene="Nop16"
                     /gene_synonym="RGD1305727"
                     /note="NOP16 nucleolar protein"
                     /db_xref="GeneID:306768"
                     /db_xref="RGD:1305727"
     exon            1..175
                     /gene="Nop16"
                     /gene_synonym="RGD1305727"
                     /inference="alignment:Splign:2.1.0"
     CDS             69..605
                     /gene="Nop16"
                     /gene_synonym="RGD1305727"
                     /note="NOP16 nucleolar protein homolog"
                     /codon_start=1
                     /product="nucleolar protein 16"
                     /protein_id="NP_001040560.1"
                     /db_xref="GeneID:306768"
                     /db_xref="RGD:1305727"
                     /translation="MPKAKGKTRRQKFGYNVNRKRLNRNARRKAAPRIECSHIRHAWD
                     HTKSVRQNLAEMGLAMDPNKAVPLRKRKVKAMEVDTEERPKDLVRKPYVVNDLEAEAS
                     LPEKKGNTLSRDLIDYVHYMVENHGEDYKAMARDEKNYYQDTPKQIRNKINVYKRFYP
                     TEWQVFVASLQNKKMEVD"
     exon            176..284
                     /gene="Nop16"
                     /gene_synonym="RGD1305727"
                     /inference="alignment:Splign:2.1.0"
     exon            285..354
                     /gene="Nop16"
                     /gene_synonym="RGD1305727"
                     /inference="alignment:Splign:2.1.0"
     exon            355..461
                     /gene="Nop16"
                     /gene_synonym="RGD1305727"
                     /inference="alignment:Splign:2.1.0"
     exon            462..1066
                     /gene="Nop16"
                     /gene_synonym="RGD1305727"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagactatta acacgcggct ctgagagcgt gtttcggagt ttgagctgct ggtgcggcag
       61 tttgcgcgat gcccaaggct aagggaaaga ctcggaggca gaagttcggt tacaacgtca
      121 accgaaagcg tctgaaccgg aatgctcgtc ggaaggcagc gccacggatc gagtgctccc
      181 acatccgaca tgcctgggac cacaccaaat ccgtgcggca gaacctggcg gagatggggt
      241 tggccatgga ccccaacaag gcggttcccc tccgtaagag gaaggtaaag gccatggagg
      301 tagacacgga ggagagaccc aaggatcttg ttcggaagcc ctatgtggtt aatgacctgg
      361 aggcagaagc tagcctccca gagaagaaag gaaatacctt gtctcgggac ctcatcgatt
      421 atgttcatta catggtggag aatcatggag aggactataa ggccatggcc cgggatgaga
      481 agaattacta tcaagacacc ccaaaacaga tccggaataa gatcaatgtc tataagcgct
      541 tttacccaac ggagtggcaa gtctttgtgg cttctttgca gaataagaag atggaggtag
      601 actgagtggt gcacacccca gtcctaggtc tactggacca aagaaaccac cccccggctg
      661 taaggcaagg gatgtatagt ttcagatgat gctgggaaag tcctgtggaa tcaggtttta
      721 catgtacact gtctctgcct cctcccctgc actcctcctt tcttctggag aaggaactcc
      781 gttttgtttt ttgagatcat ctctctaata gccttatctg tcctagaagg ctctctgtag
      841 accaggttgg ccttgaactc acagataccc accagcctct gcctcccagg tgctgggatt
      901 aaaggcatgc accaccacct tgagaaggaa ctctttcgag gccatgattc atgttctttt
      961 gggagcttac agaaagccag ggccttctgt cttgtgttca gaggagatgc tctatttcaa
     1021 tgtgttctgt atataataaa aagagggttt tacctgtgta acatgaaaaa aaaaaaaaaa
     1081 aa
//
