LOCUS       NM_001108484            4201 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus Nodal modulator 1 (Nomo1), mRNA.
ACCESSION   NM_001108484 XM_001080045 XM_341861
VERSION     NM_001108484.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4201)
  AUTHORS   Dettmer U, Kuhn PH, Abou-Ajram C, Lichtenthaler SF, Kruger M,
            Kremmer E, Haass C and Haffner C.
  TITLE     Transmembrane protein 147 (TMEM147) is a novel component of the
            Nicalin-NOMO protein complex
  JOURNAL   J Biol Chem 285 (34), 26174-26181 (2010)
   PUBMED   20538592
REFERENCE   2  (bases 1 to 4201)
  AUTHORS   Haffner C, Dettmer U, Weiler T and Haass C.
  TITLE     The Nicastrin-like protein Nicalin regulates assembly and stability
            of the Nicalin-nodal modulator (NOMO) membrane protein complex
  JOURNAL   J Biol Chem 282 (14), 10632-10638 (2007)
   PUBMED   17261586
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473979.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_341861.3, XM_001080045.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132262 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4201
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     gene            1..4201
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /note="Nodal modulator 1"
                     /db_xref="GeneID:361578"
                     /db_xref="RGD:1305240"
     exon            1..213
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     CDS             73..3717
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /codon_start=1
                     /product="Nodal modulator 1 precursor"
                     /protein_id="NP_001101954.1"
                     /db_xref="GeneID:361578"
                     /db_xref="RGD:1305240"
                     /translation="MRAGRCAAVLLLLLLSGPGRAIGSEDIVVGCGGFVKSDVEINYS
                     LIEIKLYTKHGTLKYQTDCAPNNGYFMIPLYDKGDFILKIEPPLGWSFEPTNVELHVD
                     GVSDVCTRGGDINFVFTGFSVNGKVLSKGQPLGPAGVQVSLRSTGADSKIQSTVTQPG
                     GKFAFFKVLPGDYEILATHPTWALKEASTTVRVTNSNANAAGPLIVAGYNVSGSVRSD
                     GEPMKGVKFLLFSSLVNKEDVLGCNVSPVSGFQPPDESLVYLCYAVSKEDGSFSFYSL
                     PSGGYTVVPFYRGERITFDVAPSRLDFTVEHDSLRIEPVFHVMGFSVTGRVLNGPDGE
                     GVPEAVVTLNNQIKVRTKADGSFRLENITTGTYTIHAQKEHLYFDMVTIKIAPNTPQL
                     ADLIATGFSICGQISIIRSPDTIKQMNKYKVVLSSQDKDKALVTVETDAHGSFCFKAK
                     PGIYKVQVVVPEAETRAGLMLKPQTFPITVTNKPVMDVAFVQFLASVSGKVSCLDTCG
                     DLLVTLQSLSRQGEKRSLQLSGKVNSMTFTFDKVLPGKYKISIMHEDWCWRNKSLEVE
                     VLEDDVSAVEFRQTGYMLRCALSHAITLEFHQDGNGPENVGIYNLSRGVNRFCLSKPG
                     VYKVTPRSCHRFEQAFYTYDTSSPSILTLTAIRHHVLGTIITDKMMDVTVTIKSSIDS
                     EPALVLGPLKSAQELRREQQLAEIETRRQEREKNGKEEGEEGRARPPGQEMVDELQGP
                     FSYDFSYWARCGEKITVTPSSKELLFYPPSMEATVSGESCPGKLIEIHGKAGLFLEGQ
                     IHPELEGVEIVISEKGASSPLITVFTDDKGAYSVGPLHSDLEYTVTSQKEGFVLTAVE
                     GTVGDFKAYALAGVSFEIKAEDDQPLPGVLLSLSGGVFRSNLLTQDNGILTFSNLSPG
                     QYYFKPMMKEFRFEPSSQMIEVQEGQNLRITITGFRTAYSCYGTVSSLNGEPEQGVAV
                     EAVGQKDCSIYGEDTVTDEEGKFRLRGLLPGCMYHVQLKAEGNDHIERALPHHRVIEV
                     GNNDVDDVNIIVFRQINQFDLSGNVITSSEYLSTLWVKLYKSESLDNPIQTVSLGQSL
                     FFHFPPLLRDGENYVVLLDSTLPRSQYDYVLPQVSFAAVGYHKHITLVFSPTRKLPEQ
                     DIAQGSYIALPLTLLLLLAGYNHDKLIPLLLQLTSRLQGVRALGQAASDSSGPEDMKR
                     QTKKQKTRRT"
     exon            214..303
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            304..349
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            350..450
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            451..557
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            558..630
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            631..783
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            784..921
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            922..1011
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            1012..1117
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            1118..1268
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            1269..1443
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            1444..1585
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            1586..1717
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            1718..1854
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            1855..1942
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            1943..2006
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            2007..2102
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            2103..2321
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            2322..2404
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            2405..2564
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            2565..2691
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            2692..2805
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            2806..2933
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            2934..3075
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            3076..3159
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            3160..3270
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            3271..3372
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            3373..3492
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            3493..3585
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
     exon            3586..4201
                     /gene="Nomo1"
                     /gene_synonym="RGD1305240"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggagccggct gcgtgcggtg tgaggggcgg gaccgggcgg gttgcggagg gtaggcacgc
       61 ggaggccggg ccatgcgtgc gggccggtgt gccgcggtgc tgctgctgct gctgctgagc
      121 ggccccgggc gggcgatcgg ctccgaggac atcgtggtag gctgcggggg tttcgtgaag
      181 tcggacgtgg agatcaacta ctcgctcatc gagataaagt tgtacaccaa gcatgggact
      241 ttgaaatacc agacggactg tgctcctaac aacggctact ttatgatccc cttgtacgat
      301 aagggggatt tcatcctgaa gattgaacct cccctgggct ggagttttga gccaaccaac
      361 gtggagctgc atgtggacgg cgtgagcgac gtctgcacca ggggcgggga catcaacttc
      421 gtgttcactg gcttctctgt gaatggaaag gtcctcagca aagggcagcc cctgggcccc
      481 gcaggagtcc aggtatccct gagaagcact ggcgctgact cgaagatcca gtccacagtc
      541 acacaacctg gtggaaagtt tgcatttttc aaagttcttc ctggagatta tgaaatcctt
      601 gcaacgcacc cgacctgggc gctgaaggag gcaagtacca cggtgcgtgt gacaaactcc
      661 aatgctaacg cggctggtcc cctcatagtg gctggctata atgtgtccgg ctctgtccgc
      721 agtgacgggg agcccatgaa aggggtgaag tttcttctct tttcttcttt agtgaacaaa
      781 gaggatgtcc tgggctgcaa tgtgtccccg gtgtctgggt tccagccccc agatgagagc
      841 ctggtttatc tgtgctatgc agtctccaaa gaagatggct ctttttcttt ctattccttg
      901 ccgagtgggg gctacactgt ggtgccgttc tacagagggg agaggatcac cttcgatgtg
      961 gcgccttcca ggcttgactt caccgtggag cacgacagcc tgagaatcga gcccgtgttc
     1021 cacgtcatgg gcttctctgt cactgggaga gtcttgaatg gacctgatgg agaaggtgtc
     1081 ccggaggctg tggtcacact gaacaatcag attaaagtca gaacgaaagc cgatggctct
     1141 tttcgcctgg agaacataac gacagggaca tacaccatcc atgcccagaa ggagcacctc
     1201 tactttgaca tggttaccat caaaattgca cccaacaccc cacagctggc tgacctcatc
     1261 gctacagggt tcagcatctg tggtcagata tccatcatcc gctcccccga caccatcaag
     1321 cagatgaata aatacaaggt ggtcctgtcc tctcaagaca aggacaaggc tttggtcact
     1381 gtggagacgg atgctcatgg atcattttgc tttaaagcaa aaccagggat ctacaaagtc
     1441 caggtggtgg tgcccgaggc tgagaccaga gccgggctga tgctgaagcc acagacgttc
     1501 cccatcactg tgaccaacaa gcccgtgatg gatgtggcct tcgtgcagtt tttggcgtct
     1561 gtttccggaa aagtctcctg tctggacacc tgcggtgacc tgttggtgac cctgcagtcc
     1621 ctgagccgcc agggcgagaa gcgcagcctc cagctctctg gcaaggtcaa ctccatgact
     1681 ttcacctttg acaaagttct acctgggaaa tacaaaataa gcatcatgca cgaggactgg
     1741 tgctggagga acaagagcct ggaagtggaa gtgctggagg atgacgtgtc tgccgtggag
     1801 ttcaggcaaa ccggctacat gctgcgctgt gcactgtcac acgccatcac tctggagttt
     1861 catcaggatg gaaatggccc tgaaaacgtg gggatttaca atctctccag gggagtcaac
     1921 cgcttctgcc tgtccaagcc cggcgtgtac aaagttactc ctcgctcctg ccaccggttt
     1981 gagcaagcct tttacaccta tgacacgtct tcacccagta tcctgacgct gacagccatt
     2041 cgtcaccatg ttctcggaac tatcatcact gacaaaatga tggatgtcac agtgactatc
     2101 aagtcttcca tcgacagtga gccagccttg gtcttgggac ctctgaagtc tgcacaggag
     2161 ctgcggaggg aacagcagct ggcagagatc gagacccgca ggcaggagag ggagaagaat
     2221 ggcaaagaag agggagaaga aggcagggcc cgacctcctg ggcaagagat ggtggacgag
     2281 ttacagggcc ccttctccta cgacttctcc tactgggccc ggtgtggaga gaaaatcact
     2341 gttacaccct cgtccaaaga gctcctcttt taccccccat ccatggaagc cactgtcagt
     2401 ggagaaagct gcccagggaa gttgattgag atccatggga aggcgggctt gttcctggaa
     2461 ggtcagatcc acccggagct ggagggagtg gagattgtca tcagcgagaa gggagcaagt
     2521 tcacccttga tcactgtctt cactgatgac aaaggtgcct acagtgtcgg ccccctacac
     2581 agtgacctgg agtacactgt gacctcgcag aaggaaggct ttgtgctgac tgccgtggaa
     2641 ggaactgtgg gagacttcaa ggcttatgcc ttggccggtg tgagcttcga gattaaagct
     2701 gaagatgacc agccactccc tggtgtcctc ttatccctca gtggcggtgt gtttcggtcc
     2761 aacctcctga ctcaagacaa cggcattctg acattctcaa acctgagtcc tggtcagtac
     2821 tactttaaac ctatgatgaa ggagttccgc tttgagccat cctcacagat gatagaagtg
     2881 caggaggggc agaacctgag gatcaccatc actggcttcc gaactgccta cagctgctac
     2941 ggcacagtgt cctctttaaa cggagagcca gagcagggcg ttgcagtgga agctgtgggg
     3001 cagaaggatt gtagcatcta tggagaagac accgtgacag acgaggaggg gaagttccgg
     3061 ttacgtggac tgctgccagg gtgcatgtac cacgtgcagc tgaaggcaga aggcaatgac
     3121 cacatcgagc gggcgctgcc ccaccatcgg gtgattgagg ttgggaacaa tgacgtggat
     3181 gacgtaaaca tcatagtttt ccggcagatc aaccagtttg acctgagtgg aaatgtaatc
     3241 acttcctccg agtatctgtc tactttgtgg gtgaagctgt acaagagcga gagtctcgac
     3301 aaccccatcc agacagtgtc tctgggtcag tcgctcttct tccatttccc accgctgctc
     3361 cgagatggtg agaactacgt ggtgcttctg gactccacgc tccccaggtc tcagtacgac
     3421 tacgtcctgc cgcaagtgtc tttcgctgca gtgggctacc acaaacacat cactctggtg
     3481 ttcagtccca cgaggaagct acctgagcaa gacatcgcgc aagggtccta tattgccctg
     3541 cctctgacgc tgctgctcct gttggcaggc tacaaccatg acaagctcat ccctttgctg
     3601 ctgcaactga cgagtcgtct tcagggagtc agagcccttg gccaggcggc ctctgacagc
     3661 agtggcccag aagacatgaa gagacaaacc aagaaacaga agaccaggcg cacgtgagga
     3721 ggaaggaggc cccgtctcct gtggatgaca cagccagggc tgccacctgc ctggagacaa
     3781 aggcacatgt ttacccactt caggcgggcc ctgtgccctg tgacccctgt gttggtatcc
     3841 tgcctgtctg tcctctcctg gtagccctgt ggtgcaatgc gacgaatgga ccctcctgtc
     3901 accctgctga acacaattta ttttctgagt tgaagataat ttattattat tatttttgtc
     3961 agagaagtat ttaagccaag ctggtggtgt gagaacataa ttctaatctt ccacattcgt
     4021 ttgcaagaag agcccagtaa gcatggcgtt tgtctgccgt gccctctgga ctttccccaa
     4081 actaccccct gcactcgagg cccatgccgg aagctgcagc aacatctgtc cataccaaaa
     4141 ggatctgcca agagctggat gaataaagtc agccactcat ttgtggtgtt gtttctctca
     4201 g
//
