LOCUS       XM_006238112            5552 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus nucleolar protein 6 (Nol6), mRNA.
ACCESSION   XM_006238112
VERSION     XM_006238112.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 12, 2024 this sequence was replaced by
            NM_001427201.1.
            
            On Jan 21, 2021 this sequence version replaced XM_006238112.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5552
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5552
                     /gene="Nol6"
                     /note="nucleolar protein 6; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 38
                     ESTs, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 227
                     samples with support for all annotated introns"
                     /db_xref="GeneID:313167"
                     /db_xref="RGD:1308033"
     CDS             250..3690
                     /gene="Nol6"
                     /codon_start=1
                     /product="nucleolar protein 6"
                     /protein_id="XP_006238174.1"
                     /db_xref="GeneID:313167"
                     /db_xref="RGD:1308033"
                     /translation="MGPAPAGQQQRGSTSTGEPEVMELALEGLGKEKASSRKRAQAEA
                     PAEGLPQPVKLSREELYKEPTNEELNRLRETEILFHSSLLRLQVEELLKEVRLSEKKK
                     ERIDAFLKEVIKRIQKVPPVPEAELTDQSWLPAGVRVPLHQVPYAVKGSFRFLPPSQI
                     TIVGSYPLGTCMRPDINVDVVLTMPREILQDKDGLNQRYFRKRALYLTHLAYHLARDP
                     LFGSVRFSYPSGCHLKPSLLLRPHGKDERLVTVRLYPCPPLDFFRPCRLLPTKNNVRS
                     AWYRGQSCPDYASLEPPTPHYNTWILQDTALEAHMHLLSSVLASAQGLKDGVALLKVW
                     LRQRELDKGLGGFNGFLISMLVAFLVSKRKIHTTMSGYQVLRSVLQFLATTDLTINGI
                     SFSLSSDPSLPSVADFHQLFAVVFVDPSGRLNLCADVTASTYNQVQYEAELSMALLDS
                     KADDGFQLLLMTPKPMIQAFDHVVHLRPLSRLQAACHQLKLWPELQDNGGDYVSAALG
                     PLTNILVQGLGCRLHLLAHSRPPVPEWAINQDPPKHKDAGTLTLGLLFRPEGLTSVID
                     LGPEADRPEAAEFRQFWGSRSELRRFQDGAIREAVVWEAESLSEKRLIPHQVVTHLLA
                     LHADIPDTCIHYVGGFLDALIQGPRETSSTGEEALALAVRCYDDLSRLLWGLEDLPLT
                     VSAVQGAHPVLRYTEVFPPAPVRPAYSFYNRHQELASLLPRLDKPCPAYVEPMTVVCH
                     LEGSGQWPQDAEAVQRVRAAFQLRLAEVLTQQHRLQCRATATHTDVLKGGFVFRIRVA
                     YQREPQILKVVRSPEGMISMRDTPASLRLERDTRLLPLLTSALHGLQQQYPAFSGVAR
                     LAKRWVRAQLLGEGFTDESLDLVAASLFLHPEPFTPPSVPQVGFLRFLYLISTFDWKN
                     NPLIVNLNSELTAEEQVEIRSSFLAARTQLPVMVIVTPQDRRSSVWTQDGPSAQILQQ
                     LVSLAAEALPILEKQLMDPRGPGDIRTVFRPPFDIYDVLIHLTPRHIPRHRQAVDPPA
                     ASFCRGLVTEPGPSSLMPVLGYDPPQLYLAQLREAFGDLALFFYDQHGGEVIGVLWKP
                     SSFQPQPFKASSLKGRMVVSRGGELVTVPNIEAILEDFAVLGEGLVQAVEARSERWTV
                     "
ORIGIN      
        1 gcttccggtt taatgctgcg tagaggctgt aaatcggcgg accttgtttg gttccaccca
       61 caatgggcgg atcccttcga acaactgacc aatagtgagc gagatggcga acactggccc
      121 aatggtcctg cagtgggtgg ggcctgtggc aggggcttgt gccctggagt tggcgtttag
      181 gcccacgtgg ggagctacgg ggtagatccg tcttaaatcc ctagtgttgg agagagacct
      241 gctgtgaaga tgggaccagc ccccgccgga cagcaacagc gcgggtccac ttcaactggg
      301 gagccagagg tgatggaact tgccttagaa ggcttgggca aagagaaggc atcctcaaga
      361 aagcgtgccc aagcagaagc acctgcggaa ggcctccctc agccagtgaa gctcagtcgg
      421 gaagagctgt acaaggagcc tacaaatgaa gaactgaatc gcctccgcga gacggagatc
      481 ttgttccact ccagcttgct tcgtttacaa gtggaggagt tactaaagga agtcagactg
      541 tcagagaaga agaaagagag gattgatgct ttcctgaagg aggtcatcaa gcggatccag
      601 aaagttcccc cagtccctga ggctgagctc actgaccagt catggctccc agctggggtc
      661 cgagtgcccc tccaccaagt accctacgct gtgaagggct ccttccgctt cctgcctcca
      721 tcccagatca ctattgtggg cagctaccct ctgggtactt gtatgcgacc agatatcaat
      781 gtggatgtgg tcctgaccat gcccagggaa atcttacagg acaaagatgg gctgaaccag
      841 cgctacttcc gcaagcgggc cctttatctg actcacttag cctaccacct ggcccgggat
      901 cccctctttg gcagtgttcg cttctcttac cccagcggat gccacctgaa gccctcactg
      961 ctactgcggc cacatgggaa ggatgagcgc ctggttactg tacgcctgta tccgtgccct
     1021 cctttggact tcttccgccc ttgccgcttg ctgccaacca agaacaatgt gcgctctgcc
     1081 tggtaccgag ggcagagctg tccagattat gctagcttag agcctcctac cccccactat
     1141 aacacctgga tcctgcagga tacagctctt gaggctcaca tgcacttgct gtccagtgtg
     1201 ctggcctccg cccaggggct gaaggacggt gtggcgcttc tgaaggtttg gctgaggcag
     1261 cgggagctgg acaagggcct gggtggattt aatggattcc taatctccat gctggttgcc
     1321 ttcctcgtgt ctaaacgaaa gatccatacc accatgagcg gctaccaggt cctgagaagt
     1381 gtcctgcagt tcctggccac tacagatctg acgatcaacg gaatcagctt ctccctcagc
     1441 tcagatccct ccttgccgtc cgtggctgac ttccaccagc ttttcgccgt tgtgtttgtg
     1501 gacccatcag gccgtctcaa cctctgtgcg gatgttacag cttccactta caaccaggtg
     1561 cagtatgagg cagagctctc tatggcattg ctggacagca aagctgacga cgggtttcag
     1621 ctgctcttga tgacgcccaa acccatgatc caggcttttg accacgtggt ccatctccgt
     1681 ccactgagtc gtctgcaggc agcatgtcac cagctgaagc tttggccaga gttgcaggac
     1741 aacggcgggg actatgtttc ggcggctttg ggcccactga ccaacatctt ggtgcagggt
     1801 ctggggtgcc ggctgcatct gctggctcac tcccggcccc cagtcccaga gtgggctatc
     1861 aaccaggatc ccccgaagca caaggacgcc gggaccttga ctctgggatt gctcttccgg
     1921 cctgagggac tgaccagcgt tattgatctt ggcccagagg ctgacaggcc tgaggctgct
     1981 gaattccgtc agttctgggg atcccgctcg gagctcagac gtttccagga tggagccatc
     2041 cgggaagctg tggtctggga ggcagaatct ctgtctgaga agcgccttat tcctcaccag
     2101 gtggtcaccc acctcttggc actccatgct gacatcccgg acacctgtat ccactatgtg
     2161 ggtggcttcc tcgatgcatt gatccaaggc cccagagaga cttccagcac aggtgaggag
     2221 gccctggcat tggctgtgcg ctgctatgat gacctcagcc gcctgctctg ggggctggag
     2281 gatctcccac tcactgtgtc tgctgttcag ggcgctcacc cagtgctgcg ctatacagag
     2341 gtgttccccc cagctccagt tcgacctgcc tattccttct ataaccgcca ccaagagcta
     2401 gcctcactgt tgccccggct ggataagccc tgcccagcct atgtggagcc tatgactgtg
     2461 gtttgtcacc tggagggcag cgggcagtgg cctcaggacg cagaggctgt gcagcgggtc
     2521 cgcgctgcct tccagctgcg cctggcagag gtgttgaccc agcagcatag actacagtgc
     2581 cgtgccactg ccacacacac tgacgtcctc aagggtgggt ttgtgtttag gatccgagtg
     2641 gcctatcaac gggagccaca gatcctgaag gtggtgcgga gccctgaggg gatgatctct
     2701 atgagagaca cacctgcctc cctccgcctt gagagagaca ccaggctgct gcccttgctc
     2761 accagtgccc tgcatggact ccagcagcag tacccagcct tctcaggtgt ggctcgcctg
     2821 gccaagcggt gggtgcgtgc ccagcttcta ggcgagggct tcactgatga gagcctggat
     2881 ctggtggccg cttcgctctt cctccaccct gagcccttca cccctcccag tgtcccccag
     2941 gttggctttc ttcggttcct ttacctgata tctacctttg attggaagaa caaccctctt
     3001 attgtcaatc tcaacagtga gttgactgct gaggaacagg tggagattcg aagtagtttc
     3061 ctggcagctc gaacacagct cccagtcatg gtcatcgtta ccccccaaga ccgcagaagc
     3121 tctgtgtgga cacaggatgg accctctgcc cagatccttc agcagcttgt gagcctggcg
     3181 gctgaagccc tgcccatcct ggaaaagcag ctgatggatc cccgagggcc tggggacatt
     3241 aggacagtgt tccggccacc cttcgacata tatgatgtgc tgatccacct gactccccgc
     3301 cacatccccc ggcaccgcca agctgtggac cctccagccg cttccttctg ccgtggtctg
     3361 gtcactgagc ccgggccttc gtctctgatg cctgtcctgg gctatgatcc ccctcagctc
     3421 tatctggcac agctcaggga ggcctttgga gatctggctc ttttcttcta tgaccagcat
     3481 ggtggagagg tgattggtgt tctctggaag cccagcagct tccagcccca gccctttaag
     3541 gcctccagcc taaagggacg catggtggtg tctcgaggtg gggagctcgt gacggtgccc
     3601 aacatagaag cgatcttgga ggactttgct gtgttgggtg aaggcctggt acaggctgta
     3661 gaggcccgaa gtgagaggtg gactgtgtga ttctgacctt gggacaagca gtaggtgggc
     3721 catgggatgt tggacctgtg gagcagcatg tcagtggggc agccaccctc ggtgcagtat
     3781 ggacgcctga tgaacacatt gaatccccca tccccagagg acgccctgcg agattttcag
     3841 tctgatgcat cagctctggg acaggggcca tggtgtcctg tgtcccctac acctgactat
     3901 ccaaattccc agaggaggag accgagtcag ctcccaggga actgaatcca tgagatccat
     3961 ctgcccatcc atcctgagtc agcctgaact gtttttcgtt ttttgttttc tcaccacctg
     4021 catcttccca ctgacaggac tgatgtgtca gatggcaccg tgcctttccc tgttgctact
     4081 tccagcctgt agattggacc tcaaagaagc tgtggcccct cctgggggtc gacaccagca
     4141 ctgagcagtg ggagggggct gagtgtgtat gagtggaacc cactgaacag gcacagtgcc
     4201 ctaagggtag caacagtgga aaagacatag accaggcagg actgggtgga cggagtttag
     4261 gggtctctgg tccagaagag agacagaaag ctgggcactg cagacgagcc tttttttgag
     4321 ttctacccac ccctgctgcc gtctgtggtt ccccattact gtgccaagct ctgagggaag
     4381 caggatgcta cctctcagct tggtccacgt ccccttctgg cagccactcc ctccttttct
     4441 cccctaatcc tgactggttt tttttttaga ctcagctcaa atagcacccc tcctagtccc
     4501 tgccctcacc tccacccctc tctcccttct gtgaactgtg agctgtgaat gcgattaccc
     4561 cttgttgagt tcacttggca ggcatgcgta ccagcatgca ccttctgttg tcctgaactc
     4621 tgatttaaag taaattgctt aattccttct gggtacccga cttgtcttct ctcgagattt
     4681 cagccaggtc tgtgaggaag ctctgtgagg acaggcagac actgagcacg ggcagatgac
     4741 ttgctgtttc tcacagcacc tagagtgaga ctcatagctg tgtagaaggg tagccccagc
     4801 ccaagcagat ggaggccagg ggcaccacca caaggccaca aagatacagg agtcaaacct
     4861 tggactatgc tgtgagcagg caaggtggcg aaagaaagcc taagactaat tgggtgtagt
     4921 gtgtcatgct tttaatccca gcactctgga ggcaagggca ggaggagctt ttgagttgga
     4981 ggcgagcctt gtctacagag tgagttacaa attggaggtc agtccgagct actgagacca
     5041 aaagcaatgg tgacccagtt tgtatgaaaa tggactttaa aaaacctgaa ggtctggcag
     5101 taaggctcag caggtaaagg tgtctgacac ctgcgtccca tccttggatt catggtggaa
     5161 ggaattgttt cagtgtttgg gaggcaaaag caggcagatt tgtgagttcg agggtttaca
     5221 gggtgagttc cagaacagtt agggccatac agagaaaaat gttgtctcaa aaatcaaaac
     5281 aaggggctgg ggatttagct cagtggtaga gcgcttacct aggaagcaca aggccctggg
     5341 ttcggtcccc agctctgggg aaaaaaaaaa aatcaaaaca aaaagatggg gttggtttga
     5401 tctcagcagt tagaaggtgg atctctgaat tccaggccag actggtcttt aaaaaaaagg
     5461 gagaaagaga atccactcct gtaagttaag ttgtcttctg acctttacct atcatacact
     5521 ttcgtaaact caaataaatg taatagcaac aa
//
