LOCUS       NM_001415694            5302 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus nucleolar protein 4 (Nol4), transcript variant 2,
            mRNA.
ACCESSION   NM_001415694 XM_006254453
VERSION     NM_001415694.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000018.1.
            
            On Dec 23, 2022 this sequence version replaced XM_006254453.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.76353.1,
                                           SRR26360172.648329.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1878              JAXUCZ010000018.1  14567800-14569677   c
            1879-2028           JAXUCZ010000018.1  14473628-14473777   c
            2029-2140           JAXUCZ010000018.1  14441607-14441718   c
            2141-2253           JAXUCZ010000018.1  14440582-14440694   c
            2254-2386           JAXUCZ010000018.1  14430741-14430873   c
            2387-2670           JAXUCZ010000018.1  14335948-14336231   c
            2671-2850           JAXUCZ010000018.1  14290336-14290515   c
            2851-3042           JAXUCZ010000018.1  14289337-14289528   c
            3043-3156           JAXUCZ010000018.1  14270835-14270948   c
            3157-3337           JAXUCZ010000018.1  14235408-14235588   c
            3338-5302           JAXUCZ010000018.1  14207303-14209267   c
FEATURES             Location/Qualifiers
     source          1..5302
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18p12"
     gene            1..5302
                     /gene="Nol4"
                     /note="nucleolar protein 4"
                     /db_xref="GeneID:307553"
                     /db_xref="RGD:1310663"
     exon            1..1878
                     /gene="Nol4"
                     /inference="alignment:Splign:2.1.0"
     CDS             1615..3531
                     /gene="Nol4"
                     /note="isoform 2 is encoded by transcript variant 2"
                     /codon_start=1
                     /product="nucleolar protein 4 isoform 2"
                     /protein_id="NP_001402623.1"
                     /db_xref="GeneID:307553"
                     /db_xref="RGD:1310663"
                     /translation="MESERDMYRQFQDWCLRTYGDSGKTKTVTRKKYERIVQLLNGSE
                     SSSTDNAKFKFWVKSKGFQLGQPDEVRGGGGGAKQVLFVRVKTTDGVGVDEKLSLRRV
                     AVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAISESYAFLPREAVTRFLMSCSE
                     CQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSI
                     ESDEFDMSDSTRMSAVNSDLSSNLEERVQSPQTAQGQQDDDSAAESSNGNETLGHSSV
                     ASGGAHGREPGDSSSDGKTGLEQEEQPLNLSDSPRSAQLTSEYRVEDQGSNGKNKYKN
                     LLISDLKMEREARENGSKSPAHSYSSYDSGKNEGVDRGAEDLSLSRGDEDEDEHDEHE
                     DSEKVNESDGVEAERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQFPE
                     YQERARKRIRTYLKSCRRMKRSGFEMSRPIPSHLTSAVAESILASACESESRNAAKRM
                     RLDKTQDEATPADKQCKPEAAQATYSTSTVPGSQEVLYINGNGTYSYHSYRGLGGGLL
                     NLNDTSSSGPTDLSMKRQLAPGSGSSSSSNPRPQLSPTEINAVRQLVAGYRESAAFLL
                     RSADELENLILQQN"
     exon            1879..2028
                     /gene="Nol4"
                     /inference="alignment:Splign:2.1.0"
     exon            2029..2140
                     /gene="Nol4"
                     /inference="alignment:Splign:2.1.0"
     exon            2141..2253
                     /gene="Nol4"
                     /inference="alignment:Splign:2.1.0"
     exon            2254..2386
                     /gene="Nol4"
                     /inference="alignment:Splign:2.1.0"
     exon            2387..2670
                     /gene="Nol4"
                     /inference="alignment:Splign:2.1.0"
     exon            2671..2850
                     /gene="Nol4"
                     /inference="alignment:Splign:2.1.0"
     exon            2851..3042
                     /gene="Nol4"
                     /inference="alignment:Splign:2.1.0"
     exon            3043..3156
                     /gene="Nol4"
                     /inference="alignment:Splign:2.1.0"
     exon            3157..3337
                     /gene="Nol4"
                     /inference="alignment:Splign:2.1.0"
     exon            3338..5302
                     /gene="Nol4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggagaggcg agaggttcag tgtgtggagc tgctcgcgca gcgcccgggc tgtcagtccg
       61 agctggggcc gccgcgagac cttccaagag acgcgcaccc ccgcgccccg cacaccctcg
      121 ctcgaccaca cacacacgca cacgctcagc ctggccgcgc aggagccact gagcagcccg
      181 agagctccgg gaccggctgc gggcagagga gtgagccggg ttcccactgg ggctttcgcc
      241 gaggagaccg cagcgagctt cccggtgggc tcggacccct caggaacacg gcgagggcca
      301 tccggctggt taagccgatc cctgcgaccc gcgctggcct cggcagggag tgcagtaaag
      361 aggagcggct gcagctagca ggactggaac tcccctggtt ccagcgccgc cgcgacacac
      421 gggtggaaat cctaatggag ggatcgctta cttcctttgc ttgggaaaat cgtcaggagc
      481 aactccgatt tggctcctct gagcatcgga ggggggtcca tgacgtgaca gggggaaaat
      541 agacaactga aacctcccgc gtgaactgca aactataacc cagggagagg gaagaactgc
      601 tttctgcatt ttaatttcac gcaaaaaagg ttcaagtgtc gtgcggtaaa cttatttcca
      661 tgtcttgtac ccacttcagc agaacccaga gggtcctatc ttggggacag catcagtccg
      721 aagagctcta gccagcggcc tgtcttcctg ctcccacatt ccccggactg catccctgtc
      781 tggggtactc catctatcct atagagctat ggccaggtat ctatgaatac tgggcgaatt
      841 tctgaaaccc aactcttaca acctacctgc gtggctggaa tttcacctaa tacatctgaa
      901 gaaatggcat tttgagtcgt ttttaggata ccttctttaa aattcatgta aaacaggatc
      961 tgataggctt accaacatga caggtaagaa ctttctggct ctctagtcct gtcgcagagg
     1021 aggcccaggt tgagcaggag agagagtcca gggacccgtg tgcccactga ggctcatcag
     1081 cagagggctg cttttgctag aggcgcagcc ctggctcctg gaccatccgc tggggaagct
     1141 tctggggcgc gcgccaggag attgccttgc gctccacctg ccctgccctg gacacagccc
     1201 gggaggcgag gcatcgaggg accacctcaa gtcaatattg ggatttttaa taaaccaagg
     1261 aatggggttt taattattca gaaacccagc tcctctgggc cagatgctgt tgggatggtg
     1321 ctggtcacac agtattaaag agaccgaccg ctaaggggac tagaaaagcg tccgagacat
     1381 cctttgcaat taggaacgag ccagacttgg tagcacgggg cattgattgc tggtgcccat
     1441 ccggaccctc ctcctctctc cctgatcctc cccccacccc atcggaggca gctcccgcgg
     1501 ctcggccagg acctcgcgtc ctcgcatcgt ggtctgggct gcgtatttca tgagcccagg
     1561 gtgaacaggt gcgaagtgcg ctgggagcat ccggcccacg gcagcgcggg gaacatggag
     1621 agcgagcgcg acatgtaccg ccagtttcag gactggtgcc ttaggactta cggggactca
     1681 ggcaagacca agacggtgac ccgtaagaaa tacgagcgga ttgtccagct cctcaacggc
     1741 tcagagtcaa gctccaccga caatgccaaa tttaaattct gggtcaaatc gaagggtttc
     1801 cagctgggcc agccggatga ggtccgcggg ggaggcggcg gcgccaagca agtgctcttc
     1861 gtgcgggtca agaccacgga tggcgtagga gttgatgaga agctttcatt acggcgagtg
     1921 gctgtggttg aagatttctt tgacatcatc tattccatgc atgtggagac agggccgaat
     1981 ggagaacaaa tccgaaaaca cgctgggcag aagagaactt acaaagcaat ttcagagagc
     2041 tacgccttcc taccaagaga agcggtgacg cggtttctaa tgagctgttc cgagtgccag
     2101 aaaagaatgc acttgaaccc agatgggacc gatcacaaag ataatgggaa gcctcctacc
     2161 ctggtgacca gcatgatcga ctacaacatg ccaatcacca tggcgtacat gaagcacatg
     2221 aaactgcagc tgctaaactc acagcaagat gaggatgaaa gttcaataga gagtgatgaa
     2281 tttgatatga gtgattcaac tcggatgtcc gccgtgaact ctgaccttag ctccaatctg
     2341 gaagaaagag tgcaaagtcc ccagactgcc cagggccagc aggatgatga ctctgctgca
     2401 gagagctcta atggcaatga gactctgggg cacagttcag ttgcttccgg gggagcacat
     2461 ggcagggagc ctggggactc cagcagtgat ggcaaaacgg ggctggagca ggaagaacag
     2521 ccactgaacc tgagtgacag tccccgctct gcacagctga cttcggaata cagggtagag
     2581 gaccaaggca gtaatgggaa aaacaagtat aagaatcttc taatctccga cctcaagatg
     2641 gaaagagagg caagagaaaa tggaagcaag tctccagccc acagctactc cagctatgac
     2701 tctggcaaaa atgagggtgt cgatcgaggc gcagaggacc tgtccctcag caggggagac
     2761 gaagacgaag atgaacatga cgagcatgag gattctgaga aggtgaacga gagcgatggc
     2821 gtagaagctg agaggctgaa agctttcaac atgtttgtca ggctgtttgt agatgaaaac
     2881 ttggaccgaa tggtcccaat ctctaagcag cccaaagaaa agatccaggc tatcattgac
     2941 tcatgcaggc gacagttccc tgagtatcaa gagcgcgcca gaaagcgtat ccgtacttac
     3001 ctcaagtcct gcaggcggat gaagagaagt ggttttgaga tgtctcgacc tatcccttcc
     3061 caccttactt cagcagttgc agagagtatc ttggcttcag cctgtgaaag cgagagtaga
     3121 aacgctgcca agaggatgcg tctggataaa acccaggacg aagctactcc tgctgacaaa
     3181 cagtgcaagc ctgaggcagc ccaggccacc tactcaacgt ctactgttcc aggctcccag
     3241 gaggtattgt acatcaatgg caatgggacc tacagttacc atagttaccg aggactagga
     3301 ggaggactgc taaacctgaa tgacacttct agtagtggac ccacagatct gagcatgaag
     3361 aggcagctgg cgcctggctc aggatcttcc agcagttcaa accccagacc tcagctcagt
     3421 ccgacagaaa tcaacgccgt gagacagctt gtcgccgggt atcgagaatc ggctgcattt
     3481 ttattgcgtt ctgcagatga actggaaaat ctcattttac aacagaactg aggccaacga
     3541 tgtctgtact cactgggttc taaatttgcg gtttccacta atgacacttg attttccagc
     3601 agagagactc ctaggcttgc tccacagtct tttaagagaa gcgtttccat catgccatgt
     3661 tgtccttgat ccatacactg gtgtgttgag gagcgtcaca ggaactctgg tcttgaagta
     3721 cttgagatgc tcaagtgtgc ccagcctgtt gcttttgttt tagtgtgtca gcataaatat
     3781 cataagcaat tttttaaaag gctgcatatt ctcaattcaa ggattaaaaa tgaagaagct
     3841 catggaataa aaaaaaagct caagatccaa ctgaaatatt agtggaattt tctactgact
     3901 cattggactg aaagctgaag tatctggggg gaaaaagcca aatttcttat tgctacagga
     3961 tatgacaaca atgaaaagga tcttgtattt taaaagaaaa aaatgtaatt tttataaaaa
     4021 gaaaacttgt ttttcattca aaatggtcat ttttactttg gtaacttttt cataggttct
     4081 aaaaagaaaa ctgtttttga gaaactattg taagtaccct ttccgcatcc cttttgcctt
     4141 ctcctctttc caaattcttt ctacaaaaga aaaataacac tcgatgctgg aaaacccttt
     4201 gcctacttcc tggaagtcga cccatcagga actacttcca agagatgcct ccatttctgt
     4261 ccttacgcca gtctcaaaac gcccacgccc cacggcagct taccacagca gttttcatcc
     4321 cagaattttc taaacattat aaaaagacgt gttgaaaaca aaaccccaac acatcgctgc
     4381 gttccccaga gctgcttgcc ccaggctgtg ctacccagca agcctccaga gcagcgactc
     4441 gatgtagatg actgaatgtt actgaggttg caagtgacaa tcttaaactt tgcactcttg
     4501 tatgtacttc tcatttcttt tggaaacagt ttccaggaaa ggctgttgtt gtgtctcctg
     4561 gtatgatttg tagcatttaa gtttttgttc ttttttattt ttatttattt atttttttaa
     4621 attgagagct ctcagcagat agagctagat ctgaacaacg aactctctct cccctccgtc
     4681 tcccaggctc ggccattttc tccacttcta gtgttagaca caaccctgag tggtattttc
     4741 tgtgcactga agcaagccta tttttaagat atttaaggag aagtacttta gttcatactt
     4801 gtactatttt cctttctgtt gtttagcttc ggttgaatta caaattcttt gtgcattctt
     4861 gaatttgcct tattttatgt aaaatctatg tcattcgggt tttgacaatg agttgaaggc
     4921 attagtgata tcccttacct tcttgttaca tctagttttc caagtactga ctgtgattgt
     4981 gaccaggtaa tgtgcacttt ttcttgtaac tgtggacatt gctatgcttt tttcttcttg
     5041 tgtttctaga attattgttc cttacagtta cgtaaacaaa aatacaaaaa caacaaaaaa
     5101 attttgtgat actgttggtg aatataatgt gaaaatctta ttgaaatatg agtattttgg
     5161 aaatacatag atgcacaaac atcttttaaa ggtgtgaatt tagagtttgc ttatttaatg
     5221 aaaatttaaa aatttgaggg ctggtataag ttttctctgt ttttgtttgg tttaataaaa
     5281 gatttctgtg ttaaagaaac aa
//
