LOCUS       NM_001014076            2847 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus nucleolar protein 10 (Nol10), mRNA.
ACCESSION   NM_001014076 XM_233988
VERSION     NM_001014076.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2847)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 2847)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   3  (bases 1 to 2847)
  AUTHORS   Staub,E., Fiziev,P., Rosenthal,A. and Hinzmann,B.
  TITLE     Insights into the evolution of the nucleolus by an analysis of its
            protein domain repertoire
  JOURNAL   Bioessays 26 (5), 567-581 (2004)
   PUBMED   15112237
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC081954.1.
            
            On Apr 20, 2005 this sequence version replaced XM_233988.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC081954.1, SRR8487227.281906.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132263, SAMD00132264
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2847
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q16"
     gene            1..2847
                     /gene="Nol10"
                     /note="nucleolar protein 10"
                     /db_xref="GeneID:313981"
                     /db_xref="RGD:1359447"
     exon            1..139
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
     CDS             74..2140
                     /gene="Nol10"
                     /codon_start=1
                     /product="nucleolar protein 10"
                     /protein_id="NP_001014098.1"
                     /db_xref="GeneID:313981"
                     /db_xref="RGD:1359447"
                     /translation="MQVSSLNEVKIYSLSCGKSLPEWLSDRKKRALQKKDVDVRRRIE
                     LIQDFEMPTVCTTIKVSKDGQYILATGTYKPRVRCYDTYQLSLKFERCLDSEVVTFEI
                     LSDDYSKIVFLHNDRYIEFHSQSGFYYKTRIPKFGRDFSYHYPSCDLYFVGASSEVYR
                     LNLEQGRYLNPLQTDAAENNVCDINTVHGLFATGTIEGRVECWDPRVRKRVGVLDCAL
                     NSVTADSEINSLPTISALKFNGALSMAVGTSTGQVLLYDLRSDKPLLVKDHQYGLPIK
                     SVHFQDSLDLVLSADSRIVKMWNKDSGKIFTSLEPEHDLNDVCLYPSSGMILTANESP
                     KMGIYYIPVLGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLTHLIGS
                     PFLRAYMHGFFMDIRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLPKVN
                     KELALKLIEEEEEKQKSTLKKKVKSLPNILTDDRFKVMFENPDFQVDEDSEEFRLLNP
                     LVSRISEKRKKQLRLLEQQEQLKNEEEEEPEGKPSDAESSESSDDEKDWVEEVRKQRR
                     LLQQEERVKRQEQLKEDQQTVLKPQFYEIKAGEEFRSFKESATKQKLMNKTLEDRLKL
                     EAKHGTLSVSDTTVGSKQLTFTLKRSEQQKKQQEAEKLHRQERKKLRRSASHLRSRPR
                     RGRPFH"
     exon            140..185
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
     exon            186..284
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
     exon            285..362
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
     exon            363..400
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
     exon            401..537
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
     exon            538..603
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
     exon            604..664
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
     exon            665..750
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
     exon            751..829
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
     exon            830..979
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
     exon            980..1046
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
     exon            1047..1099
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
     exon            1100..1226
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
     exon            1227..1306
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
     exon            1307..1405
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
     exon            1406..1495
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
     exon            1496..1669
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
     exon            1670..1917
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
     exon            1918..2020
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
     exon            2021..2821
                     /gene="Nol10"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tttggattca ggcgtattct gctgggccgg cgttctgtga ctgcgtgccg gactccggct
       61 tctctgcgcc gcgatgcagg tctccagcct caacgaagtg aagatttaca gcctcagctg
      121 cggcaagtct ctccctgagt ggctttccga caggaagaag agggcactgc agaagaagga
      181 tgtcgatgtt cgtaggagaa ttgaacttat ccaggacttt gaaatgccta ctgtgtgtac
      241 tactatcaag gtgtcgaaag atggacagta tattttagca actggaacat ataagcctcg
      301 agtccggtgt tatgacacct atcagttatc cctgaaattt gaaaggtgct tggattctga
      361 agttgtcacc tttgagattt tatcagacga ctattcaaag attgtcttct tacataacga
      421 cagatatatt gaatttcact cacaatcagg attttactac aaaaccagaa ttcccaagtt
      481 cggccgagac ttctcttacc actatccatc ctgtgacttg tacttcgtag gtgcaagctc
      541 tgaagtttat agattaaact tagaacaagg gcggtacctg aatcctctcc agacggatgc
      601 tgcggagaac aatgtttgtg acataaacac agtgcatggc ttgttcgcca caggaacaat
      661 agagggtcga gtggaatgct gggatccaag agtaagaaaa agggttggtg tgttagactg
      721 tgcattaaac agtgtcacag cagattcaga gataaacagc ttacccacca tctctgcgtt
      781 gaagtttaat ggagccttga gcatggcagt tggaacatcc acagggcagg tattgttata
      841 tgatcttcgc tcagataagc cattgctagt taaggatcac cagtatggac tgcccattaa
      901 gtcagttcat ttccaggact cactagattt ggttttgtct gcagactcca gaattgtcaa
      961 aatgtggaac aaggactccg ggaagatatt tacttcgttg gagccggaac atgaccttaa
     1021 tgatgtttgc ctctatccca gctcaggaat gattcttact gccaatgaat cccccaagat
     1081 gggcatttac tacattccgg ttttgggtcc tgcccccagg tggtgttcct tcctggacaa
     1141 cttgacagaa gaattagaag agaatccaga gagcacagtg tatgatgatt acaaatttgt
     1201 caccaagaaa gaccttgaaa atttagggct cacacatctc attggatcac ctttcctccg
     1261 agcatatatg catgggtttt tcatggatat cagactctac cacaaggtga aattgatggt
     1321 caatccattt gcttatgaag aatataggaa agataaaatt cgacagaaaa tagaagaaac
     1381 acgtgcacag agagtccagt taaagaaact tccaaaagtt aacaaagaac tggcacttaa
     1441 attaattgaa gaggaagagg agaagcagaa atcgacactg aaaaagaaag ttaagagcct
     1501 ccctaatatc ctcacggacg atcgatttaa agttatgttt gagaaccccg acttccaggt
     1561 ggatgaagac agtgaagagt tcaggcttct caatccactt gtctcgagga ttagtgagaa
     1621 gaggaagaag cagctgagac tcttggagca gcaggagcag ctcaagaatg aagaggagga
     1681 agaaccggaa ggaaaaccca gtgatgcaga aagttcagag agttcagatg atgaaaaaga
     1741 ttgggttgaa gaagtcagga agcaacgcag actcctgcag caggaagaaa gagtgaagcg
     1801 gcaggagcaa ctgaaggagg accaacagac agtcctgaag ccccagttct acgagatcaa
     1861 agcaggcgaa gagttcagga gcttcaaaga gtccgccacc aagcagaaac tgatgaacaa
     1921 aactctggaa gatcgcttga aacttgaagc aaaacatggg accttgagtg tgtcagacac
     1981 cactgttggc agcaagcagt tgacatttac tctcaagagg tctgaacagc aaaagaagca
     2041 acaagaggct gagaaactgc atcgtcagga aaggaaaaag ctgcgtaggt ctgccagcca
     2101 cctgaggtcc agacccagaa gaggccggcc ctttcactga ccaaaggagt gagcctacaa
     2161 acaacttgga aactgtttct ccccatggat tctcacaagg gcatcacacc cagacgaggg
     2221 agtgtggtag ttaaaactac acgtagatgt gtgtgtgtgc atggtgctgg tggtctgacc
     2281 ggcccactac ccggctccag tagtccctgg ctccgggagc tttttccaag tcactgccct
     2341 tttgaatatt gtcttctctc ctgctgatga tcagagaaag cagtcatcat ttctaatatt
     2401 ggaaaggtct acataaaatg aaaagtttta tttctgctgg aaacaacgga ttatcatgtt
     2461 ataagaatgg tttggttttt tggtttggtt ggttggttgg ttggtttgag acagggtttc
     2521 tctatgtagc cttgagtgtc ctggaactca taaagatcca cgtgcctctg cctcctaagt
     2581 gctgaagtta aagggaggca ccaccatgcc agccagaaag tctgtcctca ctgtcttctg
     2641 cccctcagga ctgagtgaag tcctgccctt atttgcccgg tatctgctga ttggccctgt
     2701 ctgtgtgcat gagtatgttt gcaggcttac ttgcttgctt ttgtattcct ttggtatact
     2761 gtttaaacta tttttatatc aagagtgtaa atcaatggta ataaataata agtgaactct
     2821 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//
