LOCUS       NM_001014129            1774 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus nucleolar complex associated 4 homolog (Noc4l),
            mRNA.
ACCESSION   NM_001014129 XM_341101
VERSION     NM_001014129.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC088275.1.
            
            On Apr 20, 2005 this sequence version replaced XM_341101.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC088275.1, SRR8487227.20720.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q16"
     gene            1..1774
                     /gene="Noc4l"
                     /gene_synonym="RGD1310661"
                     /note="nucleolar complex associated 4 homolog"
                     /db_xref="GeneID:360828"
                     /db_xref="RGD:1310661"
     exon            1..147
                     /gene="Noc4l"
                     /gene_synonym="RGD1310661"
                     /inference="alignment:Splign:2.1.0"
     CDS             31..1581
                     /gene="Noc4l"
                     /gene_synonym="RGD1310661"
                     /note="NOC4-like protein; NOC4 protein homolog; nucleolar
                     complex-associated protein 4-like protein"
                     /codon_start=1
                     /product="nucleolar complex protein 4 homolog"
                     /protein_id="NP_001014151.1"
                     /db_xref="GeneID:360828"
                     /db_xref="RGD:1310661"
                     /translation="MERQPASTGSRQELGRLLEAVLSNRGRANAVFDILAVLQSEDPE
                     EIKEGVRTCSRLFGTLLEREELFVGSLPCEDMALAGSQGATYKYKVWMRHRYHSCCNR
                     LEELLTHPSFQVKELALETLMKFVQLEGAKPLEKPQWESHYLFPRTLFRAVVGGLLTP
                     EDDHSLLISQFCEYLEYDDIRYHAMQVATSILARATSRQPEVSLTFWNNAFTLLSAVN
                     LPLQEHELTNFYVKHAQTSSKWKVVHLKEQRKAFQEMWLGFLKHKLPLSLYKKVLVAM
                     HDSILPHLAQPTLMIDFLTSACDVGGAISLLALNGLFILIHKHNLEYPDFYQRLYGLL
                     DPSIFHVKYRARFFHLADLFLSSSHLPAYLVAAFAKRLARLALTAPPEALLMVLPLIC
                     NLLRRHPACRVMVHRPQGPELDADPYDPTEKDPARSRALESCLWELQTLQQHYHPEVS
                     RAASVINQALSVPEVSIAPLLELTAYEIFEQDLKKMMPESVPLEFIPAKGLLGRQDDL
                     CTQFFCLS"
     exon            148..268
                     /gene="Noc4l"
                     /gene_synonym="RGD1310661"
                     /inference="alignment:Splign:2.1.0"
     exon            269..375
                     /gene="Noc4l"
                     /gene_synonym="RGD1310661"
                     /inference="alignment:Splign:2.1.0"
     exon            376..483
                     /gene="Noc4l"
                     /gene_synonym="RGD1310661"
                     /inference="alignment:Splign:2.1.0"
     exon            484..633
                     /gene="Noc4l"
                     /gene_synonym="RGD1310661"
                     /inference="alignment:Splign:2.1.0"
     exon            634..733
                     /gene="Noc4l"
                     /gene_synonym="RGD1310661"
                     /inference="alignment:Splign:2.1.0"
     exon            734..768
                     /gene="Noc4l"
                     /gene_synonym="RGD1310661"
                     /inference="alignment:Splign:2.1.0"
     exon            769..819
                     /gene="Noc4l"
                     /gene_synonym="RGD1310661"
                     /inference="alignment:Splign:2.1.0"
     exon            820..931
                     /gene="Noc4l"
                     /gene_synonym="RGD1310661"
                     /inference="alignment:Splign:2.1.0"
     exon            932..992
                     /gene="Noc4l"
                     /gene_synonym="RGD1310661"
                     /inference="alignment:Splign:2.1.0"
     exon            993..1103
                     /gene="Noc4l"
                     /gene_synonym="RGD1310661"
                     /inference="alignment:Splign:2.1.0"
     exon            1104..1264
                     /gene="Noc4l"
                     /gene_synonym="RGD1310661"
                     /inference="alignment:Splign:2.1.0"
     exon            1265..1347
                     /gene="Noc4l"
                     /gene_synonym="RGD1310661"
                     /inference="alignment:Splign:2.1.0"
     exon            1348..1461
                     /gene="Noc4l"
                     /gene_synonym="RGD1310661"
                     /inference="alignment:Splign:2.1.0"
     exon            1462..1743
                     /gene="Noc4l"
                     /gene_synonym="RGD1310661"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgtcggttcc cgggagcagc tggcggcagc atggagcggc aaccggcatc gacgggctcc
       61 aggcaggagc tcggccgcct gctggaggca gtactgtcga atcgtggccg ggcgaacgcg
      121 gtgttcgaca tcttggctgt gcttcagtcc gaggaccctg aggagatcaa ggaaggagtg
      181 cgcacgtgca gccgactctt cggtaccttg ctggagcggg aagagctgtt cgtgggttcg
      241 ctgccatgcg aagacatggc cctggcagga tcccagggag ccacgtacaa atacaaggtg
      301 tggatgagac accgctacca cagctgctgt aaccgcctgg aggaactcct gacccatccc
      361 tccttccagg tcaaggaact ggccctcgag acgctcatga agttcgtgca gctggaagga
      421 gcgaaacccc tggagaagcc ccagtgggaa agccactacc tcttcccccg cacactcttt
      481 agggcagtgg taggaggcct gctcacacca gaggatgacc acagcctgct tatctcccag
      541 ttctgtgagt acttggaata tgacgacatc cggtaccacg caatgcaggt ggccaccagc
      601 atcttggcgc gggccaccag ccggcaacct gaggtgtcac tcaccttctg gaacaacgcc
      661 ttcacgttgc tgtctgctgt gaacctaccc ctccaagagc atgaactcac caacttctat
      721 gtgaagcacg cacagacatc aagcaagtgg aaggttgttc acttgaagga gcagaggaaa
      781 gctttccagg agatgtggct tggcttcctc aagcacaagc tgcccctcag cctgtacaag
      841 aaggtgctgg tggccatgca tgactccatc ctaccccacc tggctcaacc cacactcatg
      901 atcgacttcc tcacaagtgc ttgtgatgtg ggtggtgcca tcagcctcct ggccttgaac
      961 ggacttttca tcctaatcca caagcataac ctggagtacc ctgacttcta tcaaaggctc
     1021 tatggtctcc tggatccatc catctttcat gtcaagtacc gagcgcgctt ctttcacttg
     1081 gctgacctct tcctttcgtc ctcccacctc cctgcctacc tggtagctgc ctttgccaaa
     1141 cgcctggccc ggctggcgct aacagcacct cctgaggccc tgcttatggt cctgccctta
     1201 atctgcaacc tgctgcgtag acaccctgcc tgccgagtta tggtgcaccg cccacagggc
     1261 cctgagctag atgctgatcc atatgaccca acggagaagg acccagccag gagccgtgcc
     1321 ttggagagct gcctgtggga actgcagacc ctccagcagc actaccaccc agaggtgtcc
     1381 agagctgcca gtgtcatcaa ccaggcactc tctgtccctg aggtcagcat cgcaccactc
     1441 ctggaactta ctgcatatga gatctttgag caggacctga agaagatgat gcctgagtct
     1501 gtgcccctgg agttcatccc agctaaaggc ctgttgggtc gacaggacga cctttgtact
     1561 cagttcttct gtctcagctg acctggctgt cacttctcct aagaagtgct tttgtatgtg
     1621 tgtgtgtctg agacaggatc tcactatgtg agactgacct gtacttgtgg ttctcgagcc
     1681 taagccttcg cagtactgag gttacaaagg tgcgccacaa ataaatggtt tgttttggtt
     1741 ttgaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//
