LOCUS       NM_001108523            2936 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus NOC3-like DNA replication regulator (Noc3l),
            mRNA.
ACCESSION   NM_001108523 XM_001080301 XM_574664
VERSION     NM_001108523.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2936)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 2936)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   3  (bases 1 to 2936)
  AUTHORS   Tominaga,K., Johmura,Y., Nishizuka,M. and Imagawa,M.
  TITLE     Fad24, a mammalian homolog of Noc3p, is a positive regulator in
            adipocyte differentiation
  JOURNAL   J Cell Sci 117 (Pt 25), 6217-6226 (2004)
   PUBMED   15564382
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473953.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001080301.1, XM_574664.2.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2936
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q53"
     gene            1..2936
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /note="NOC3-like DNA replication regulator"
                     /db_xref="GeneID:361753"
                     /db_xref="RGD:1560656"
     exon            1..108
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
     CDS             100..2499
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /note="nucleolar complex associated 3 homolog"
                     /codon_start=1
                     /product="nucleolar complex protein 3 homolog"
                     /protein_id="NP_001101993.1"
                     /db_xref="GeneID:361753"
                     /db_xref="RGD:1560656"
                     /translation="MKARRNKKQVPSFRKLIKTSKVKLENKLKNKQFKQQSTIKKYRK
                     EQRKLRQAVKDAVSKKPFPLEDPKSKRPVKRIEREEEDEEEALPLDMLDEDDLQLIKD
                     LGQKASFLTRDLSSSEPVHIKKRKHESVIEKYEKVPRTLQTAPEKELIHLLPIKDKSG
                     IIPQTREKPVTAIQQEEEEEEEPEVEEEVIEEPRQELTIEEHVIERKKKLQDKKIQIA
                     TLASAILSDPESHIKKLKELRAMLMEQDPDVAVTVRKLAIISLMELFKDITPSYKIRP
                     LTEAEKSAKIRKETQKLREFEEGLVSQYKFYLENLEQIVKDWKQRKLKKSNVVSLKAY
                     KGLAEVAVKSLCELLVALPHFNFHNNIIVLIVPLMNDGSKSVSEMCCEAVKKLFKQDK
                     LGQASLGVIKVISGFVKGRNYEVRPEMLKTFLCLRIKEVEVKKDTEDINKPKRFMTFK
                     EKRKTLSRMQRKWKKAEEKLERELREAEASESTEKKLKLHTETLNIVFVTYFRILKKA
                     QKSPLLPAVLEGLAKFAHLINVEFFDDLLVVLHTLIESGDLSYQESLHCVQTAFHILS
                     GQGDVLNIDPMKFYTHLYKTLFTLHAGATNDGIEIVLHCLDVMLTKRRKQVSHQRALA
                     FIKRLCTLALQVLPNSSIGLLAMTRILMHTFPRTDLLLDNESQGSGVFLPELEEPEYC
                     NAQNTALWELHALRRHYHPIVRRFAAHLLAGAPSEGSEALKPELSRRSALELFEAYSM
                     AEMTFNPPVESFNSKKKDKFLQGDAFLNEDLNQLIKRYCDEAAPERPLDFTKCLKTSS
                     R"
     exon            109..316
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
     exon            317..449
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
     exon            450..607
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
     exon            608..661
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
     exon            662..792
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
     exon            793..954
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
     exon            955..1048
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
     exon            1049..1224
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
     exon            1225..1353
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
     exon            1354..1485
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
     exon            1486..1566
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
     exon            1567..1667
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
     exon            1668..1740
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
     exon            1741..1804
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
     exon            1805..1876
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
     exon            1877..2058
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
     exon            2059..2187
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
     exon            2188..2285
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
     exon            2286..2370
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
     exon            2371..2936
                     /gene="Noc3l"
                     /gene_synonym="RGD1560656"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaaaggttga gctctgggca cgtgtgtgtt tcctacgggg ctcctgcgtg tccctctgac
       61 tgggtgatct tgactgtggt actcctttca ggcctaagga tgaaggcgag aagaaataaa
      121 aagcaggtcc caagctttcg caagttgata aaaactagta aagtgaaact tgaaaacaaa
      181 ctgaaaaata agcaatttaa acagcaaagt actatcaaga agtaccgaaa ggagcagaga
      241 aaattaaggc aagctgtcaa agatgctgtg tctaaaaaac cctttccatt ggaggaccca
      301 aagagcaaac gaccagttaa aaggatcgag agggaagagg aagatgagga agaagccctt
      361 cctttagata tgctggatga ggatgactta cagctgataa aagatttagg acagaaagca
      421 tcttttctca cacgagatct ttcctctagt gagccagttc acatcaagaa gcgaaagcat
      481 gagagtgtca tagagaaata tgaaaaggtg ccaagaactc tgcaaactgc accagagaag
      541 gagttgatcc acctgcttcc tatcaaggat aagagcggta taatcccgca gactcgggag
      601 aagccagtca ctgccatcca gcaagaggag gaggaggaag aggagccgga ggttgaggaa
      661 gaggttattg aagaacccag gcaagagctg accatagaag agcatgtgat tgagagaaag
      721 aagaagctgc aggacaagaa aatacagatt gcaaccttgg catctgctat tctgtcagat
      781 ccagaaagtc atattaaaaa actgaaggag cttcgtgcca tgctgatgga gcaggaccct
      841 gatgtggctg tcactgtccg gaagttggct atcatctcac tgatggagct gtttaaggac
      901 atcactccct catataagat ccggccctta actgaagcag aaaaatctgc caagattcgt
      961 aaagaaaccc agaaattaag agaatttgaa gaaggcctag tgagccaata caaattttat
     1021 ttggaaaatc tggagcaaat agttaaagac tggaagcaga ggaagctgaa gaagagcaac
     1081 gtggtgtccc taaaggccta caaagggctg gctgaagtgg cggtgaagag cctctgtgag
     1141 ctgttggtgg ccttgcccca ttttaacttt cacaacaaca tcattgtact gattgtccct
     1201 ctgatgaatg atggctcaaa atcggtgtct gagatgtgtt gcgaagcagt gaagaagctc
     1261 tttaaacaag ataaactagg ccaagcttct cttggtgtaa ttaaagtgat ctctggtttt
     1321 gtgaagggca gaaattatga agttagacca gagatgttaa aaacatttct atgcctgcga
     1381 atcaaggaag tggaagtgaa aaaagataca gaggacatta acaaaccaaa aaggttcatg
     1441 actttcaagg aaaagagaaa aactctatca agaatgcaaa gaaagtggaa gaaagcagaa
     1501 gagaaactgg agcgggaact tcgggaggcc gaagcgtcgg agagcactga gaagaagctg
     1561 aagctgcaca cagagactct gaatattgtg tttgtgacct acttcagaat attgaagaag
     1621 gcccagaagt cacctcttct gccagcggtt ttagagggtc tcgccaagtt tgcacatctt
     1681 ataaatgtgg agttttttga tgatttatta gtggttcttc ataccctcat tgagtctggt
     1741 gatctaagtt atcaagaaag tcttcactgc gttcagactg cttttcatat tctttctgga
     1801 caaggtgatg ttttaaatat tgacccgatg aagttctata cacatctcta caagaccctc
     1861 ttcacattgc atgcaggtgc taccaacgac ggcattgaga ttgtgctcca ctgccttgat
     1921 gtcatgctaa ccaagcgcag aaagcaggtt tctcatcagc gagctcttgc cttcatcaaa
     1981 cgcctttgta cgcttgctct gcaggttctt ccaaattcaa gcatcggcct tttagcaatg
     2041 accaggatat tgatgcacac ttttcccaga acagatctct tgcttgacaa tgagtctcag
     2101 ggtagcgggg tgtttctccc tgagctggag gagccggagt actgtaatgc acagaacacc
     2161 gcgctgtggg agctacacgc acttcggaga cattaccatc ccattgtgcg aagatttgca
     2221 gcacatctgc ttgctggggc accatctgag gggtctgagg ccctcaagcc tgagctgagc
     2281 cgaagatctg cacttgaact ttttgaggct tacagcatgg cagaaatgac attcaaccca
     2341 cctgttgaat ctttcaactc caaaaagaag gataaatttt tacaaggaga cgcatttttg
     2401 aatgaagatt taaatcaact aatcaaaaga tactgtgatg aagctgctcc tgagagacca
     2461 ctggatttca ccaagtgttt gaaaacatca tcacggtagt acagagtcag tggactgtct
     2521 tatatgtttg tatgtgcata tacagaaaca catacagata tgtgagggcc tgtttctttt
     2581 tgtacacgga agacttcctg agactgatta tatgagaact gaagcagagc caccgaagac
     2641 actgcttctt ggcttgcttt tcatgccttg ctcagcttac tttttataca gtccacatca
     2701 actttccagg aatggcactg cctgtcagct acgaattctg taaatgccct acagacacac
     2761 caccgcctag tctaatggag gcagcttcat tgagatttcc tcctctcagg tgactccagt
     2821 gtatgttaag tcaacaaaac ctaaacaaga cagttattaa attctcttta taagtaaata
     2881 aatactgtta ttgcaccatc tatgaaagca aataaaagag attttgtgat tttttt
//
