LOCUS       XM_008760774            3447 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus nicotinamide nucleotide
            transhydrogenase (Nnt), transcript variant X3, mRNA.
ACCESSION   XM_008760774
VERSION     XM_008760774.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008760774.3.
            
            On Jan 21, 2021 this sequence version replaced XM_008760774.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3447
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3447
                     /gene="Nnt"
                     /note="nicotinamide nucleotide transhydrogenase; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 59 ESTs, 2 long SRA reads, 12 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 201 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:310378"
                     /db_xref="RGD:1587346"
     CDS             187..3447
                     /gene="Nnt"
                     /codon_start=1
                     /product="NAD(P) transhydrogenase, mitochondrial isoform
                     X2"
                     /protein_id="XP_008758996.1"
                     /db_xref="GeneID:310378"
                     /db_xref="RGD:1587346"
                     /translation="MAHLLKTVVTGCLCPSVSNLGSCKVLPGKKDFLRTFRTHQALWC
                     KSPAKPGIPYKQLTVGVPKEIFQNEKRVALSPAGVQALVKQGFNVVVESGAGEASKFP
                     DDLYRAAGAQIQGTKEVLASDLVVKVRAPMVNPTLGAHEADFLKPSGTLISFIYPAQN
                     PDLLNKLSERKTTVLAMDQVPRVTIAQGYDALSSMANISGYKAVVLAANHFGRFFTGQ
                     ITAAGKVPPAKILIVGGGVAGLASAGAAKSMGAVVRGFDTRAAALEQFKSLGAEPLEV
                     DLKESGEGQGGYAKEMSKEFIEAEMKLFAQQCKEVDILISTALIPGKKAPVLFSKEMI
                     ESMKEGSVVVDLAAEAGGNFETTKPGELYVHKGITHIGYTDLPSRMATQASTLYSNNI
                     TKLLKAISPDKDNFHFEVKDDFDFGTMSHVIRGTVVMKDGNVIFPAPTPKNIPKEAPA
                     KQKTVAELEAEKAGTVSMYTKTLRTASVYSAGLTGMLGLGIVAPNLAFSQMVTTFGLA
                     GIIGYHTVWGVTPALHSPLMSVTNAISGLTAVGGLALMGGHFYPSTTSQSLAALATFI
                     SSVNIAGGFLVTQRMLDMFKRPTDPPEYNYLYLLPGGTFVGGYLAALYGGYNIEEIMY
                     LGSGLCCVGALGGLSTQGTARLGNALGMIGVAGGLAATLGGLKPDPQLLAQMSGAMAM
                     GGTIGLAIAKRIQISDLPQLVAAFHSLVGLAAVLTCMAEYIVEYPHFAMDATSNFTKI
                     VAYIGTYIGGVTFSGSLVAYGKLQGILKSAPLLLPGRHALNAGLLAASVGGIIPFMAD
                     PSFTTGIMCLGSVSALSTLMGVTLTAAIGGADMPVVITVLNSYSGWALCAEGFLLNNN
                     LLTIVGALIGSSGAILSYIMCVAMNRSLANVILGGYGTTSTAGGKPMEISGTHTEINL
                     DNAVEMIREANSIVITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPVAGRMPGQ
                     LNVLLAEAGVPYDIVLEMDEINSDFPDTDLVLVIGANDTVNSAAQEDPNSIIAGMPVL
                     EVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNTAMLLGDAKKTCDALQAKVRESYQK"
ORIGIN      
        1 ccgccctggg cttcttcccg cctaagtctt ctccagttac agaagtttgg gttttttttc
       61 ctagagagtt tgacgaaagt ccggccccaa gagtggagtt atagtatccg tttatttgtt
      121 ctgctgggag acggtaaacc accttcgagg aattggggat ttgaaaagtt gggagcgcaa
      181 agcaacatgg cacatctact gaaaacggtg gtgactggct gtttatgtcc ttctgttagc
      241 aatttggggt cctgtaaggt tctacctggg aagaaagact ttttacgaac atttcgtacc
      301 caccaggcac tgtggtgtaa atccccggca aaaccaggaa ttccatataa gcagttgaca
      361 gttggggtcc ccaaggagat tttccaaaat gagaagcgag ttgccttgtc tcctgctggt
      421 gtccaggccc tggtcaagca gggttttaac gttgttgtgg aatcaggagc aggcgaagct
      481 tccaaattcc cagatgatct ctacagagca gcaggggccc agatccaagg aacgaaggaa
      541 gttctggctt ctgatctggt ggtcaaagtg agggccccca tggtgaaccc gacgttaggt
      601 gctcatgaag ctgacttttt aaagccctca ggaactctaa ttagcttcat ttacccagcc
      661 caaaatccag acttgctaaa taaactctcc gaaagaaaaa ctacagtttt ggcgatggac
      721 caggttccga gggtgacaat agctcagggc tatgatgctc tcagctccat ggccaacatt
      781 tctggttata aggctgttgt tttagcagcc aatcattttg gaaggttttt cactggtcag
      841 atcacagctg ctggaaaagt ccccccagcg aagatcctga tagttggtgg tggcgttgcc
      901 gggctcgctt ctgcaggggc agcaaagtca atgggcgcag ttgtccgagg atttgataca
      961 agagctgccg ccttggaaca gttcaaatcc cttggtgctg aacccttgga ggtggacttg
     1021 aaggagtctg gtgagggcca aggaggatac gcgaaggaga tgtccaaaga gtttattgag
     1081 gcggaaatga agctctttgc tcagcaatgc aaggaagtgg acatccttat cagcacagct
     1141 ctgattccag gtaagaaagc tcctgttcta tttagtaaag aaatgatcga gtccatgaag
     1201 gaaggttcag tagttgtgga tttagctgct gaggccggcg gaaactttga aacgactaaa
     1261 ccgggagaac tttacgttca taagggaatc actcatattg gctacacaga cctccccagc
     1321 cgcatggcca ctcaggctag cactctgtac tccaacaaca tcaccaagct cctgaaggcc
     1381 atcagccccg acaaggacaa ttttcacttt gaagtgaagg atgactttga ctttggtaca
     1441 atgagtcacg tcattcgagg aaccgtggtg atgaaggatg gcaatgtgat tttcccagct
     1501 cccacaccaa aaaatattcc caaagaagcc ccagccaaac agaagaccgt ggctgagctg
     1561 gaagcagaga aggcaggcac tgtctcaatg tacacgaaga cactgaggac agcatccgtg
     1621 tattcagcag gtctcaccgg gatgctaggt ttgggcatcg tggcccccaa tctagccttt
     1681 tctcagatgg tgaccacctt tggcctggcg ggcattattg gttaccacac tgtctgggga
     1741 gtgacccctg ctctccactc accactgatg tctgtgacca atgctatctc aggtttgact
     1801 gcagttggtg ggctggcgtt gatgggaggg catttttatc cctccacaac ttcccagagt
     1861 cttgctgctc ttgctacatt catatcgtca gtcaacattg caggtggttt tctggtgact
     1921 cagagaatgt tggacatgtt caagcgaccc acggaccctc cagaatacaa ttacctgtat
     1981 ctgctccctg gcggcacctt cgtgggggga tatttagcag ctctctacgg tggttataac
     2041 atcgaagaaa tcatgtacct gggctcaggt ttgtgctgtg ttggggccct gggcggcctt
     2101 tccactcagg gaacagctcg actcggcaat gccttgggca tgattggggt tgcaggaggc
     2161 ctggcagcta cccttggagg cctgaagccg gacccacagc tgttagctca gatgtccgga
     2221 gcaatggcga tgggcggcac catcggactg gcgattgcaa agcggatcca gatctccgac
     2281 ctgcctcaac tggttgctgc tttccacagt ttagtgggtc tggcggcagt gctcacatgc
     2341 atggccgagt acatcgtgga gtatccacat ttcgcaatgg atgccacttc aaatttcacc
     2401 aagattgtgg cctacattgg cacttacatc ggcggagtca cctttagtgg gtctctggtt
     2461 gcctacggaa aattacaggg tattctgaag tcagcccctc tgctgctccc tggaaggcac
     2521 gcgctcaatg caggcttgct ggctgctagc gtggggggaa taatcccatt tatggctgac
     2581 cctagtttta ccacaggcat catgtgtctg ggctctgtgt ccgcactctc tactctgatg
     2641 ggtgtgacct tgacagctgc cattggcggt gctgacatgc ctgttgttat cactgtgcta
     2701 aacagctact ccggctgggc tctgtgtgcg gagggcttcc tgctcaacaa caacctgttg
     2761 accattgtgg gagcactcat cggctcctcg ggcgccatct tgtcgtacat catgtgtgtg
     2821 gcaatgaacc gttccctggc aaatgtaatt ctcggaggct atggtacgac ttcaacagct
     2881 ggtggaaaac ccatggaaat ttccggcaca catacagaaa tcaacctgga caatgcagtc
     2941 gagatgatcc gggaagctaa cagcattgtt attactccag gatatgggct ctgtgcagct
     3001 aaagctcagt accccattgc cgatttggtg aagatgctta ccgaacaagg caagaaagtc
     3061 aggtttggaa tccacccagt tgcgggccga atgcctggtc agcttaatgt gctcctggcc
     3121 gaggcaggag tgccctatga tattgtgcta gaaatggatg agatcaacag tgatttccca
     3181 gataccgatc tggttcttgt cattggagct aatgacaccg tgaattcagc ggctcaggaa
     3241 gaccccaatt ctattattgc aggcatgcca gtcctcgagg tctggaagtc caaacaggtc
     3301 attgtcatga agaggtccct tggtgttggc tacgctgcag tggacaatcc aatcttctac
     3361 aaacctaaca cagccatgct tctgggggac gccaagaaga catgtgatgc tctgcaggcc
     3421 aaagttcgag aatcctatca gaagtga
//
