LOCUS       XM_006231969            3449 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus nicotinamide nucleotide
            transhydrogenase (Nnt), transcript variant X4, mRNA.
ACCESSION   XM_006231969
VERSION     XM_006231969.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006231969.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006231969.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3449
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3449
                     /gene="Nnt"
                     /note="nicotinamide nucleotide transhydrogenase; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 56 ESTs, 2 long SRA reads, 12 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 165 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:310378"
                     /db_xref="RGD:1587346"
     CDS             189..3449
                     /gene="Nnt"
                     /codon_start=1
                     /product="NAD(P) transhydrogenase, mitochondrial isoform
                     X2"
                     /protein_id="XP_006232031.1"
                     /db_xref="GeneID:310378"
                     /db_xref="RGD:1587346"
                     /translation="MAHLLKTVVTGCLCPSVSNLGSCKVLPGKKDFLRTFRTHQALWC
                     KSPAKPGIPYKQLTVGVPKEIFQNEKRVALSPAGVQALVKQGFNVVVESGAGEASKFP
                     DDLYRAAGAQIQGTKEVLASDLVVKVRAPMVNPTLGAHEADFLKPSGTLISFIYPAQN
                     PDLLNKLSERKTTVLAMDQVPRVTIAQGYDALSSMANISGYKAVVLAANHFGRFFTGQ
                     ITAAGKVPPAKILIVGGGVAGLASAGAAKSMGAVVRGFDTRAAALEQFKSLGAEPLEV
                     DLKESGEGQGGYAKEMSKEFIEAEMKLFAQQCKEVDILISTALIPGKKAPVLFSKEMI
                     ESMKEGSVVVDLAAEAGGNFETTKPGELYVHKGITHIGYTDLPSRMATQASTLYSNNI
                     TKLLKAISPDKDNFHFEVKDDFDFGTMSHVIRGTVVMKDGNVIFPAPTPKNIPKEAPA
                     KQKTVAELEAEKAGTVSMYTKTLRTASVYSAGLTGMLGLGIVAPNLAFSQMVTTFGLA
                     GIIGYHTVWGVTPALHSPLMSVTNAISGLTAVGGLALMGGHFYPSTTSQSLAALATFI
                     SSVNIAGGFLVTQRMLDMFKRPTDPPEYNYLYLLPGGTFVGGYLAALYGGYNIEEIMY
                     LGSGLCCVGALGGLSTQGTARLGNALGMIGVAGGLAATLGGLKPDPQLLAQMSGAMAM
                     GGTIGLAIAKRIQISDLPQLVAAFHSLVGLAAVLTCMAEYIVEYPHFAMDATSNFTKI
                     VAYIGTYIGGVTFSGSLVAYGKLQGILKSAPLLLPGRHALNAGLLAASVGGIIPFMAD
                     PSFTTGIMCLGSVSALSTLMGVTLTAAIGGADMPVVITVLNSYSGWALCAEGFLLNNN
                     LLTIVGALIGSSGAILSYIMCVAMNRSLANVILGGYGTTSTAGGKPMEISGTHTEINL
                     DNAVEMIREANSIVITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPVAGRMPGQ
                     LNVLLAEAGVPYDIVLEMDEINSDFPDTDLVLVIGANDTVNSAAQEDPNSIIAGMPVL
                     EVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNTAMLLGDAKKTCDALQAKVRESYQK"
ORIGIN      
        1 gtttgattga cagacggatt gagcaagagc aagggggcag gactgcaggc ctggggccct
       61 ggtagagaca aaggggcttc ggcggccacc cggagaggaa ggaccctttg tctcggacca
      121 gctgctgcgc tgtaagtaaa ccaccttcga ggaattgggg atttgaaaag ttgggagcgc
      181 aaagcaacat ggcacatcta ctgaaaacgg tggtgactgg ctgtttatgt ccttctgtta
      241 gcaatttggg gtcctgtaag gttctacctg ggaagaaaga ctttttacga acatttcgta
      301 cccaccaggc actgtggtgt aaatccccgg caaaaccagg aattccatat aagcagttga
      361 cagttggggt ccccaaggag attttccaaa atgagaagcg agttgccttg tctcctgctg
      421 gtgtccaggc cctggtcaag cagggtttta acgttgttgt ggaatcagga gcaggcgaag
      481 cttccaaatt cccagatgat ctctacagag cagcaggggc ccagatccaa ggaacgaagg
      541 aagttctggc ttctgatctg gtggtcaaag tgagggcccc catggtgaac ccgacgttag
      601 gtgctcatga agctgacttt ttaaagccct caggaactct aattagcttc atttacccag
      661 cccaaaatcc agacttgcta aataaactct ccgaaagaaa aactacagtt ttggcgatgg
      721 accaggttcc gagggtgaca atagctcagg gctatgatgc tctcagctcc atggccaaca
      781 tttctggtta taaggctgtt gttttagcag ccaatcattt tggaaggttt ttcactggtc
      841 agatcacagc tgctggaaaa gtccccccag cgaagatcct gatagttggt ggtggcgttg
      901 ccgggctcgc ttctgcaggg gcagcaaagt caatgggcgc agttgtccga ggatttgata
      961 caagagctgc cgccttggaa cagttcaaat cccttggtgc tgaacccttg gaggtggact
     1021 tgaaggagtc tggtgagggc caaggaggat acgcgaagga gatgtccaaa gagtttattg
     1081 aggcggaaat gaagctcttt gctcagcaat gcaaggaagt ggacatcctt atcagcacag
     1141 ctctgattcc aggtaagaaa gctcctgttc tatttagtaa agaaatgatc gagtccatga
     1201 aggaaggttc agtagttgtg gatttagctg ctgaggccgg cggaaacttt gaaacgacta
     1261 aaccgggaga actttacgtt cataagggaa tcactcatat tggctacaca gacctcccca
     1321 gccgcatggc cactcaggct agcactctgt actccaacaa catcaccaag ctcctgaagg
     1381 ccatcagccc cgacaaggac aattttcact ttgaagtgaa ggatgacttt gactttggta
     1441 caatgagtca cgtcattcga ggaaccgtgg tgatgaagga tggcaatgtg attttcccag
     1501 ctcccacacc aaaaaatatt cccaaagaag ccccagccaa acagaagacc gtggctgagc
     1561 tggaagcaga gaaggcaggc actgtctcaa tgtacacgaa gacactgagg acagcatccg
     1621 tgtattcagc aggtctcacc gggatgctag gtttgggcat cgtggccccc aatctagcct
     1681 tttctcagat ggtgaccacc tttggcctgg cgggcattat tggttaccac actgtctggg
     1741 gagtgacccc tgctctccac tcaccactga tgtctgtgac caatgctatc tcaggtttga
     1801 ctgcagttgg tgggctggcg ttgatgggag ggcattttta tccctccaca acttcccaga
     1861 gtcttgctgc tcttgctaca ttcatatcgt cagtcaacat tgcaggtggt tttctggtga
     1921 ctcagagaat gttggacatg ttcaagcgac ccacggaccc tccagaatac aattacctgt
     1981 atctgctccc tggcggcacc ttcgtggggg gatatttagc agctctctac ggtggttata
     2041 acatcgaaga aatcatgtac ctgggctcag gtttgtgctg tgttggggcc ctgggcggcc
     2101 tttccactca gggaacagct cgactcggca atgccttggg catgattggg gttgcaggag
     2161 gcctggcagc tacccttgga ggcctgaagc cggacccaca gctgttagct cagatgtccg
     2221 gagcaatggc gatgggcggc accatcggac tggcgattgc aaagcggatc cagatctccg
     2281 acctgcctca actggttgct gctttccaca gtttagtggg tctggcggca gtgctcacat
     2341 gcatggccga gtacatcgtg gagtatccac atttcgcaat ggatgccact tcaaatttca
     2401 ccaagattgt ggcctacatt ggcacttaca tcggcggagt cacctttagt gggtctctgg
     2461 ttgcctacgg aaaattacag ggtattctga agtcagcccc tctgctgctc cctggaaggc
     2521 acgcgctcaa tgcaggcttg ctggctgcta gcgtgggggg aataatccca tttatggctg
     2581 accctagttt taccacaggc atcatgtgtc tgggctctgt gtccgcactc tctactctga
     2641 tgggtgtgac cttgacagct gccattggcg gtgctgacat gcctgttgtt atcactgtgc
     2701 taaacagcta ctccggctgg gctctgtgtg cggagggctt cctgctcaac aacaacctgt
     2761 tgaccattgt gggagcactc atcggctcct cgggcgccat cttgtcgtac atcatgtgtg
     2821 tggcaatgaa ccgttccctg gcaaatgtaa ttctcggagg ctatggtacg acttcaacag
     2881 ctggtggaaa acccatggaa atttccggca cacatacaga aatcaacctg gacaatgcag
     2941 tcgagatgat ccgggaagct aacagcattg ttattactcc aggatatggg ctctgtgcag
     3001 ctaaagctca gtaccccatt gccgatttgg tgaagatgct taccgaacaa ggcaagaaag
     3061 tcaggtttgg aatccaccca gttgcgggcc gaatgcctgg tcagcttaat gtgctcctgg
     3121 ccgaggcagg agtgccctat gatattgtgc tagaaatgga tgagatcaac agtgatttcc
     3181 cagataccga tctggttctt gtcattggag ctaatgacac cgtgaattca gcggctcagg
     3241 aagaccccaa ttctattatt gcaggcatgc cagtcctcga ggtctggaag tccaaacagg
     3301 tcattgtcat gaagaggtcc cttggtgttg gctacgctgc agtggacaat ccaatcttct
     3361 acaaacctaa cacagccatg cttctggggg acgccaagaa gacatgtgat gctctgcagg
     3421 ccaaagttcg agaatcctat cagaagtga
//
