LOCUS       XM_039104813            1597 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus N-myc (and STAT) interactor (Nmi),
            transcript variant X3, mRNA.
ACCESSION   XM_039104813
VERSION     XM_039104813.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039104813.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1597
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1597
                     /gene="Nmi"
                     /note="N-myc (and STAT) interactor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     ESTs, 6 long SRA reads, 7 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 137 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:311021"
                     /db_xref="RGD:1311721"
     CDS             297..1232
                     /gene="Nmi"
                     /codon_start=1
                     /product="N-myc-interactor isoform X1"
                     /protein_id="XP_038960741.1"
                     /db_xref="GeneID:311021"
                     /db_xref="RGD:1311721"
                     /translation="MDNNVRQAYEECSPEKDIMRGEQSKGLLHEIMRENSKLDEEIKK
                     LEAELQSNAREFQIKENVPERKLKFTSVERPEDGDHFSNSSCSFQVNSQILYEVQRGQ
                     ALITFEKEEVAQNVISMGTHVVQMEGTSVKVSAHPVPLSTGVRFQVHVDISKMKINVT
                     GIPDELSEEQTRDKLELSFYKSKNGGGEVESVDYDRKSRSAVITFVVAGVADKILKKK
                     TYPLYMNQKWYNVTVSPFIERRLEKYQVFSAVSKKTVLLTGLDGIRVDEETGEDLLNI
                     HFQRKNNGGGEVEVVKCSLDQSFIACFEEEARGTT"
ORIGIN      
        1 ttcctggtct gtcttgtgct ggtgtcaaac tttgtaaccg tctagcaaat tacagaggga
       61 atttgcgtag agagccctgg tttccataca gtttttttca acagcgcgtt ccgcagaatg
      121 cacacaaata agcttttcaa agcaggtctt ggaattactg ccagtataga aacagcagca
      181 atggcgcccg ggacgaggtc cgcagggcaa ggagcagaag catcctgttt ctgaaataaa
      241 cgaaagtgaa agaacggcct gtgactgagc ctgctcattg cagaggccag ggcgtcatgg
      301 ataacaacgt aaggcaagct tatgaagagt gctcaccaga gaaggacatc atgagaggcg
      361 aacaaagcaa gggattactt catgaaatta tgagggaaaa cagcaagcta gacgaggaga
      421 tcaaaaaact tgaagctgaa ttgcagtcga atgccagaga attccaaatt aaagagaatg
      481 taccagaaag aaagcttaaa ttcacctctg tggagagacc cgaggatgga gaccatttct
      541 caaatagctc ctgttcattt caagtgaact cgcaaattct ttatgaggta cagagaggac
      601 aagcgcttat cacctttgag aaggaagaag ttgcacagaa cgtgatatcg atggggacgc
      661 atgtcgtgca gatggaaggc acctcggtga aggtctctgc acacccagtc ccactgagca
      721 caggtgtcag atttcaggtt catgtggaca tttctaaaat gaagatcaat gttacgggga
      781 ttcccgatga actgtctgag gagcagacaa gggacaagct ggagctgagc ttctataagt
      841 ccaagaatgg cggcggagaa gtggaaagtg tagactatga caggaagtcc agaagcgctg
      901 tcatcacatt tgtggtagct ggagttgctg acaagatttt gaaaaagaaa acctatcctc
      961 tctacatgaa tcagaagtgg tataacgtga ctgtttcccc atttatagaa agacgcttgg
     1021 aaaagtacca ggtgttttca gctgtgtcca agaagacagt acttctgact ggattagacg
     1081 gcattcgtgt agatgaggag actggggaag acttactcaa catccacttc caacggaaga
     1141 ataacggagg gggagaagtg gaggtggtca agtgttctct agatcagtcc ttcatagcat
     1201 gtttcgaaga agaggccaga ggaaccacat gaaacttaca gctctgagcc caaatcattg
     1261 tcaacattta tgaaatattg ttttccttaa caatattttt catttgccag tgtcttctta
     1321 ttctcggatg caaaatctac tcctaagcct taaaattctt ctttgtttgc tctactgtgg
     1381 atttagaaac accagagtgg cctgcgtggg aggagtttgt ttcctaatct ctatggctga
     1441 actctttgac tctcaggaaa cactcagcgg tgggtgccct ttgcccctgc tctctgtctc
     1501 tgtcgtaatc atatgagcca attccatttt gggcccttgc tcagaaatat gtagatctga
     1561 tgcataatgt cttccaaaat aaatccagtt caattta
//
