LOCUS       XM_039104812            1838 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus N-myc (and STAT) interactor (Nmi),
            transcript variant X2, mRNA.
ACCESSION   XM_039104812
VERSION     XM_039104812.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039104812.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1838
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1838
                     /gene="Nmi"
                     /note="N-myc (and STAT) interactor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     ESTs, 5 long SRA reads, 7 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 26 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:311021"
                     /db_xref="RGD:1311721"
     CDS             538..1473
                     /gene="Nmi"
                     /codon_start=1
                     /product="N-myc-interactor isoform X1"
                     /protein_id="XP_038960740.1"
                     /db_xref="GeneID:311021"
                     /db_xref="RGD:1311721"
                     /translation="MDNNVRQAYEECSPEKDIMRGEQSKGLLHEIMRENSKLDEEIKK
                     LEAELQSNAREFQIKENVPERKLKFTSVERPEDGDHFSNSSCSFQVNSQILYEVQRGQ
                     ALITFEKEEVAQNVISMGTHVVQMEGTSVKVSAHPVPLSTGVRFQVHVDISKMKINVT
                     GIPDELSEEQTRDKLELSFYKSKNGGGEVESVDYDRKSRSAVITFVVAGVADKILKKK
                     TYPLYMNQKWYNVTVSPFIERRLEKYQVFSAVSKKTVLLTGLDGIRVDEETGEDLLNI
                     HFQRKNNGGGEVEVVKCSLDQSFIACFEEEARGTT"
ORIGIN      
        1 ttgtaaccgt ctagcaaatt acagagggaa tttgcgtaga gagccctggt ttccatacag
       61 tttttttcaa cagcgcgttc cgcagaatgc acacaaataa gcttttcaaa gcaggtcttg
      121 gaattactgc cagtatagaa acagcagcaa tggcgcccgg gacgaggtcc gcagggcaag
      181 gagcagaagc atcctgtttc tgaaataaac gaaagtgaaa gaacggcctg tgactgagcc
      241 tgctcattgc agaggccagg tttgtgtttc cgaggtgggg ttcggttcta ccggcgctgc
      301 cggcttccga gcgctgcgcg gcagagaggc atactgagac tgggctaaca ccggcgtcac
      361 agctgacatc ctgtgttagc agtgccttca ccgagctccc tcctatacaa ttagagatgt
      421 gagtttcttc aagctacaga tgacatttgg ctggaaatca cagggcaatc cagactctga
      481 caatagggaa aaattacaaa gcaaagagga caaagtttct tccataaagg gggcgtcatg
      541 gataacaacg taaggcaagc ttatgaagag tgctcaccag agaaggacat catgagaggc
      601 gaacaaagca agggattact tcatgaaatt atgagggaaa acagcaagct agacgaggag
      661 atcaaaaaac ttgaagctga attgcagtcg aatgccagag aattccaaat taaagagaat
      721 gtaccagaaa gaaagcttaa attcacctct gtggagagac ccgaggatgg agaccatttc
      781 tcaaatagct cctgttcatt tcaagtgaac tcgcaaattc tttatgaggt acagagagga
      841 caagcgctta tcacctttga gaaggaagaa gttgcacaga acgtgatatc gatggggacg
      901 catgtcgtgc agatggaagg cacctcggtg aaggtctctg cacacccagt cccactgagc
      961 acaggtgtca gatttcaggt tcatgtggac atttctaaaa tgaagatcaa tgttacgggg
     1021 attcccgatg aactgtctga ggagcagaca agggacaagc tggagctgag cttctataag
     1081 tccaagaatg gcggcggaga agtggaaagt gtagactatg acaggaagtc cagaagcgct
     1141 gtcatcacat ttgtggtagc tggagttgct gacaagattt tgaaaaagaa aacctatcct
     1201 ctctacatga atcagaagtg gtataacgtg actgtttccc catttataga aagacgcttg
     1261 gaaaagtacc aggtgttttc agctgtgtcc aagaagacag tacttctgac tggattagac
     1321 ggcattcgtg tagatgagga gactggggaa gacttactca acatccactt ccaacggaag
     1381 aataacggag ggggagaagt ggaggtggtc aagtgttctc tagatcagtc cttcatagca
     1441 tgtttcgaag aagaggccag aggaaccaca tgaaacttac agctctgagc ccaaatcatt
     1501 gtcaacattt atgaaatatt gttttcctta acaatatttt tcatttgcca gtgtcttctt
     1561 attctcggat gcaaaatcta ctcctaagcc ttaaaattct tctttgtttg ctctactgtg
     1621 gatttagaaa caccagagtg gcctgcgtgg gaggagtttg tttcctaatc tctatggctg
     1681 aactctttga ctctcaggaa acactcagcg gtgggtgccc tttgcccctg ctctctgtct
     1741 ctgtcgtaat catatgagcc aattccattt tgggcccttg ctcagaaata tgtagatctg
     1801 atgcataatg tcttccaaaa taaatccagt tcaattta
//
