LOCUS       XM_039104811            1666 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus N-myc (and STAT) interactor (Nmi),
            transcript variant X1, mRNA.
ACCESSION   XM_039104811
VERSION     XM_039104811.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039104811.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1666
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1666
                     /gene="Nmi"
                     /note="N-myc (and STAT) interactor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 23
                     ESTs, 12 long SRA reads, 7 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 229 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:311021"
                     /db_xref="RGD:1311721"
     CDS             366..1301
                     /gene="Nmi"
                     /codon_start=1
                     /product="N-myc-interactor isoform X1"
                     /protein_id="XP_038960739.1"
                     /db_xref="GeneID:311021"
                     /db_xref="RGD:1311721"
                     /translation="MDNNVRQAYEECSPEKDIMRGEQSKGLLHEIMRENSKLDEEIKK
                     LEAELQSNAREFQIKENVPERKLKFTSVERPEDGDHFSNSSCSFQVNSQILYEVQRGQ
                     ALITFEKEEVAQNVISMGTHVVQMEGTSVKVSAHPVPLSTGVRFQVHVDISKMKINVT
                     GIPDELSEEQTRDKLELSFYKSKNGGGEVESVDYDRKSRSAVITFVVAGVADKILKKK
                     TYPLYMNQKWYNVTVSPFIERRLEKYQVFSAVSKKTVLLTGLDGIRVDEETGEDLLNI
                     HFQRKNNGGGEVEVVKCSLDQSFIACFEEEARGTT"
ORIGIN      
        1 tcctggtctg tcttgtgctg gtgtcaaact ttgtaaccgt ctagcaaatt acagagggaa
       61 tttgcgtaga gagccctggt ttccatacag tttttttcaa cagcgcgttc cgcagaatgc
      121 acacaaataa gcttttcaaa gcaggtcttg gaattactgc cagtatagaa acagcagcaa
      181 tggcgcccgg gacgaggtcc gcagggcaag gagcagaagc atcctgtttc tgaaataaac
      241 gaaagtgaaa gaacggcctg tgactgagcc tgctcattgc agaggccagg tttgtgtttc
      301 cgaggtgggg ttcggttcta ccggcgctgc cggcttccga gcgctgcgcg gcagagaggg
      361 gcgtcatgga taacaacgta aggcaagctt atgaagagtg ctcaccagag aaggacatca
      421 tgagaggcga acaaagcaag ggattacttc atgaaattat gagggaaaac agcaagctag
      481 acgaggagat caaaaaactt gaagctgaat tgcagtcgaa tgccagagaa ttccaaatta
      541 aagagaatgt accagaaaga aagcttaaat tcacctctgt ggagagaccc gaggatggag
      601 accatttctc aaatagctcc tgttcatttc aagtgaactc gcaaattctt tatgaggtac
      661 agagaggaca agcgcttatc acctttgaga aggaagaagt tgcacagaac gtgatatcga
      721 tggggacgca tgtcgtgcag atggaaggca cctcggtgaa ggtctctgca cacccagtcc
      781 cactgagcac aggtgtcaga tttcaggttc atgtggacat ttctaaaatg aagatcaatg
      841 ttacggggat tcccgatgaa ctgtctgagg agcagacaag ggacaagctg gagctgagct
      901 tctataagtc caagaatggc ggcggagaag tggaaagtgt agactatgac aggaagtcca
      961 gaagcgctgt catcacattt gtggtagctg gagttgctga caagattttg aaaaagaaaa
     1021 cctatcctct ctacatgaat cagaagtggt ataacgtgac tgtttcccca tttatagaaa
     1081 gacgcttgga aaagtaccag gtgttttcag ctgtgtccaa gaagacagta cttctgactg
     1141 gattagacgg cattcgtgta gatgaggaga ctggggaaga cttactcaac atccacttcc
     1201 aacggaagaa taacggaggg ggagaagtgg aggtggtcaa gtgttctcta gatcagtcct
     1261 tcatagcatg tttcgaagaa gaggccagag gaaccacatg aaacttacag ctctgagccc
     1321 aaatcattgt caacatttat gaaatattgt tttccttaac aatatttttc atttgccagt
     1381 gtcttcttat tctcggatgc aaaatctact cctaagcctt aaaattcttc tttgtttgct
     1441 ctactgtgga tttagaaaca ccagagtggc ctgcgtggga ggagtttgtt tcctaatctc
     1501 tatggctgaa ctctttgact ctcaggaaac actcagcggt gggtgccctt tgcccctgct
     1561 ctctgtctct gtcgtaatca tatgagccaa ttccattttg ggcccttgct cagaaatatg
     1621 tagatctgat gcataatgtc ttccaaaata aatccagttc aattta
//
