LOCUS       XM_039102293            1576 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus NMD3 ribosome export adaptor (Nmd3),
            transcript variant X2, mRNA.
ACCESSION   XM_039102293
VERSION     XM_039102293.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039102293.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1576
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1576
                     /gene="Nmd3"
                     /gene_synonym="RGD1308468"
                     /note="NMD3 ribosome export adaptor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     ESTs, 1 long SRA read, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 73 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:310512"
                     /db_xref="RGD:1308468"
     CDS             230..1381
                     /gene="Nmd3"
                     /gene_synonym="RGD1308468"
                     /codon_start=1
                     /product="60S ribosomal export protein NMD3 isoform X2"
                     /protein_id="XP_038958221.1"
                     /db_xref="GeneID:310512"
                     /db_xref="RGD:1308468"
                     /translation="MNGAILQQVFVVDYVVQSQMCGDCHRVEAKDFWKAVIQVRQKTL
                     HKKTFYYLEQLILKYGMHQNTLRIKEIHDGLDFYYSSKQHAQKMVEFLQGTVPCRYKS
                     SQRLISQDIHSNTYNYKSTFSVEIVPICKDNVVCLSPKLAQSLGNMNQICICIRVTSA
                     IHLIDPNTLQVADIDGNTFWSHPFNSLCHPKQLEEFIVIECSIVRDLKRNAGAGVISK
                     KHTLGEVWIQKTSEMDTDKQYFCRTHLGHLLNPGDLVLGFDLANCNLNDEHVNKMKSD
                     RVPDVVLIKKSYDRTKRQRRRNWKLKELARDREDMDTDDERQYQDFLEDLEEDETIRK
                     NVNIYRDSTVPVESDTDDEGAPRISLAEMLEDLRISQDATGEEGASMMS"
ORIGIN      
        1 agatctccct ggtggtggtg tggcgctgtg ggaactgaag gtgcgtcccg gccagcaggt
       61 tgccggctgt tcgtgtcttt tgccctgtca cgccccgaac catggagtac atgacagaat
      121 ctgttgaccg cagcccggga cacatgttcg gcttgttgac gcaggctttg tttggactga
      181 gcctcattcc aagagactta aagttaaatt gacaattcag aaagaggtga tgaatggtgc
      241 tatcctgcag caagtgtttg tggtggatta tgttgttcag tcccaaatgt gtggagactg
      301 ccatagagta gaagctaagg atttctggaa ggctgtgatc caagtcaggc agaagactct
      361 gcacaagaaa acattctact atctggaaca gttaattctg aaatatggaa tgcatcagaa
      421 tactctgcgt atcaaggaga ttcatgatgg tctggatttt tattattctt caaaacagca
      481 tgctcagaag atggtggagt ttcttcaggg tacagttccc tgtagataca aatcatcaca
      541 aagattgatc tcccaggata ttcatagtaa cacatacaat tacaagagta ctttttctgt
      601 ggaaattgtt ccaatatgca aggataatgt tgtctgtctg tcaccaaaac tggcacagag
      661 ccttggaaat atgaaccaga tatgtatttg tatacgagta actagtgcca tccatctcat
      721 agacccaaat accttacaag ttgcagacat tgatgggaac accttctgga gtcatccttt
      781 caatagttta tgccatccta aacagctaga agaatttatt gtgatagaat gcagcatagt
      841 ccgagatctg aagcgaaacg cgggggctgg agtgatatca aagaagcaca cccttgggga
      901 agtctggatc cagaagacat ctgaaatgga tacagataaa cagtattttt gccggactca
      961 cttgggacat cttttaaatc ctggagacct ggtgttggga tttgatttgg ccaactgtaa
     1021 cttaaatgat gagcatgtca acaaaatgaa atcagataga gttccagatg tggtcttgat
     1081 taagaagagc tatgaccgta ccaaacgcca gcgccgtaga aactggaaac tgaaagagct
     1141 tgcaagagac agagaagaca tggacacaga tgatgaaagg caatatcaag attttcttga
     1201 agatcttgaa gaagatgaga caattagaaa aaatgtcaac atttacagag attcaaccgt
     1261 ccctgtggaa agtgacacag atgatgaagg agcgcctcga attagtctgg ctgagatgct
     1321 tgaagacctt cgtatttctc aagatgctac tggtgaagaa ggtgcatcaa tgatgtcatg
     1381 atgagtcata tgctgtttgc atatctgtga acttaggaag ttggcaaaat aatcttgatt
     1441 gtatagtaca tgtattccct tatattttgg ggtttttttg tttgtttttt tccggagctg
     1501 aggactccct tatattttga aaggagcaat tttaccttaa acttgaataa attactattt
     1561 tgattgttca cttaaa
//
