LOCUS       XM_039101128            4458 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus NLR family, pyrin domain containing 14
            (Nlrp14), mRNA.
ACCESSION   XM_039101128
VERSION     XM_039101128.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4458
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4458
                     /gene="Nlrp14"
                     /note="NLR family, pyrin domain containing 14; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins, and 97% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:499234"
                     /db_xref="RGD:1598218"
     CDS             1247..4270
                     /gene="Nlrp14"
                     /codon_start=1
                     /product="NACHT, LRR and PYD domains-containing protein
                     14"
                     /protein_id="XP_038957056.1"
                     /db_xref="GeneID:499234"
                     /db_xref="RGD:1598218"
                     /translation="MILLEPISGPTKTMKTEDEEMEDQLSKEEIVSEDKEFDYGIDYR
                     TIIKENFFIIWDKTSLLGESATLNCVTTHKDQKLLEHIFDVNIQTSKSPQTVVLYGAA
                     GIGKTTLLKKAVLEWADGNLYQQFTHVFYLSGREISQEKEKNFAQLISKHWPSSEGPI
                     EQILCKPSSLLFILDSFDELDFSFEEPEFALCRDWTQKHPVSFLISSLLRKVMLPESY
                     LLVTTRTTAWKRLVPLLQKPHRVKLPGLSRSSRIDYIHHLLKDKTWAMNAVCSIRMNA
                     KLFNMCHVCHVCQMICTFLKEQVEKGGNVEMTCQTSTALFTYYICSLFPRIAGSSVTL
                     PNETLLRSLCQAAVEGIWTMKHVLYQQNLRKHELTREDLSLFLEANVLQQDTECENCY
                     TFTHLQVQEYFAALFYLLRENPEEKDHPLEPFENVHLLLESNHFHDPHLEQMKCFLFG
                     LLNKDRVQQLEETFNLTISRAVREELLVCLEALEKDDSPLSQLRIQDLLHCIYETQDE
                     EFITQALTYFQKIMVKVDEESKLLIYSYCLKHCHSLQTVRLTARADLRNMLDPTAEIC
                     LEDAAVRIIHYWQDLFSVLHTNESLLEMDLYESRLDESLMKILNEEFSHPKCNLQKVM
                     FRAVCFLNSCYDFSFLAFNNTVTHLDLKDTDLGDNGVKTLCEALKYQGCKLRVLRLES
                     CDLNVTHCQNLSKALQSNRSLVFLNLSTNSLSNDGVKSLCEVLENPNCPLERLALASC
                     GLTKVGCEVLSSALTKTKRLTHLCLAHNVLEDEGIELLSYTLRHPRCTLQSLVLRCCY
                     FTPIGSEHLSTALQNNKSLIHLDLGFNKLADSGVKLLCQTLQQPNCNLQELELMGCVL
                     TSEACGDLASVLVNNSNLWNLDLGNNILDDAGLNILCEALRNPNCQIRRLGLENCGLT
                     PGCCQDLLDLLSNNQSVIQMNLMKNSLDYEAIRNLCKVLRSPTCKMEFLALDKKDLFK
                     KKIKKFLVDVRINNPHLVIRPQCPNTESGCWWQYF"
ORIGIN      
        1 aacatgtgtt caggcactta cagcttttaa ggtctccatt gagaagtcag gcctgccttt
       61 atgttacttg gtctttttcc cttaaagttt ttaatatcct ttattctgta cacttaacat
      121 tttaatgtgc tgagtggtct ttttatagtg tcctatatgc ttcttgtatt ttgatagaat
      181 attagtaaat ttttattcta taggatttga ctttttaaaa ttttctgtgt ctttgacttg
      241 ggttccttct ccttctattt ctattatcct tagacttggt gttttcacag tgtccaagag
      301 ttcaggatag cataccagaa ttttttagat ttagcatttc ctttgaccaa actattcatt
      361 tcttctgtca tgtcttgaat gcctgagtat gtcttccaac tcttattctg ttggtgaggc
      421 tttcctctaa tgtctctgtt ttaagttcct aaatttttca cttccaggtt tccctcagtt
      481 tgaattttct ttgattctat ttcacaaggt ggttttgtgc ctgctgttag agcataaaga
      541 aggcaaaagt tcaacctagt gtttgtagca cattcttcct cagctaacct ggtgcagaat
      601 ttgaagctct tggctctagt ttaactaaac gcagatgttc agaattggtt ctagtgcttt
      661 gtcttaattt cttaccaaaa gcagtggttc caaacactga aggtccactg cccacagtgg
      721 acttcaattg atgataaaga atggctgtac aataattctg ggctgggcag gaagatagac
      781 gtgggatgtt tagattccgt agtcaaggga cagagagaga aaggaagagg aagtgacagg
      841 ggaacaagga gaatagacaa catataaggt tctgggaaag tggccctggg gaccattcct
      901 ccattgggtc tggggtagca gagatgaact atagatttta agatgttaac tcgggaatac
      961 tggaggggat tgtgtgctat ccagggaagt ttagaagttg ccagccatcg agttaatcaa
     1021 gtcatatcaa agtgtaagag tgtgagtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
     1081 tgtgtgtgtc cttcattcat aaatccagag ctcttgggtg aatgcaacca gccaggagcc
     1141 aaagcaattt acctatttca ccactacacc cagatagtca tagaatcaca acacagcaca
     1201 attctccatt ctaaccattc ctaaagctcc atttctggta aatctcatga tcctcttgga
     1261 acctatttca ggaccaacaa agaccatgaa gacagaggat gaggagatgg aagaccaact
     1321 ttctaaagag gaaatagtgt ctgaggataa agaatttgat tatggaatag actacagaac
     1381 tataataaag gaaaattttt ttattatatg ggataagact tctttgcttg gagaatctgc
     1441 aactttaaat tgtgtaacta ctcacaaaga ccaaaagctg ttggagcata tatttgatgt
     1501 gaatatccaa acttccaagt ctccacaaac ggtagtcctt tatggagctg ctggaattgg
     1561 gaagacaacg ttgttgaaaa aggcagtctt agaatgggca gatggcaatc tctatcagca
     1621 gtttacccat gttttttatc tcagtgggag agaaattagc caagagaagg agaaaaactt
     1681 tgctcagcta atatcaaagc actggcctag tagcgagggc cccattgaac agatcctgtg
     1741 caaacccagc agtctccttt ttatacttga tagttttgat gagctggatt tctcctttga
     1801 agagccagag ttcgcactgt gtagagattg gacccagaag cacccagtgt cttttctcat
     1861 tagtagtttg ctgaggaaag tgatgcttcc tgagtcctac ttattagtaa caacaagaac
     1921 aacagcctgg aaacgactag tgcctttgtt gcagaaacct catcgcgtaa agctaccagg
     1981 actgtctagg agttcaagga ttgactatat tcatcacttg ttaaaagata agacatgggc
     2041 tatgaatgca gtttgttcaa taagaatgaa tgcaaagctt ttcaacatgt gccatgtatg
     2101 ccatgtgtgc cagatgatct gtactttcct gaaggagcaa gtggagaaag gtggcaatgt
     2161 tgaaatgacc tgccagacca gtacagctct gttcacatat tatatctgca gcttatttcc
     2221 acgcatagct gggagctctg ttactctgcc caatgaaaca ctactaagga gcctatgcca
     2281 ggccgctgtt gaaggcattt ggactatgaa gcatgtgctc taccagcaaa atctccgaaa
     2341 gcatgagcta accagagagg acctctcact tttcctagag gcaaatgttc ttcagcagga
     2401 cactgagtgt gaaaactgct acacattcac tcacctccaa gttcaggagt attttgcagc
     2461 tctgttttac ttgctgagag agaatccaga agaaaaagac catcccttag aacctttcga
     2521 aaacgtgcat ctgttgcttg aaagcaacca ttttcatgac cctcatttgg aacagatgaa
     2581 atgctttttg tttggtctac tgaataaaga cagagtacaa caactggagg aaactttcaa
     2641 ccttacaata tccagggcgg taagggaaga gttacttgtg tgtctggaag cactagaaaa
     2701 ggatgactct cctctatcac agctgagaat tcaagacttg cttcactgta tatatgaaac
     2761 tcaagatgaa gaattcatca ctcaggcact gacgtatttt caaaagatta tggtaaaggt
     2821 tgatgaagaa tccaaattgc tcatatattc atactgtctt aagcactgcc actctctaca
     2881 gactgtgaga ctgacagcaa gggcagactt gagaaatatg ttggacccca cagctgaaat
     2941 ttgccttgag gatgctgctg ttagaatcat ccactactgg caagatctgt tttctgtgct
     3001 tcatacaaat gaatccctgt tagaaatgga tctgtatgaa agcagacttg atgaatcatt
     3061 gatgaaaatt ttgaatgaag aattcagtca cccaaagtgt aacctacaaa aagtaatgtt
     3121 cagagctgtc tgtttcctga atagctgtta cgattttagt ttcctggctt tcaacaacac
     3181 cgtgacacat cttgacctga aagatactga cttaggagac aatggagtaa agaccttatg
     3241 tgaagccttg aagtatcaag gatgtaaatt acgggtgctg aggttggaat cctgcgacct
     3301 gaatgtaacc cattgtcaaa atctatccaa ggctctccag agtaacagga gcctggtatt
     3361 tctgaatctg tccaccaaca gtctatcaaa tgatggagta aagtcgttgt gtgaggtctt
     3421 agaaaatcca aactgtcctc tagagagact agcgttagca agctgtggcc tcacaaaagt
     3481 tggttgtgaa gttctttcct cggctctcac caaaactaag aggttgacac atttatgctt
     3541 ggcacacaac gtcttggaag atgaagggat agagctgctc agctatacct tgaggcatcc
     3601 acggtgtact ctacaaagcc ttgtgcttag gtgctgctat ttcactccga ttggcagtga
     3661 gcatctctcc actgctcttc agaacaacaa gagcttgatc catctggacc tgggatttaa
     3721 caagctggcg gatagtggag taaagcttct gtgtcaaacc cttcagcagc caaactgcaa
     3781 ccttcaggag ttggagttga tgggctgtgt tctcacgagt gaggcttgtg gggatctggc
     3841 ttctgttctt gtgaacaact caaacttgtg gaacctagat cttgggaaca acatcttgga
     3901 tgatgctggt ctgaatattc tgtgtgaggc tttaaggaat ccaaactgcc aaattcggag
     3961 gctaggattg gaaaactgtg gtttaacccc tggttgctgt caggatctct tagatctctt
     4021 atctaacaac caaagtgtga tacaaatgaa cttaatgaag aattcccttg attatgaagc
     4081 aattaggaat ttatgtaaag tcttgaggtc tccaacatgc aaaatggaat ttctagcgtt
     4141 ggacaaaaag gatttattca agaagaaaat caagaaattt ctagtcgatg taagaattaa
     4201 taatccacat ttggtcatta ggccacagtg tcctaataca gaaagtgggt gctggtggca
     4261 gtatttctga agaacgtgat gtgcctttaa aaactttaaa aacctatctt tcaagtggca
     4321 gtctttaact tgtgagaaat actgtttata tcaagaagca ctgaactgca ttccagtagg
     4381 gatagagtac acacgtctct gtaaaatgtt tgttgggttt cacacagagg ttgagaaagt
     4441 aaagcaaaac acataaaa
//
