LOCUS       NM_001107518            2860 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus NIPA magnesium transporter 2 (Nipa2), mRNA.
ACCESSION   NM_001107518 XM_001054428 XM_218718
VERSION     NM_001107518.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2860)
  AUTHORS   Goytain A, Hines RM and Quamme GA.
  TITLE     Functional characterization of NIPA2, a selective Mg2+ transporter
  JOURNAL   Am J Physiol Cell Physiol 295 (4), C944-C953 (2008)
   PUBMED   18667602
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474036.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001054428.1, XM_218718.3.
            
            ##Evidence-Data-START##
            CDS exon combination :: FQ222971.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMN16676788 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2860
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     gene            1..2860
                     /gene="Nipa2"
                     /gene_synonym="RGD1306051; SLC56A2"
                     /note="NIPA magnesium transporter 2"
                     /db_xref="GeneID:308667"
                     /db_xref="RGD:1306051"
     exon            1..272
                     /gene="Nipa2"
                     /gene_synonym="RGD1306051; SLC56A2"
                     /inference="alignment:Splign:2.1.0"
     exon            273..393
                     /gene="Nipa2"
                     /gene_synonym="RGD1306051; SLC56A2"
                     /inference="alignment:Splign:2.1.0"
     exon            394..622
                     /gene="Nipa2"
                     /gene_synonym="RGD1306051; SLC56A2"
                     /inference="alignment:Splign:2.1.0"
     CDS             484..1563
                     /gene="Nipa2"
                     /gene_synonym="RGD1306051; SLC56A2"
                     /note="non imprinted in Prader-Willi/Angelman syndrome 2
                     homolog; solute carrier family 56 member 2"
                     /codon_start=1
                     /product="magnesium transporter NIPA2"
                     /protein_id="NP_001100988.1"
                     /db_xref="GeneID:308667"
                     /db_xref="RGD:1306051"
                     /translation="MSLGRGKYDFYIGLGLAMTSSIFIGGSFILKKKGLLRLARKGSM
                     RAGQGGHAYLKEWLWWAGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSY
                     FLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATFVVI
                     VALIFIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGITIKELLAGKPVLQHPLA
                     WILLLSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPV
                     DDVIGTLSGFFTIIVGIFLLHAFKDVSFSLASLPVTFRKDEKAVNGNLSNMYEVLNNN
                     EEDLPCGIEHTGENISRRNGNLTSF"
     exon            623..679
                     /gene="Nipa2"
                     /gene_synonym="RGD1306051; SLC56A2"
                     /inference="alignment:Splign:2.1.0"
     exon            680..770
                     /gene="Nipa2"
                     /gene_synonym="RGD1306051; SLC56A2"
                     /inference="alignment:Splign:2.1.0"
     exon            771..931
                     /gene="Nipa2"
                     /gene_synonym="RGD1306051; SLC56A2"
                     /inference="alignment:Splign:2.1.0"
     exon            932..2860
                     /gene="Nipa2"
                     /gene_synonym="RGD1306051; SLC56A2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tctgcgtcca ggtttcccgg caggttcgcg gcggccccgc tggtgctggc cgcggtgcgg
       61 ccgaaggctg tccgaggtag gctcctctcg gctctcctat ggagaaggcg gcgctcactg
      121 cagtcccgga tgcacgaact tcccgcggga cgtcgccgga gacggtggct gtgtgcgcgc
      181 aggagcgagc tgcctgcgtg ggggtctgag cgggcactcg ggtcgcgtcc cggagggagc
      241 cgcgtcgccc gccggcctgc gacggcccta agggtggaac tactctgcca tggttaaata
      301 ctttaaatgg gaataaagga tagcatttcc aagaaaatga gaatgaataa atcatctctg
      361 ttttttaaaa gaaagaccat attaaactta catgtttgaa gactgcatca tcctgcctcc
      421 agtacaagca gtttctctgt tcggtgatca atgtcactca caggaactta agtaactaac
      481 gaaatgagcc tggggcgtgg aaaatatgac ttttatattg gtcttggatt ggctatgacc
      541 tccagcattt tcattggagg gagtttcatt ttgaaaaaaa aaggccttct gcgacttgcc
      601 agaaaaggct ccatgagagc aggtcaagga ggccatgcat atcttaagga atggttatgg
      661 tgggctggac tgctgtcaat gggagctggt gaagtggcca attttgctgc atatgcattt
      721 gctccggcca cactggtgac tccactaggt gcactcagcg tccttgtaag tgccattctg
      781 tcttcatact tcctaaatga aagacttaat cttcatggga aaattgggtg tttactaagt
      841 attctaggat ctacagttat ggtcattcat gctccaaagg aagaggagat tgagacctta
      901 aatgaaatgt cacataagtt aggtgaccca ggttttgtgg tctttgcaac atttgtggtc
      961 attgtggcct tgatattcat ctttgtggtg ggacctcgac atggacagac aaacattctt
     1021 gtgtatataa caatctgctc tgtgattgga gcattttcag tctcctgcgt gaagggtttg
     1081 ggtatcacta taaaagagtt gttggctgga aagcctgttc tgcagcaccc cctcgcctgg
     1141 attctgctgc ttagccttgt ggtctgtgtg agcacacaaa ttaattacct aaaccgggct
     1201 ctggacattt tcaacacttc cattgtgact ccaatatatt atgtgttctt tacaacttca
     1261 gttttgacgt gttcagctat tctttttaaa gaatggcaag atatgcctgt tgatgatgtc
     1321 attgggacct tgagtggctt cttcacaatc attgtgggga tatttttgtt gcatgccttt
     1381 aaagatgtca gttttagtct agcaagtctg cctgtaactt ttcgaaaaga tgaaaaggca
     1441 gtgaatggca atctttctaa tatgtatgaa gttcttaata ataatgaaga agacttacca
     1501 tgtgggattg aacacactgg tgaaaatatc tcccgtagaa atggaaatct gacatctttt
     1561 taaggatatg tttgaaaagt taacctataa ttctgttata aaagtgattt ttgagtgtca
     1621 gaatgttatc tgaaaaaaat tgtcctcaaa taatgtcctc taaagacaat ctttttttta
     1681 agttttcact aatttggatc aagaaattac ttttcttata tttaaacaat ggtagctcac
     1741 taaaatgacc tcagtacatg gctaatttct aataacatat tattgtaaag gtattttaca
     1801 tttttattca tactccagaa atctaaatgc actaatgata aattttaagc ctataaaaat
     1861 gttttatttt ttccatcggt gatgaacatt aaaatgtaca tttgtgatcc ccatttcatc
     1921 aatacctcat cacaccaagg cttcttgatt ataaagatat gtgtgtgatt ccaagaaaat
     1981 aagtctcagg tggtgatttg tcacccaaac acctggtttc tcacacacat ctgctggcct
     2041 ccttttggaa aaacccactg tgctatcagt cagtacttgc tgcttctata gtgactggat
     2101 ctgtgtcatc ttatgtgagc tcttggacct tttagtgtgt gtgtgttcag aatggattac
     2161 attgtcattc agcccttaac aactctggga tgtcaacaga gacttgtggt ttcttaaatt
     2221 tagaaactca tgcttgcata aaatgacaag ttggaacaaa gttctttctg aatattctga
     2281 ttccaaatgc ttagatttaa aatatttgta gaatacatct ctttgaacca agtggtttat
     2341 tttgcttcag agtttgaact tttttttttt ttttttttag aaactgtgaa aaaaatgttt
     2401 atagaaaaat gcaaataggt acaaaaaggt taggccaatg taaggaacac tctccagctt
     2461 cagacctgcc cacttcaaag tcatgtatta gcttaaaaaa attcaccctc ttccatgcta
     2521 cccccattaa caggaagaac tgaggtttgg gcctgtgcct gtttcctgtt tcctccctac
     2581 agttatatag tgacttagct tttgtgaaga attttatttt ggagtggggg ttagctttgt
     2641 tctactattg gcactcttaa ggatacttgc cttgtgggcc atactgggtg tagtcacagt
     2701 ccacaaatgt tgtaaaactg agctacattt ccagaattcc tatgtaactt aaataccaga
     2761 gagaacaggt ttcccctgca ccctcaccga tatactttgt ctattttatg tactgtatct
     2821 atgtcttatt ttgcacataa aaaatagcca atgttcattc
//
