LOCUS       XM_039103523            2645 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus NIM1 serine/threonine protein kinase
            (Nim1k), transcript variant X2, mRNA.
ACCESSION   XM_039103523
VERSION     XM_039103523.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103523.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2645
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2645
                     /gene="Nim1k"
                     /note="NIM1 serine/threonine protein kinase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 ESTs, 6 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     10 samples with support for all annotated introns"
                     /db_xref="GeneID:310376"
                     /db_xref="RGD:1308116"
     CDS             1208..2518
                     /gene="Nim1k"
                     /codon_start=1
                     /product="serine/threonine-protein kinase NIM1"
                     /protein_id="XP_038959451.1"
                     /db_xref="GeneID:310376"
                     /db_xref="RGD:1308116"
                     /translation="MTAVVVNGGGLVNTHCDRWDRRDSAEGSCQTEGSKDGEEDQPRQ
                     LTPFEKLTQDMCQDEKVVREITLGKRIGFYRIRGEIGSGNFSQVKLGIHSLTKEKVAI
                     KILDKTKLDQKTQRLLSREISSMEKLHHPNIVRLYEVVETLSKLHLVMEYAGGGELFG
                     KISTEGKLSEPESKLIFSQIVSAVKHMHENQIIHRDLKAENVFYTSSTCVKVGDFGFS
                     TVSKKGEMLNTFCGSPPYAAPELFRDEHYVGVYVDIWALGVLLYFMVTGTMPFRAETV
                     AKLKKSILEGAYSIPQHVSEPCHRLIRGVLQPTPAERYGINYIMSNEWMRGVPYPSPL
                     EPFQLDPKHLSETSTLKEEENEVKSTLEHLGITDEHIRNNQGRDARSSITGVYRIILH
                     RVQRRKALESVPMATLPEPKDKDLKKGSRVYRGIRHTSKFCSIL"
ORIGIN      
        1 ttaggacgct gcgaggcact cggctctggt ggcggagcca gaagcagaca ggcagcgggg
       61 tttgccacgg ccctgtgggt caggtctgct gcccacccca gttagcagag ccataggaac
      121 gacccagacg tctgcgcccc aagacactca cgagcctgtg ccagtgcctg ccactctgcg
      181 tgccttgcct ggccgcgcag cgagctcccc aggcggcctc cggaccgagc aattaaaacc
      241 caactaagac acactgtcga aattactgta gttcttgggc ttccggaagt ctaaataagg
      301 gaaacatggt cgcaaccctt aagaagtgta cgatctgatt ggagagccgg cctgacgtta
      361 tgagtcataa ttttacaagc agtgaaggga accatactcc tggcatcggg tgttagaagt
      421 acaaacgaga actctggttt gtgatgagtg ggaaagctcc cgaaaacggt aaaccggaaa
      481 tcagacccac agagccgacg gcagatgctg gccgaggatg agctgtcatc tgccaaattt
      541 tcaggacagc tcagggctta gaagagggct catctaaata aaggccggct aaagtgacat
      601 tgtggagact taatccttct ctggctgcct gtgtgaccaa aggctgattt acaagactct
      661 tcctttctgg agttcagatt cttaagtccc cggagtcttg cgacttgaca gcaagagaaa
      721 aaaaaaagcg aaaacgaaat gaaggtcagc gatgagcccc cactgcagcg actcgggggc
      781 cgccaacggg cttttacact ctggagcgca agactgcctg gttacacagg gaattaacag
      841 agtggagctt ttgtccccct gtcgcagcca tctaccacag agcatcaggt tctatctcgg
      901 gaggagttgt ggtaactgaa tgcgcatctg ggttgtacag ctagagctcg gaaatccgaa
      961 gtgagggaaa agtgggaagg gcctgaagtg aggccccgct gggctgtgtg gactccatcg
     1021 ggtcactggg tgtccacaag ggttttttgc tcagctctcc ccgctctcat ggacactgtg
     1081 actcacatgg acactgctct cccggggccc tcaactcaag cctgcttcac tggccacccc
     1141 tgcctgtcct gcaaactgcc ctgacagtgg ctgtgggctg agatggagcc atgagcctgc
     1201 atagacgatg actgcagtgg ttgtgaatgg aggcggcctg gtgaacacac attgtgacag
     1261 gtgggaccgt agagacagtg cggaaggcag ctgtcagacc gagggcagca aggacggcga
     1321 ggaggaccag ccgcgccagc tgacaccttt cgagaaactg actcaggaca tgtgccaaga
     1381 tgagaaggtg gtgagggaga tcacgctggg gaaacgcata ggcttctatc gaattcgagg
     1441 ggagatcgga agcggaaact tttcccaggt caagctggga attcactccc taaccaaaga
     1501 aaaggtggcc attaagattc tggacaaaac caagttagac cagaaaaccc aaaggctgtt
     1561 atccagagaa atttccagca tggaaaagtt gcaccatccc aacattgtcc gtctttatga
     1621 agtcgtggag accctgtcca agctccacct agtgatggag tatgcaggag gtggggagct
     1681 ctttgggaaa attagcaccg aggggaaact ttctgaaccg gaaagcaagc tcatcttctc
     1741 ccagatcgtg tctgccgtga agcacatgca tgaaaaccaa attatccaca gagatctgaa
     1801 agcagaaaac gtcttctata ccagtagcac ttgtgtgaag gtgggggatt ttggattcag
     1861 caccgtaagt aagaaaggtg agatgctgaa caccttctgt gggtctccgc cctacgctgc
     1921 accggaactc ttccgtgacg agcactatgt tggcgtttat gtggatatct gggccttggg
     1981 tgtccttttg tacttcatgg tgactggtac gatgccattt cgagcagaaa ccgtggccaa
     2041 actgaaaaag agcatcctcg agggtgccta cagcataccc caacacgtgt cagagccctg
     2101 ccaccggctc atccgaggag tccttcagcc cacgcccgca gagaggtatg ggatcaacta
     2161 catcatgagc aacgaatgga tgcgaggggt gccgtacccc tcccctctgg aacctttcca
     2221 actggatcct aaacatttgt cggaaactag caccctcaaa gaagaagaaa acgaggtgaa
     2281 aagcacttta gagcacttgg ggatcacaga cgaacatatc cggaataacc aagggagaga
     2341 cgctcgaagc tctatcacgg gggtctatag aatcatttta catcgagtgc aaagaagaaa
     2401 agcactggaa agtgtgccaa tggcgacact accagaacct aaagacaagg acctaaagaa
     2461 agggtcccgt gtctacagag gcataagaca cacatctaaa ttttgttcaa ttttataaat
     2521 tatatcaggc agctgggagc taaccatgag cacagtttct gcttttaact tttctcgtac
     2581 acaatttgaa tggaaacact tttgtaattt ttaaataaat ttgagatatg tataccatcc
     2641 cccta
//
