LOCUS       NM_001100908            2399 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus niban apoptosis regulator 3 (Niban3), mRNA.
ACCESSION   NM_001100908 XM_001069426 XM_573881
VERSION     NM_001100908.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2399)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2399)
  AUTHORS   Bonaldo MF, Lennon G and Soares MB.
  TITLE     Normalization and subtraction: two approaches to facilitate gene
            discovery
  JOURNAL   Genome Res 6 (9), 791-806 (1996)
   PUBMED   8889548
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC111077.1 and BQ211431.1.
            
            On or before Oct 11, 2009 this sequence version replaced
            XM_573881.2, XM_001069426.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC111077.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06680412, SAMN06680413
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2072              BC111077.1         1-2072
            2073-2399           BQ211431.1         1-327               c
FEATURES             Location/Qualifiers
     source          1..2399
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p14"
     gene            1..2399
                     /gene="Niban3"
                     /gene_synonym="Fam129c"
                     /note="niban apoptosis regulator 3"
                     /db_xref="GeneID:498604"
                     /db_xref="RGD:1566103"
     exon            1..57
                     /gene="Niban3"
                     /gene_synonym="Fam129c"
                     /inference="alignment:Splign:2.1.0"
     CDS             3..1778
                     /gene="Niban3"
                     /gene_synonym="Fam129c"
                     /note="B-cell novel protein 1; niban-like protein 2;
                     family with sequence similarity 129, member C"
                     /codon_start=1
                     /product="protein Niban 3"
                     /protein_id="NP_001094378.1"
                     /db_xref="GeneID:498604"
                     /db_xref="RGD:1566103"
                     /translation="MGAQPSCPLSKKQQQQLRGQVDGLLRTFLPCYRRQLATAVLRHI
                     SQELGPQEPAACQLSHTKKLPRVREHQGPLTLLQGQPPQWRPIFCVLRGDGHLEWFSH
                     KENYESGGCPLGSAALTGYTLLTSQREYLCLLDDLCPSSSGDLAQEEPLRVLEEPVSF
                     ALFLVHPFRAHLCFCAGSRGAQRAWRLGLQGAIRLRATVLQRSRAPAACAFLDAVQLY
                     RRRRGYAGGDDAALGSDAEVLSAELMRELLPALRAQTLRGLRGVGRARARACAEFLDA
                     VHAAVLSWASSRLRAFQPEKDALLAALERMVRADLEQILQQRALGARRIEAEIQDTLE
                     TCLCQKVDPQLPQLTLVLVSLVEATLQAVRTLLIRGMDRLCHYLRKNPSGTQLRREVY
                     EFGEIPWDPELMQVCYREAERNHNHLTQLAKPFGFLGMRSLVFGAQDFAQQLMAAAVT
                     TFLQLADQCLTSALDCSQAAEQLEKVRGLVLKKFTSDSETTRWRFTRDWLLGIFWPFV
                     WGHLGMRCNLETPEADGDILAVGCQVLTTEGVYRDVIQGLLLQRIDRELEKVLGAGDR
                     ARAPADCSVAQWDQEGADEEAEAQI"
     exon            58..188
                     /gene="Niban3"
                     /gene_synonym="Fam129c"
                     /inference="alignment:Splign:2.1.0"
     exon            189..314
                     /gene="Niban3"
                     /gene_synonym="Fam129c"
                     /inference="alignment:Splign:2.1.0"
     exon            315..429
                     /gene="Niban3"
                     /gene_synonym="Fam129c"
                     /inference="alignment:Splign:2.1.0"
     exon            430..597
                     /gene="Niban3"
                     /gene_synonym="Fam129c"
                     /inference="alignment:Splign:2.1.0"
     exon            598..713
                     /gene="Niban3"
                     /gene_synonym="Fam129c"
                     /inference="alignment:Splign:2.1.0"
     exon            714..818
                     /gene="Niban3"
                     /gene_synonym="Fam129c"
                     /inference="alignment:Splign:2.1.0"
     exon            819..981
                     /gene="Niban3"
                     /gene_synonym="Fam129c"
                     /inference="alignment:Splign:2.1.0"
     exon            982..1172
                     /gene="Niban3"
                     /gene_synonym="Fam129c"
                     /inference="alignment:Splign:2.1.0"
     exon            1173..1331
                     /gene="Niban3"
                     /gene_synonym="Fam129c"
                     /inference="alignment:Splign:2.1.0"
     exon            1332..1448
                     /gene="Niban3"
                     /gene_synonym="Fam129c"
                     /inference="alignment:Splign:2.1.0"
     exon            1449..1556
                     /gene="Niban3"
                     /gene_synonym="Fam129c"
                     /inference="alignment:Splign:2.1.0"
     exon            1557..1668
                     /gene="Niban3"
                     /gene_synonym="Fam129c"
                     /inference="alignment:Splign:2.1.0"
     exon            1669..1752
                     /gene="Niban3"
                     /gene_synonym="Fam129c"
                     /inference="alignment:Splign:2.1.0"
     exon            1753..2385
                     /gene="Niban3"
                     /gene_synonym="Fam129c"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaatgggagc acagccttcc tgccccctga gcaagaaaca gcagcagcag cttcggggtc
       61 aggtggatgg cctgctgagg accttcctgc cctgctaccg caggcagctg gccacagctg
      121 tactcaggca catctcccag gagctggggc ctcaggagcc agccgcatgc cagctgtctc
      181 acaccaaaaa gctgcctcga gtcagggagc accaaggacc cttgaccctg ctgcagggcc
      241 agccgccaca atggcggccc atcttctgtg ttctgcgtgg agatggacat ctagaatggt
      301 tcagtcacaa ggagaactat gagtctgggg gctgtccgct aggctccgca gctctaaccg
      361 ggtatacact gctcacatcc cagcgtgaat acctctgcct tttggatgac ctctgcccca
      421 gctcctctgg agaccttgcc caggaggagc cgctgcgggt gttggaggag ccagtgagct
      481 tcgcgctctt cctcgtgcac cccttccggg ctcacctctg cttctgcgct ggctctagag
      541 gggcgcagcg cgcctggaga ctaggcctgc agggtgccat tcggttgaga gccaccgtcc
      601 tgcagcgcag ccgggcgccc gcagcctgcg ccttcctgga cgccgtgcag ctctatcgac
      661 gacgccgggg ctacgctggt ggagatgacg cggcactggg ctccgacgcg gaggtgctga
      721 gcgccgagtt gatgcgagag ctattgcccg cgctgcgagc acagacgctc cgaggcctgc
      781 gcggtgtggg acgcgccaga gcccgggcct gcgcagagtt cctcgacgcc gtgcacgcgg
      841 ccgtcctgtc ctgggcatcc tcgaggctgc gtgccttcca gccagaaaag gacgcactgc
      901 tggcggcgct ggagaggatg gtgcgcgcag accttgagca gatcctgcag cagcgtgcac
      961 tcggggcccg cagaatagaa gccgagatcc aggacacact agagacatgc ctgtgccaga
     1021 aggtggaccc gcaactgccc cagctgaccc tggtgctggt gagcctcgtg gaagccacgc
     1081 tccaagctgt tcggaccctt ctcatccggg ggatggaccg tctgtgtcac taccttcgca
     1141 agaacccttc tggcactcag ctgcgcaggg aggtttatga atttggggag ataccctggg
     1201 acccagagct gatgcaggtc tgctaccggg aggcagagag gaaccacaat catctgaccc
     1261 agctggcaaa accctttggc ttcctgggga tgcggagcct ggtgtttggg gctcaagact
     1321 ttgcacaaca gctcatggcg gctgcagtta ccacctttct acagctggcc gaccagtgtc
     1381 tgacgtcggc tctggattgc agccaggcag ctgagcagct ggagaaagtc aggggccttg
     1441 tgctgaagaa gttcacctca gacagtgaga ccactcggtg gaggttcacc cgggactggc
     1501 tgttggggat cttctggccc tttgtatggg gccatcttgg gatgagatgt aacttggaaa
     1561 cgcctgaggc agatggggac atcctggccg tgggctgcca ggttctgacc accgagggtg
     1621 tctacaggga tgtcatccag ggcctcttgc tgcagaggat tgacagagaa ttggaaaagg
     1681 ttcttggtgc cggtgacaga gcccgtgccc cagctgactg ctcagtagcc cagtgggacc
     1741 aggaaggagc agatgaggaa gctgaggctc agatctgaga gagactctgc aggccaaatg
     1801 cagccactct gtacaacatg gcttccaaga acattccaga gctgagtttt aatccatcaa
     1861 cacccatcct ggtggacaat ggatgaagac caggagtggc ttctctgggc caagcacatg
     1921 catgcttctc ttctggcagt catgtatcca acaacgaatc attgatggaa tattcctgct
     1981 aaaatttgta cactcgactt ctgagctagc ctgggctact gtaataagac actgtctcta
     2041 aataacaacc ccaaacccct gttaatatga tacatgtatc tctttaatgt cattttaatt
     2101 cttatttaat tttttcttaa aaatctgttt cttaaagttt cttttttaac tttgtttact
     2161 ttgtatgtgt gtgtacacac acatgcttgg gcctgtggag gtcagaggac agtttacagg
     2221 agttggattt tctctttcca tctagtgggt cttgaggctc aaactcaggt catcaagctt
     2281 ggcggcaagc acctttaccc gctaagtcat ctcgctggcc cctgttttta catttatcaa
     2341 tcgcttgatt aaaaactgct tgaatgacta aattgaactt taaaaaaaaa aaaaaaaaa
//
