LOCUS       NM_001107263            1202 bp    mRNA    linear   ROD 09-JAN-2024
DEFINITION  Rattus norvegicus neuroguidin (Ngdn), mRNA.
ACCESSION   NM_001107263 XM_001057531 XM_224181
VERSION     NM_001107263.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1202)
  AUTHORS   Swanger SA, He YA, Richter JD and Bassell GJ.
  TITLE     Dendritic GluN2A synthesis mediates activity-induced NMDA receptor
            insertion
  JOURNAL   J Neurosci 33 (20), 8898-8908 (2013)
   PUBMED   23678131
REFERENCE   2  (bases 1 to 1202)
  AUTHORS   Udagawa T, Swanger SA, Takeuchi K, Kim JH, Nalavadi V, Shin J,
            Lorenz LJ, Zukin RS, Bassell GJ and Richter JD.
  TITLE     Bidirectional control of mRNA translation and synaptic plasticity
            by the cytoplasmic polyadenylation complex
  JOURNAL   Mol Cell 47 (2), 253-266 (2012)
   PUBMED   22727665
  REMARK    GeneRIF: poly(A) polymerase Gld2, deadenylase PARN, and translation
            inhibitory factor neuroguidin (Ngd) are components of a dendritic
            CPEB-associated polyadenylation apparatus
REFERENCE   3  (bases 1 to 1202)
  AUTHORS   Baltz AG, Munschauer M, Schwanhausser B, Vasile A, Murakawa Y,
            Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E,
            Bonneau R, Selbach M, Dieterich C and Landthaler M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   4  (bases 1 to 1202)
  AUTHORS   Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein
            C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J and
            Hentze MW.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474049.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_224181.4, XM_001057531.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132263 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1202
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p13"
     gene            1..1202
                     /gene="Ngdn"
                     /gene_synonym="RGD1310211"
                     /note="neuroguidin"
                     /db_xref="GeneID:305887"
                     /db_xref="RGD:1310211"
     exon            1..63
                     /gene="Ngdn"
                     /gene_synonym="RGD1310211"
                     /inference="alignment:Splign:2.1.0"
     CDS             52..999
                     /gene="Ngdn"
                     /gene_synonym="RGD1310211"
                     /note="neuroguidin, EIF4E binding protein"
                     /codon_start=1
                     /product="neuroguidin"
                     /protein_id="NP_001100733.1"
                     /db_xref="GeneID:305887"
                     /db_xref="RGD:1310211"
                     /translation="MEAPEVLESEVSSSITLLKNLQEQVMAVTAQVQALTAKVRAGAY
                     STEKGLSLLEVKDQLLLMYLMDLSHLILDKASGGSLQGHPAVLRLVEIRTVLEKLRPL
                     DQKLKYQIDKLVKTAVTGSLSENDPLRFKPHPSNMMSKLSSEDEEENEAEEDQSEASG
                     KKSVKGASKKYVPPRLVPVHYDETEAEREQKRLEKAKRRALSSSVIRELKEQYSDAPE
                     EIRDVRHPHVTRQSQEDQHRINYEESMMVRLSVSKREKGLRRRASAMSSQLHSLTHFS
                     DISALTGGTAHLDEDQNPVKKRKKMPKKGRKKKGFRRRW"
     exon            64..123
                     /gene="Ngdn"
                     /gene_synonym="RGD1310211"
                     /inference="alignment:Splign:2.1.0"
     exon            124..195
                     /gene="Ngdn"
                     /gene_synonym="RGD1310211"
                     /inference="alignment:Splign:2.1.0"
     exon            196..333
                     /gene="Ngdn"
                     /gene_synonym="RGD1310211"
                     /inference="alignment:Splign:2.1.0"
     exon            334..418
                     /gene="Ngdn"
                     /gene_synonym="RGD1310211"
                     /inference="alignment:Splign:2.1.0"
     exon            419..471
                     /gene="Ngdn"
                     /gene_synonym="RGD1310211"
                     /inference="alignment:Splign:2.1.0"
     exon            472..595
                     /gene="Ngdn"
                     /gene_synonym="RGD1310211"
                     /inference="alignment:Splign:2.1.0"
     exon            596..764
                     /gene="Ngdn"
                     /gene_synonym="RGD1310211"
                     /inference="alignment:Splign:2.1.0"
     exon            765..921
                     /gene="Ngdn"
                     /gene_synonym="RGD1310211"
                     /inference="alignment:Splign:2.1.0"
     exon            922..979
                     /gene="Ngdn"
                     /gene_synonym="RGD1310211"
                     /inference="alignment:Splign:2.1.0"
     exon            980..1202
                     /gene="Ngdn"
                     /gene_synonym="RGD1310211"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcaggttagc tcccaggaag ttcgggcccg gaaagggtgg gctttgcgaa gatggaggct
       61 ccggaggtgc tggaatcaga ggtgtcaagt tcgataacac ttttgaaaaa tctccaggag
      121 caggtgatgg ctgtgacagc acaagtacaa gcactgacag caaaagttcg agctggagca
      181 tattctacag agaagggtct gagcctcttg gaagtgaaag accagctgtt gctcatgtac
      241 ctcatggacc tgagccacct catcctggac aaggcctctg ggggctctct gcagggacac
      301 cctgcagttc tgaggctggt ggagattcgc acggttttag aaaaactccg tcctttggac
      361 cagaagctga aatatcaaat tgacaaactg gtcaagactg cagtgacagg cagcctcagt
      421 gagaatgacc cgcttcgttt taagcctcac cccagcaata tgatgagcaa gttgagctct
      481 gaggatgagg aggaaaatga agcagaggag gaccagtctg aggcctcggg gaagaaatct
      541 gtaaaaggcg catctaagaa atacgtccca ccacgcttgg ttccggtaca ttatgatgag
      601 acagaagctg agcgggaaca gaagcgtctg gagaaagcca agagacgggc gctgagcagc
      661 tccgtcatcc gtgagctgaa ggagcagtac tcagatgccc cggaagagat ccgtgacgtg
      721 cgacaccctc acgtcacccg ccagagtcag gaggatcagc acaggatcaa ctatgaagag
      781 agcatgatgg ttcgcttaag tgtcagcaag cgagagaaag gactgcgaag gcgggcgagt
      841 gccatgagct cacagcttca ttccctcaca cacttcagcg acatcagcgc tttgacaggg
      901 ggcaccgctc atcttgatga ggaccagaat cctgttaaaa agcggaagaa gatgcctaag
      961 aaaggtcgga agaagaaagg ttttcggagg cgctggtgac gagcttatgc atgcactttt
     1021 ggtcatcact gtgtgtagac gtttgccttg gaaatgtgga aagagcttta ctaaataaaa
     1081 ttgattttgt ttatgataaa agacattttt gccatacatt gtatgattgc aattgctggg
     1141 catgggggct gcattcacta aaaggagagt tagtggaaag gggaagacga tgttttggga
     1201 ga
//
