LOCUS       XM_006235451            2021 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus NFS1 cysteine desulfurase (Nfs1),
            transcript variant X1, mRNA.
ACCESSION   XM_006235451
VERSION     XM_006235451.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006235451.4.
            
            On Jan 21, 2021 this sequence version replaced XM_006235451.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2021
                     /gene="Nfs1"
                     /gene_synonym="Nifs"
                     /note="NFS1 cysteine desulfurase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 47
                     ESTs, 3 long SRA reads, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 194
                     samples with support for all annotated introns"
                     /db_xref="GeneID:84594"
                     /db_xref="RGD:620912"
     CDS             31..1407
                     /gene="Nfs1"
                     /gene_synonym="Nifs"
                     /codon_start=1
                     /product="cysteine desulfurase isoform X1"
                     /protein_id="XP_006235513.1"
                     /db_xref="GeneID:84594"
                     /db_xref="RGD:620912"
                     /translation="MVGSVAGNMLLRAAWRRASLAATSVALRRSSVPTRGLRLRVVDH
                     APHSAVPSEAEAVLRPLYMDVQATTPLDPRVLDAMLPYLVNYYGNPHSRTHAYGWESE
                     AAMERARQVASLIGADPREIIFTSGATESNNIAIKGVARFYRSRKKHLVTTQTEHKCV
                     LDSCRSLEAEGFRVTYLPVQKSGIIDLKELEAAIQPDTSLVSVMTVNNEIGVKQPIAE
                     IGQICSSRKLYFHTDAAQAVGKIPLDVNDMKIDLMSISGHKLYGPKGVGAIYIRRRPR
                     VRVEALQSGGGQERGMRSGTVPTPLVVGLGAACELAQQEMEYDHKRISKLAERLIQKI
                     MKNLPDVVMNGDPKQHYPGCINLSFAYVEGESLLMALKDVALSSGSACTSASLEPSYV
                     LRAIGTDEDLAHSSIRFGIGRFTTEEEVDYTVQKCIHHVKRLREMSPLWEMVQDGIDL
                     KSIKWTQH"
ORIGIN      
        1 gcatgggctg aagacttgca agcgacgcag atggtgggct ctgttgctgg gaacatgctg
       61 ctgcgagccg cttggaggcg agcgtcgttg gcggctacct ctgtggccct gcgaaggtcc
      121 tcggtgccca cccggggact gcgcctgcgc gttgtagatc atgcccccca ttcggctgtt
      181 ccctccgagg cagaggcagt gctgcgacct ctctatatgg acgtgcaggc tacaactcct
      241 ctggacccca gggtgcttga tgccatgctc ccataccttg tcaactacta tgggaaccca
      301 cattctcgga ctcatgcgta tggctgggag agcgaggcag ccatggaacg tgctcgccag
      361 gtagcgtctc tgattggagc ggatcctcgg gagatcattt tcactagtgg agctacggaa
      421 tccaacaaca tagcaattaa gggagtggcc aggttctaca ggtcacggaa aaagcacttg
      481 gtcaccacgc agacagaaca caagtgcgtg ctggattcgt gccgctccct ggaagctgag
      541 ggctttcggg tcacttacct ccccgttcag aagagtggga tcattgactt aaaggaacta
      601 gaggctgcca tccagccaga taccagcctg gtctccgtta tgactgtaaa caatgagatt
      661 ggagtaaagc aaccgattgc agaaataggc cagatttgca gttccagaaa gctgtacttc
      721 catactgatg cagcccaagc tgttgggaaa atcccacttg atgtcaatga catgaaaatt
      781 gatctcatga gtatcagtgg tcacaaactc tacggcccta aaggggttgg tgctatctat
      841 atccgccgta ggccccgggt gcgtgtggag gccctacaaa gtggaggcgg gcaggagcgg
      901 ggtatgcggt ctgggacagt gcccacaccc ttggtggtgg gcctgggagc tgcatgtgag
      961 ctggcacaac aagagatgga gtacgaccat aaacggatct caaagttagc agagcgactc
     1021 atacagaaga taatgaagaa ccttccagat gtggtgatga acggggaccc gaagcagcac
     1081 taccctggct gtatcaacct ctcctttgcg tatgtggaag gggaaagcct gctgatggca
     1141 ctcaaggacg ttgccttgtc ctcggggagt gcctgcactt ccgcatcatt ggagccctcg
     1201 tatgtcctca gagccatcgg tacggatgag gatttagcac actcctctat caggttcggc
     1261 atcggccgct tcactacaga ggaggaggta gactacaccg tgcagaagtg catccaccat
     1321 gtgaaacgtc ttcgagaaat gagtcctctc tgggagatgg tgcaggatgg cattgacctc
     1381 aagagcatca agtggaccca gcattagaag agtggactgt gacttcgtgc tggcctggct
     1441 gctctggcct ctccgaccca tgcacagcca ggaacctcat tacatgctca agtcagattg
     1501 gaagttcttc agtggcttca ccacagaatg ttttcaagtg agaacttgaa gggaggatct
     1561 ttgctagcct cagctcctct gtagacacgt tccctattct cctcaggagc tcttctccgc
     1621 tgtctagtgt ggccattctt acctgaggac ctgtaggcac tgctgtgtta ctgccacggg
     1681 gactacctac ccgtgggcag atgaaggaac tagaagaagg ctctaggttc aaagactgct
     1741 tctctgtgaa tcttcactct tgctgctcag ctggactggc gccattaggg acaggcataa
     1801 acaatctttc ttttaacctt ttttgtggct tcaaaagaca tcttttatat caatagcaag
     1861 ttgtattaaa gtctcgtttc ctttggggtc tcagcttctt ttctgtattt tgatttaatg
     1921 tagaaatatc catgactcca cccattattc taataatttg cttagttcat taaactttgt
     1981 tgatttgaag attggagaaa taaattccat ttcccctctt a
//
