LOCUS       NM_199111               1669 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus NFKB inhibitor epsilon (Nfkbie), mRNA.
ACCESSION   NM_199111 XM_236939
VERSION     NM_199111.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1669)
  AUTHORS   Hayden MS and Ghosh S.
  TITLE     Shared principles in NF-kappaB signaling
  JOURNAL   Cell 132 (3), 344-362 (2008)
   PUBMED   18267068
  REMARK    Review article
REFERENCE   2  (bases 1 to 1669)
  AUTHORS   Shimazu D, Yamamoto N, Umino A, Ishii S, Sakurai S and Nishikawa T.
  TITLE     Inhibition of D-serine accumulation in the Xenopus oocyte by
            expression of the rat ortholog of human 3'-phosphoadenosine
            5'-phosphosulfate transporter gene isolated from the neocortex as
            D-serine modulator-1
  JOURNAL   J Neurochem 96 (1), 30-42 (2006)
   PUBMED   16277611
  REMARK    GeneRIF: D-serine modulator-1 is the rat orthologue of the human
            3'-phosphoadenosine 5'-phosphosulfate transporter 1 gene
REFERENCE   3  (bases 1 to 1669)
  AUTHORS   Ishida N and Kawakita M.
  TITLE     Molecular physiology and pathology of the nucleotide sugar
            transporter family (SLC35)
  JOURNAL   Pflugers Arch 447 (5), 768-775 (2004)
   PUBMED   12759756
  REMARK    Review article
REFERENCE   4  (bases 1 to 1669)
  AUTHORS   Kamiyama S, Suda T, Ueda R, Suzuki M, Okubo R, Kikuchi N, Chiba Y,
            Goto S, Toyoda H, Saigo K, Watanabe M, Narimatsu H, Jigami Y and
            Nishihara S.
  TITLE     Molecular cloning and identification of 3'-phosphoadenosine
            5'-phosphosulfate transporter
  JOURNAL   J Biol Chem 278 (28), 25958-25963 (2003)
   PUBMED   12716889
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC061795.1.
            
            On Jan 1, 2004 this sequence version replaced XM_236939.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC061795.1, EV764951.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16093046 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1669
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q12"
     gene            1..1669
                     /gene="Nfkbie"
                     /gene_synonym="Slc35b2"
                     /note="NFKB inhibitor epsilon"
                     /db_xref="GeneID:316241"
                     /db_xref="RGD:735070"
     exon            1..558
                     /gene="Nfkbie"
                     /gene_synonym="Slc35b2"
                     /inference="alignment:Splign:2.1.0"
     CDS             182..1279
                     /gene="Nfkbie"
                     /gene_synonym="Slc35b2"
                     /note="nuclear factor of kappa light polypeptide gene
                     enhancer in B-cells inhibitor, epsilon; solute carrier
                     family 35, member B2"
                     /codon_start=1
                     /product="NF-kappa-B inhibitor epsilon"
                     /protein_id="NP_954542.1"
                     /db_xref="GeneID:316241"
                     /db_xref="RGD:735070"
                     /translation="MSDARKGPDEADDSQCDSGIESLRSLRSLPDPAAAPVSGSSHSG
                     CPQPWSHAPKTDKEPEGKEDADGERADSTYASSSLTESLPLLERPEAKDPNPPTPSSP
                     VSPAGVLSPQQLEALTYISEDGDTLLHLAVIHEAPSVLFCCLAFLPQEVLDIQNNLYQ
                     TALHLAVHLDQPDVVRALVLKGASRILQDQHGDTALHVACQRQNLACACCLLEEQPEP
                     GRQPSHPLDLQLKNWQGLACLHIATLQRNQPLIELLLQNGADIDAQEGTSGKTALHLA
                     VETQERSLVQFLLQAGARVDARMLNGCTPLHLAAGRGLNSISSTLCEAGADSLLLNVE
                     DETPQDLAEDLLSYLPFDDLKISGKPLLCTD"
     exon            559..661
                     /gene="Nfkbie"
                     /gene_synonym="Slc35b2"
                     /inference="alignment:Splign:2.1.0"
     exon            662..884
                     /gene="Nfkbie"
                     /gene_synonym="Slc35b2"
                     /inference="alignment:Splign:2.1.0"
     exon            885..973
                     /gene="Nfkbie"
                     /gene_synonym="Slc35b2"
                     /inference="alignment:Splign:2.1.0"
     exon            974..1213
                     /gene="Nfkbie"
                     /gene_synonym="Slc35b2"
                     /inference="alignment:Splign:2.1.0"
     exon            1214..1605
                     /gene="Nfkbie"
                     /gene_synonym="Slc35b2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgccggcgcc ctggacctct cgcttttctc gtccgctccc cgcgcctgca cagccaggta
       61 atgaacccgc tcgcagaggg actctggttc tgttaggcgg acacacaaac ccggaaaagc
      121 gcgccgcaca cctcagagtt agatcccgct ggaccctgga tcccgggctg gcgcggccgg
      181 catgtcggat gcgcggaagg ggccggacga ggcggacgac agccagtgcg attccggcat
      241 agagtcgctg cgctctctgc gctccctgcc cgaccctgct gcggccccag tctctggatc
      301 atcgcacagc ggctgcccac agccttggag ccatgctccg aagacggaca aggaaccaga
      361 ggggaaggaa gatgcggatg gagagcgagc ggactccacc tatgcctcct cctctctcac
      421 agagtctttg cccttgctgg agagacccga ggccaaggat ccaaaccctc ccaccccaag
      481 ctcgccggtg tcccccgcgg gggtgctgag ccctcagcaa ctcgaagcgc tcacgtacat
      541 ctctgaagat ggagacacgc tgctccacct ggcagtaatc catgaagccc catcggtact
      601 attctgttgc ttggctttcc tgccccagga agtcctggat attcagaaca acctttacca
      661 gacagcgctg catctggccg ttcatctgga tcagccagat gtagtccggg ccctggtgct
      721 gaagggagcc agccgaatac tgcaggacca acacggcgac acagccctgc atgtagcctg
      781 tcagcgccag aatctggcct gtgcgtgctg cctgctggag gagcagccag agccgggcag
      841 acagccatct catcccctgg acctccaact gaagaactgg caaggtctgg cctgtctcca
      901 catcgccaca ttgcagagga accaaccact catagaactg ctgcttcaga atggagccga
      961 catcgatgca caggagggca ccagtggaaa gactgccctg cacctggctg tggaaaccca
     1021 ggagcgcagc ctggtgcagt tcctgctcca ggctggtgcc cgagtagatg cccgcatgct
     1081 gaatgggtgt acacctttgc acctggcagc tggccggggc ctcaacagca tctcgtccac
     1141 tctgtgtgag gccggtgccg actcactgct gctgaacgtg gaagatgaga caccccagga
     1201 cctggccgag gatctccttt cttacttgcc cttcgatgac ctgaaaatct ccgggaagcc
     1261 actgctatgt actgactgaa gcttggatgg gcccccacct cttccaattg gaagctggag
     1321 ccacagatgc tgccgttggg acccaagcag tgttgctcct ctgctgatgc cagagtctgg
     1381 ggctagcatc gtcctaaaat gagatgaagg attgcaaatg aggaagagcc gatctggaca
     1441 gaagaacttc ccaggtggac tggatggaga ttcttgaaag accctctaag ccgctggtgt
     1501 cctgagggaa gcctccttgc ttctgttgga gatggcgtgg gctgacatta ccagccacca
     1561 ggaaaacagg aatgagcgaa ctgacccctg agggtcttac ctaaaaaaaa aaaaaaaaaa
     1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//
