LOCUS       XM_039097726            1830 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus neuropilin and tolloid like 2 (Neto2),
            transcript variant X2, mRNA.
ACCESSION   XM_039097726
VERSION     XM_039097726.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039097726.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1830
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1830
                     /gene="Neto2"
                     /note="neuropilin and tolloid like 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     ESTs, 8 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 116
                     samples with support for all annotated introns"
                     /db_xref="GeneID:307757"
                     /db_xref="RGD:1305310"
     CDS             274..1830
                     /gene="Neto2"
                     /codon_start=1
                     /product="neuropilin and tolloid-like protein 2 isoform
                     X2"
                     /protein_id="XP_038953654.1"
                     /db_xref="GeneID:307757"
                     /db_xref="RGD:1305310"
                     /translation="MALEQLCAVLKVLLITVLVVEGIAVAQKTQDGQNIGIKHVPATQ
                     CGIWVRTSNGGHFASPNYPDSYPPNKECIYILEAAPRQRIELTFDERYYIEPSFECRF
                     DHLEVRDGPFGFSPLIDRYCGMKSPALIRSTGRFMWIKFSSDEELEGLGFRAKYSFIP
                     DPDFTYLGDCQFELSGADGIVRSSQVEQEEKTKPGQAVDCIWTIKATPKAKIYLRFLD
                     YQMEHSNECKRNFVAVYDGSSAIENLKAKFCSTVANDVMLKTGVGVIRMWADEGSRLS
                     RFRMLFTSFVEPPCTSSTFFCHSNMCINNSLVCNGVQNCAYPWDENHCKEKKKAGLFE
                     QITKTHGTIIGVTSGIVLVLLIISILVQVKQPRKKVMACKTAFNKTGFQEVFDPPHYE
                     LFSLREKEISADLADLSEELDNYQKLRRSSTASRCIHDHHCGSQASSVKQSRTNLSSM
                     ELPFRNDFAQPQPMKTFNSTFKKSSYTFKQTHDCPEQALEDRVMEEIPCEIYVRGRDD
                     SAQASISIDF"
ORIGIN      
        1 cacgcggcgc tgcgctcgct gcttaaatga gccggggctc ccggcgcgcg ccacttcaag
       61 ggagcccgcc gcaggagcgg ccaccgccgg ctttcctcag cgcgccggga ggcggcggcc
      121 gtcggggacc ggacgcggcg agctgaggcg ctgcgctcgc tgcaggggag cggcggcggc
      181 cggcgatggg gaccgaacgg agctaccgtg ccgggccgtg accgccgcgc cgccgccgcc
      241 tcgggcgctc tcggagcgcc gacgctgagg aacatggccc tggagcagct ctgcgcggtc
      301 ctcaaagtgt tgctaataac ggtactcgta gtggaaggga ttgctgtggc ccaaaagacc
      361 caagatggac aaaatattgg aatcaagcat gttcctgcaa cccagtgtgg catttgggtt
      421 cgaaccagca acggaggtca ttttgcttcc ccaaattatc ctgactccta tccgccaaac
      481 aaggagtgta tctatatttt ggaagctgct cctcgtcaac ggatagagct gacctttgat
      541 gaacgatatt atatagagcc atcatttgaa tgccggtttg atcacttgga agttcgagac
      601 gggccatttg gcttctctcc tcttatagat cgttactgtg gcatgaaaag ccctgcatta
      661 attaggtcaa caggaagatt catgtggatt aaatttagtt ctgatgaaga acttgaagga
      721 ctaggatttc gagcaaaata ctcattcatc ccagatccag actttactta ccttggagat
      781 tgccagtttg agctctcggg agctgatgga atagtgcggt ctagccaagt agaacaggag
      841 gaaaaaacaa agcccggcca agcggttgac tgcatatgga caattaaagc taccccgaaa
      901 gctaagattt acttgaggtt cttagattat caaatggaac actcaaatga atgcaaaaga
      961 aattttgtgg cagtctatga tgggagcagc gctatcgaaa atctgaaggc caagttctgc
     1021 agcaccgtgg ctaacgacgt aatgttgaaa acgggagtgg gggtgatccg gatgtgggca
     1081 gacgaaggca gtcggctgag caggttcagg atgctcttca cttcctttgt ggagcctccc
     1141 tgtacaagca gcactttctt ttgccatagc aacatgtgca tcaacaattc attagtctgt
     1201 aatggcgttc aaaactgtgc atacccttgg gatgagaacc actgtaaaga aaagaaaaaa
     1261 gccggactgt ttgaacaaat cacgaagact catgggacga tcattggtgt cacatcaggg
     1321 atcgtcctgg tccttctcat tatttctatt ttagtacaag tgaaacagcc ccggaaaaag
     1381 gtcatggctt gcaaaactgc atttaataaa actgggttcc aggaagtatt tgatcctcct
     1441 cattatgaac tattttcact aagagagaaa gagatttctg cagatctggc agatttgtca
     1501 gaagaacttg acaactacca gaagctgcga cgctcctcca cggcctctcg gtgcatccat
     1561 gaccaccact gtgggtctca agcatccagt gtcaaacaaa gcaggaccaa cctcagttcc
     1621 atggaacttc ccttccgaaa tgattttgca caaccacagc caatgaaaac atttaatagc
     1681 accttcaaaa aaagcagtta cactttcaaa caaacccatg actgccctga acaggctcta
     1741 gaggacagag tgatggagga gattccctgt gaaatctatg tcagagggcg agatgactct
     1801 gcacaagcgt ccatatccat cgacttttag
//
