LOCUS       NM_001107371            3524 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus neuropilin and tolloid like 1 (Neto1), mRNA.
ACCESSION   NM_001107371 XM_001062552 XM_225661
VERSION     NM_001107371.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3524)
  AUTHORS   Jack A, Hamad MIK, Gonda S, Gralla S, Pahl S, Hollmann M and Wahle
            P.
  TITLE     Development of Cortical Pyramidal Cell and Interneuronal Dendrites:
            a Role for Kainate Receptor Subunits and NETO1
  JOURNAL   Mol Neurobiol 56 (7), 4960-4979 (2019)
   PUBMED   30421168
  REMARK    GeneRIF: NETO1 and Gluk1 specifically promote dendritic growth of
            interneurons in the visual cortex.
REFERENCE   2  (bases 1 to 3524)
  AUTHORS   Fisher JL.
  TITLE     The auxiliary subunits Neto1 and Neto2 have distinct,
            subunit-dependent effects at recombinant GluK1- and
            GluK2-containing kainate receptors
  JOURNAL   Neuropharmacology 99, 471-480 (2015)
   PUBMED   26277340
REFERENCE   3  (bases 1 to 3524)
  AUTHORS   Tang M, Pelkey KA, Ng D, Ivakine E, McBain CJ, Salter MW and
            McInnes RR.
  TITLE     Neto1 is an auxiliary subunit of native synaptic kainate receptors
  JOURNAL   J Neurosci 31 (27), 10009-10018 (2011)
   PUBMED   21734292
REFERENCE   4  (bases 1 to 3524)
  AUTHORS   Ng D, Pitcher GM, Szilard RK, Sertie A, Kanisek M, Clapcote SJ,
            Lipina T, Kalia LV, Joo D, McKerlie C, Cortez M, Roder JC, Salter
            MW and McInnes RR.
  TITLE     Neto1 is a novel CUB-domain NMDA receptor-interacting protein
            required for synaptic plasticity and learning
  JOURNAL   PLoS Biol 7 (2), e41 (2009)
   PUBMED   19243221
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474021.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_225661.4, XM_001062552.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760393,
                              SAMEA5760396 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3524
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18q12.3"
     gene            1..3524
                     /gene="Neto1"
                     /gene_synonym="RGD1566269"
                     /note="neuropilin and tolloid like 1"
                     /db_xref="GeneID:307206"
                     /db_xref="RGD:1566269"
     exon            1..960
                     /gene="Neto1"
                     /gene_synonym="RGD1566269"
                     /inference="alignment:Splign:2.1.0"
     CDS             933..2534
                     /gene="Neto1"
                     /gene_synonym="RGD1566269"
                     /note="neuropilin and tolloid-like protein 1; neuropilin
                     (NRP) and tolloid (TLL)-like 1"
                     /codon_start=1
                     /product="neuropilin and tolloid-like protein 1 precursor"
                     /protein_id="NP_001100841.1"
                     /db_xref="GeneID:307206"
                     /db_xref="RGD:1566269"
                     /translation="MIYGRSLFHIIASLIILHSSGATKKGTEKQITPETQKSVQCGTW
                     TKHAEGGVFTSPNYPGKYPPDRECVYIIEAAPRQCIELYFDEKYSIEPSWECKFDHIE
                     VRDGPFGFSPIIGRFCGQQNPPVIKSSGRFLWIKFFADGELESMGFSARYNFTPDPDF
                     KDLGVLKPLPACEFEMGGPEGIVESIQILKEGKASASEAVDCKWYIRAPPRSKIYLRF
                     LDYEMQNSNECKRNFVAVYDGSSSVEDLKAKFCSTVANDVMLRTGLGVIRMWADEGSR
                     NSRFQMLFTSFQEPPCEGNTFFCHSNMCINNTLVCNGLQNCVYPWDENHCKEKRKTSL
                     LDQLTNTSGTVIGVTSCIVIILIIVSVIVQIKQPRKKYVQRKSDFDQTVFQEVFEPPH
                     YELCTLRGTGATADFADVAEDFENYHKLRRSSSKCIHDHHCGSQLSSAKGSRSNLSTR
                     DASILAEIPTQPVKPLIPPVNRRNILVMKHNYSQDAADACDIDEIEEVPTTSHRLSRH
                     EKSVQRFCLIGSLSKHESEYNTTRV"
     exon            961..1014
                     /gene="Neto1"
                     /gene_synonym="RGD1566269"
                     /inference="alignment:Splign:2.1.0"
     exon            1015..1152
                     /gene="Neto1"
                     /gene_synonym="RGD1566269"
                     /inference="alignment:Splign:2.1.0"
     exon            1153..1401
                     /gene="Neto1"
                     /gene_synonym="RGD1566269"
                     /inference="alignment:Splign:2.1.0"
     exon            1402..1443
                     /gene="Neto1"
                     /gene_synonym="RGD1566269"
                     /inference="alignment:Splign:2.1.0"
     exon            1444..1571
                     /gene="Neto1"
                     /gene_synonym="RGD1566269"
                     /inference="alignment:Splign:2.1.0"
     exon            1572..1800
                     /gene="Neto1"
                     /gene_synonym="RGD1566269"
                     /inference="alignment:Splign:2.1.0"
     exon            1801..1914
                     /gene="Neto1"
                     /gene_synonym="RGD1566269"
                     /inference="alignment:Splign:2.1.0"
     exon            1915..2473
                     /gene="Neto1"
                     /gene_synonym="RGD1566269"
                     /inference="alignment:Splign:2.1.0"
     exon            2474..2548
                     /gene="Neto1"
                     /gene_synonym="RGD1566269"
                     /inference="alignment:Splign:2.1.0"
     exon            2549..3524
                     /gene="Neto1"
                     /gene_synonym="RGD1566269"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgccgcccca ttccgccgct caccagccct gggggcaccg gctgtgctca gctgcccagt
       61 ctcacccagg cttcgagctt cctggagggt catgcaaccc gtagctatga ctaagacgct
      121 cacttggtaa ctctgccata ttccttatct ttcccttcct tccctcccct ccccctttaa
      181 acacccccgt gttcccctcc accacccttg agccctcccc cgcccccaga cgcccaccct
      241 tagactcctt ttcctgcaag atatcagagg tggcgcgcag cccgacgagc cgatgacgga
      301 cccctgcttc ctgccttcaa tgcctcagca gaagaccccc aaaagctgga gagaggaggg
      361 ctgcggctgg acatcctccg ggcgacgctg ctcggacccg gtgctagtgg tggatgagac
      421 cggtgactga acaagtccct gcctctgcct tcgctgccgc ctgcccagtc gttgccgtcg
      481 atcgggaccg gtccccacct tgcgccttct gcctctcacc ccagatcagg tccgggcttc
      541 gggcgccccg gggctcgccc ggcgcttgcc gccgcccgcg cgccgactgc ccgccgcgtc
      601 ctcctgacag ctgcggcggc ggtgatgcag aggaggaggg cgctgccggc ggcggtgctc
      661 atggtggcgg tcggcgtccg ggtgtgatga gagcgtcatg gtggagatgc tggcttcgag
      721 gcggtgagag agcaaacgag ggcgagagcc agccaagggc ggaagacaga ccagttctga
      781 tgctttcttt cctctgtcgc ttccccccac tgtatattac ccgtggtttg catatttgaa
      841 acctctggac tcaatccttt ccctaccatc gaagtctccc cgtttctaaa tggaattagt
      901 ggagatcgga gcctctggtg taacgcacag acatgatcta tggacgcagt ttgtttcaca
      961 ttatagcaag tttaatcatc ctccattctt ctggagcaac caagaaagga acagaaaaac
     1021 aaatcacccc agaaacacag aagtcagtgc agtgtggaac gtggacaaaa catgcagagg
     1081 ggggtgtctt tacctctccc aattatcctg gcaaatatcc cccagaccga gaatgtgtct
     1141 acatcataga agctgcccca aggcaatgca ttgaacttta ctttgatgaa aagtactcaa
     1201 tcgaaccatc ttgggagtgc aaatttgatc atattgaagt tcgagatgga ccctttggct
     1261 tctctccaat aattggaagg ttctgtggac aacagaatcc acctgttata aaatctagtg
     1321 gaagatttct gtggattaaa ttctttgctg atggggagct ggagtctatg ggattttcag
     1381 ctcgatataa tttcacacct gatcccgact ttaaggacct tggagttttg aaaccgttgc
     1441 cagcgtgtga gtttgagatg ggcggcccgg aaggaattgt ggagtccata cagattctga
     1501 aggaaggcaa agcttctgcc agtgaagccg tggattgcaa atggtacatc cgagccccac
     1561 cacgatccaa gatttattta cgtttcttgg actatgagat gcagaattca aatgagtgca
     1621 aaagaaactt tgtggcggtc tatgacggaa gcagctctgt ggaggacttg aaggccaagt
     1681 tctgcagcac ggtggctaat gacgtcatgc tgcgcacagg ccttggggtg atccgcatgt
     1741 gggcagacga gggcagccgc aacagcaggt ttcagatgct cttcacatct tttcaagaac
     1801 ctccctgtga aggcaacaca ttcttctgcc acagtaacat gtgtattaac aacacactag
     1861 tctgcaatgg gctccagaac tgtgtatatc cctgggatga aaatcactgt aaagaaaaga
     1921 ggaaaaccag cctgctggat cagctgacca acaccagtgg gacggtcatt ggcgtgactt
     1981 cctgcattgt gatcatcctt attatcgttt ctgtcattgt acagatcaaa cagcctcgta
     2041 aaaaatacgt ccaaaggaag tcagactttg accagaccgt tttccaggag gtgtttgagc
     2101 ctcctcacta tgagttatgc acgctcagag gaaccggagc aacagctgac tttgcagatg
     2161 tggcagaaga ctttgaaaat taccataaac tgcgaagatc atcttccaaa tgcatccatg
     2221 accatcactg tggatcacaa ctgtccagcg cgaaaggcag tcgcagtaac ctcagcacaa
     2281 gggacgcttc tatcttggca gagataccca cgcagccagt caagcccctc atcccacccg
     2341 tgaacagaag aaacatcctg gtcatgaaac acaactactc acaagatgcc gcagatgcct
     2401 gtgacattga cgagattgag gaggttccca ccacgagcca caggctatcc agacacgaaa
     2461 aatccgtcca gcggttctgc ctcattgggt ctctaagcaa acatgaatct gaatacaaca
     2521 caactagggt ctaacacgaa aatccaagag aagaactatt tacacaaaca tggggactgt
     2581 gaaaagaaag ttccgtagtg aattgtgaaa agtggacata tttctaaatt cattccactg
     2641 cctttattcc aaacgtaaga gttacagaca tgcgttattc cttcggcaag actccctgct
     2701 gccgcgcaat gatgtgtcca tttcctaatt cggttgctga tcaccaagtg ctccttaggt
     2761 tttcaataca ttctgagatt tacggaaact tgaagaagaa attagttcct gattgagact
     2821 accccagctt tacgtttatt gttggtttcg catttgttta tatggtgtct gtgtgtcttt
     2881 gttaaatgtt tgtacctgtg tgatctttgg gaaaaggaaa caaaactttg ggtgaactcc
     2941 gtgttatacg tccattgttt tcattgcata gactgcctga gaatagtccc tgtgtgattt
     3001 ttgagcaagc tgcagtgaaa aacgcaaatg tggatcatga aagcatcacc gagaggttct
     3061 atggactgtg cacacctgct gtttcattat aattaaattc agtaaaatgt aatgagtaaa
     3121 atctacattg caataagaca aatctctcta cccctctctc tgtctttctc tttgtctttc
     3181 ccccttatcg tttctgtgta tccctgcttt cctttctgtt tttaccatgg aaagatactg
     3241 agtttcacaa atggcatttt gaaatcaggt attttaccat tcaaactcta caacagaatt
     3301 ttgtttgatt aagcacttag caatatgact gaactgacag tttgagaaaa ataccctgca
     3361 tgtcagtact ggatatttag gttggaaaaa atgccctctt tattagacac attgtaaaaa
     3421 gcatgcattc tcaaatactg ctgttactgt tccatttctt tgtgtcatat gcttgctact
     3481 tgtaactttt atataaatat atataaaatg tataataatt tcct
//
