LOCUS       XM_006254206            3374 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus neuroepithelial cell transforming 1
            (Net1), transcript variant X1, mRNA.
ACCESSION   XM_006254206
VERSION     XM_006254206.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006254206.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006254206.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3374
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3374
                     /gene="Net1"
                     /note="neuroepithelial cell transforming 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 40 ESTs, 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     174 samples with support for all annotated introns"
                     /db_xref="GeneID:307098"
                     /db_xref="RGD:1305034"
     CDS             143..1930
                     /gene="Net1"
                     /codon_start=1
                     /product="neuroepithelial cell-transforming gene 1 protein
                     isoform X1"
                     /protein_id="XP_006254268.1"
                     /db_xref="GeneID:307098"
                     /db_xref="RGD:1305034"
                     /translation="MEPEPAAPKQPRPRRRSRRASVLSEDQAAGLPADTPGPAANERC
                     SLRRGSSFTFLTPGPHWDFTLKRKRREKDDDVVSLSSLDLKEPSNKRVRPLGRVTSLA
                     NLISPVRNGAVRRFGQTIQSFTLRGDHRSPASTQKSFSRATVPTPTKRRSSALWSEML
                     DISMKESLTTREIKRQEAIYELSRGEQDLIEDLKLARKAYHDPMLKLSIMSEEELTHI
                     FGDLDAYIPLHEDLLARIGEATKPDGTVEQIGHILVNWLPGLNAYRGYCSNQLAAKAL
                     LDQKKQDPRVQDFLQRCLESPFSRKLDLWSFLDIPRSRLVKYPLLLKEILRHTPKDHL
                     DVQLLEKAILIIQEVLSDINLKKGESECQYYIDKLEYLDEKQKDPRIEASKVLLCHGE
                     LKNKSGHKLYIFLFQDILVLTRPVTRNERHSYQVYRQPIPVQELVLEDLQDGDVRMGG
                     SFRGAFGNSDKAKNIFRVRFQDPSPGQSHTLQANDVFHKQQWFNCIRSAIAPFQRAAS
                     PLELQGLPDLHEECEENNPSAGNLRAQRRSCVLPGVMQVDHESVLECGSSVQTSEDTR
                     NAKAHRPQHGLRRARDKAQLGGKKKETLV"
ORIGIN      
        1 ttttcaaatc cccggatgat ggccgcagcc gctctctgct agaaggcaac ttgctgcttc
       61 gcagaagctg gcgggcaccg tgcccgccac gatcggtctg ctgggcactg ggccaccgcc
      121 ccacccaccc ccctctccgg acatggagcc agagccggcg gctcctaagc aaccccggcc
      181 gcggaggaga agccgcaggg cctcagtgct cagcgaggac caagccgcgg ggcttccggc
      241 cgacacaccc gggccggcgg cgaacgagag atgctccctt cggagaggca gctccttcac
      301 atttctaacc cctggcccgc actgggactt cactttgaaa agaaaacgac gagagaaaga
      361 tgatgatgtt gtaagcctta gcagccttga tttgaaggag ccaagcaata aaagagttcg
      421 gcccctaggt cgggtcacat ccttggcaaa cttaatctct cccgtaagaa atggagcagt
      481 caggcgcttt ggtcagacca tacagtcctt tacccttcgt ggtgaccaca gatctccagc
      541 ctctacccag aagtcattca gcagggccac agtccctaca cccaccaaga gaagaagcag
      601 tgcactatgg tcggagatgc tagacatcag tatgaaggag tccttgacca ctcgagagat
      661 caaacgacag gaggcaatat atgaattgtc ccgaggagaa caggacttaa tcgaggatct
      721 caagctcgct agaaaggcct accatgaccc catgttaaag ctgtccatca tgtcagaaga
      781 ggagctcaca catatatttg gagacctgga tgcttacatc cctctacacg aagatctgtt
      841 agcaagaata ggagaagcaa ccaagcctga cgggaccgtg gaacagatcg gtcacattct
      901 cgtgaattgg ttaccaggcc tgaacgccta cagaggctac tgtagcaacc agctggcggc
      961 caaggctctt ctggatcaga agaaacagga cccacgagtc caagacttcc tccagcgctg
     1021 tctggagtct cccttcagtc gaaagctaga tctttggagt ttcctagata ttcctcgaag
     1081 tcgcctcgtc aagtacccct tgctgttaaa agaaatcctt agacatacgc ccaaagacca
     1141 cctcgatgtt cagcttctgg agaaagcaat tttaataata caagaagttc tttctgatat
     1201 caacttgaag aaaggcgaat ccgagtgtca gtattacatc gacaaactgg agtacctgga
     1261 tgagaagcag aaggacccca ggatcgaggc gagcaaggtg ctgctgtgtc atggggagct
     1321 gaagaataaa agtggccata aactgtacat tttcttattt caagacatct tggttttgac
     1381 tcggcctgtc acccgaaatg agcgccactc ctaccaggtt taccgccagc ccatcccagt
     1441 gcaggagctg gtgctggaag acctgcagga cggggatgtg cgcatgggcg gctccttccg
     1501 aggggccttt ggcaactcag acaaagctaa aaatatcttt agagtgcgct tccaggaccc
     1561 ttctccaggc cagtcccaca cactgcaagc caacgatgtg ttccacaagc agcagtggtt
     1621 caactgcatt cgctcggcca tcgccccttt ccagcgggcc gccagccccc tcgagctgca
     1681 gggcttgcca gacctgcacg aagagtgtga ggagaacaac ccttctgctg ggaatctcag
     1741 agcccagcga cggtcatgcg tgcttcctgg tgttatgcag gtagaccatg aaagtgtgct
     1801 ggagtgtggc tcgagtgtac agacctcgga ggacaccagg aacgcaaagg cacatcggcc
     1861 tcagcatggc ctgcgaagag caagggacaa ggcgcagttg ggtggcaaaa agaaagagac
     1921 tttggtatga gtgtgtgtgt tccccggtgg gagctgttta tttataaatg tgtacagttt
     1981 tcttgtaacg ggagcgtcga gggctactct gtaccagatg taatatgtcc atggattggg
     2041 tctctctctc atcctctccc tctcccttcc tccccccccc caacccccac gtcctcgtct
     2101 gcgttgtcgt cattgtcgtt gttgttaatg gcagctaaag atacacaggt tactgttaga
     2161 gtgaagactt tgaaggggtg ttttcatgga tggtggcttt tatcagaaga aatgtggcag
     2221 aaccagtgtc gtccatgctg gtagaccgtg actttccacc aaatgccagt gtttgccaag
     2281 cttaaacctt gcaaatgctg aagttccgtc agcgttcttt gttagagctc aggtggagtg
     2341 cggaatttta ataatgacac ctgcagtcta catgggcgag gtctgagttt gaaatatttc
     2401 atatttacag ggagcgctgc ttccttggag aacaagcata aagcctgttg tcttcccctt
     2461 ttctcaactg gaacgaacga acgaacaccg tgtcagtctc acacggttct ccttctccat
     2521 tcattcattc tgccaactat ttaatttttt tttattgtaa agtagttttt agtatttgct
     2581 tttatttttt tacgttgatg cctttttaaa ttggcatatc cttgaagttt ttcctcctga
     2641 ttttgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt catattaatt
     2701 ttatcaagtg aaaccaagcc atattgtttg agccaattaa gaaaacagca gtttttacag
     2761 tgtatcatgt cagggtgata aagtcccatg aaatgactta gtgtattcta gactactgaa
     2821 agaaaccaca ggaagggtgg gtggaagttt ttgtgttgtc agaaaagcaa gagagaaggc
     2881 aggagactgg gatagtaaag ggaagggaaa gagtaatttg tctaaaattg tctggctgaa
     2941 ccagaggagc ggagctagga gcagcctgac ctgagggtat gtaggaagtt ggagaaggcc
     3001 agggggaatg tgaactctgt ttgctttggt ttctcatacc tgcaaatgct aaatttgaga
     3061 agaagccaca cggcgtgttg gaaatttggt taattctggt tggttttctt cattcaagaa
     3121 agctcgtgat tcttcactgc aaaatgtttg cattagaaat ggggtcatgc tctttaaagg
     3181 ggggagaagg acagaggccc catgtcagcc cagggtttta ctggtgatca gttcaagtca
     3241 ttgttaacca ttatgtgaaa tatatctcca gtggaactga aaattggaaa aggctgtaaa
     3301 taaatcaatc aaatgatttc tttgtataaa cgaattatac aattaaaaaa aagcacacac
     3361 ataataaccc aaaa
//
