LOCUS       NM_001134642            3296 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Rattus norvegicus nuclear envelope integral membrane protein 2
            (Nemp2), mRNA.
ACCESSION   NM_001134642 XM_001063473 XM_578791
VERSION     NM_001134642.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3296)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473965.2.
            
            On or before Sep 4, 2008 this sequence version replaced
            XM_578791.2, XM_001063473.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760389,
                              SAMEA5760434 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3296
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q22"
     gene            1..3296
                     /gene="Nemp2"
                     /gene_synonym="RGD1560421; Tmem194b"
                     /note="nuclear envelope integral membrane protein 2"
                     /db_xref="GeneID:503257"
                     /db_xref="RGD:1560421"
     exon            1..109
                     /gene="Nemp2"
                     /gene_synonym="RGD1560421; Tmem194b"
                     /inference="alignment:Splign:2.1.0"
     CDS             16..1281
                     /gene="Nemp2"
                     /gene_synonym="RGD1560421; Tmem194b"
                     /note="transmembrane protein 194B"
                     /codon_start=1
                     /product="nuclear envelope integral membrane protein 2
                     precursor"
                     /protein_id="NP_001128114.1"
                     /db_xref="GeneID:503257"
                     /db_xref="RGD:1560421"
                     /translation="MPPGSWWLVLWLPPLATLPAGAVPQEEAAMSVPRCKSLKETDLI
                     KTSVSDCYCYNQHSQIEWTYMWSTVQVTVTSPGLLSIVYITGRHTCQHTETILSFLKC
                     VTHNFWTAEEAKEVTIVFSPYGETVCFSVKPVGSLLTYAVSVNRNVVDFRLFLVFATG
                     IFLFFYAKTLSQSPVFYYSSGTVLGILMTLVFVLLMTKKHIPKYSTFGALMIGCWFAS
                     VYVLCQLMENLKWLWCGNRIYVLGYVLVVGLCSFSACYSRGPPADEGSRDLLMWALRF
                     LSLVLVYTGMAISQFAYAVMILLLLSWTRHYLLRAFSCLRWKVRQWFATRALVVRYLT
                     DDEYREQAEAETASALEELRQACCRPDFPSWLAVSRLQAPKKFAEFVLGASHLSPEEV
                     STHEKQYGLGGAFLEEQLFSLQTESLPAS"
     exon            110..225
                     /gene="Nemp2"
                     /gene_synonym="RGD1560421; Tmem194b"
                     /inference="alignment:Splign:2.1.0"
     exon            226..457
                     /gene="Nemp2"
                     /gene_synonym="RGD1560421; Tmem194b"
                     /inference="alignment:Splign:2.1.0"
     exon            458..530
                     /gene="Nemp2"
                     /gene_synonym="RGD1560421; Tmem194b"
                     /inference="alignment:Splign:2.1.0"
     exon            531..624
                     /gene="Nemp2"
                     /gene_synonym="RGD1560421; Tmem194b"
                     /inference="alignment:Splign:2.1.0"
     exon            625..739
                     /gene="Nemp2"
                     /gene_synonym="RGD1560421; Tmem194b"
                     /inference="alignment:Splign:2.1.0"
     exon            740..965
                     /gene="Nemp2"
                     /gene_synonym="RGD1560421; Tmem194b"
                     /inference="alignment:Splign:2.1.0"
     exon            966..1142
                     /gene="Nemp2"
                     /gene_synonym="RGD1560421; Tmem194b"
                     /inference="alignment:Splign:2.1.0"
     exon            1143..3296
                     /gene="Nemp2"
                     /gene_synonym="RGD1560421; Tmem194b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gttacactgg ccgtgatgcc ccccgggtcg tggtggctgg tgctttggct gccgcccctg
       61 gccacgctgc cagcgggtgc ggtgccccag gaggaggcgg caatgtcagt tccaagatgt
      121 aaatctctga aggaaacgga cttaattaaa acttctgtgt cagactgcta ttgctacaat
      181 caacattcac aaatagagtg gacatatatg tggtcaactg tgcaggtgac ggttaccagc
      241 ccgggcctgc tcagtattgt gtatatcaca ggaagacata cttgccagca cacagaaacc
      301 attctatctt ttctcaaatg tgtgactcac aacttttgga cagcagagga ggctaaggag
      361 gtgaccatag tcttcagtcc atacggagag actgtgtgct tctctgtaaa gcctgttggg
      421 agtttactta cctatgcagt aagcgtgaat cgaaatgttg tggatttcag actcttcctt
      481 gtgtttgcga caggcatttt ccttttcttt tatgcaaaga ccttgagcca aagccctgtt
      541 ttctattact cttcgggtac cgtgttaggt attctaatga ctctggtctt tgtccttctg
      601 atgactaaga aacacatccc gaagtatagc acatttgggg cgctaatgat tggttgttgg
      661 tttgcttcag tttatgtttt gtgccagttg atggaaaatc tgaagtggct gtggtgtgga
      721 aacagaatat atgtattagg ctatgtcttg gttgtcggac tttgtagctt ttccgcctgt
      781 tacagtcgcg ggcctcctgc tgatgagggg agcagagacc ttctgatgtg ggcactgagg
      841 ttcctctccc tcgttcttgt ctacactggt atggccatct ctcagtttgc ctatgctgtt
      901 atgatcctgc tcctgctctc ctggactcgg cactatctac tgagagcatt cagctgtctg
      961 aggtggaagg tgaggcagtg gtttgcaaca cgagcactgg tggtgaggta tctcactgat
     1021 gatgagtaca gggagcaagc ggaggccgaa acagccagcg ctctggagga actgcgccaa
     1081 gcctgctgcc ggcccgactt cccttcctgg ctagctgtct ccagactcca ggctcctaaa
     1141 aagtttgcag agtttgttct tggagcgagc cacctgtcac cggaagaagt cagcacacac
     1201 gaaaagcagt atggccttgg aggtgccttc ctggaagagc agctctttag cctgcagact
     1261 gagagtctac ctgcaagctg acttcattct gaaccggaaa gcaagtaaaa ggccaggctc
     1321 tgattgcagc tgggtggggc ccaagcactt cagagaaaag taaaccatgc aagtaaggaa
     1381 aaactcattt gcacaggaga gccttaccgt ggtgctgtga agactgaaag catcgttgcc
     1441 acaggccctg gatgaagacc ttcacaggga cagtggaaac ctgttcttta ggaccagtaa
     1501 acgggacctg atcccttccc ttcgtcaggc actaactccc ctctggatgc ctgggagctg
     1561 gctcaagagg ctgcattatt gtcatccctc ccaaaccccc aacctgtttc ctcagtacca
     1621 atgctttcta cggtgaggtt cacgtgatag taggaagtgc tgttgaagga attctgatgc
     1681 tggctctggt taactcagag tcacatgttc cccaggttcc tcagtctcca ggcagtgtgg
     1741 gtctcctaaa aggcagatgt catgcacagg acttctaact tactaaccac ttttcatgag
     1801 actaataatc tttaaaacac aggtttggga atgctatcga tggtagaact taggtttgag
     1861 tcaggacaga agtgtcatga gcagccttgg caacactgca gccctggtga atctgggact
     1921 cacttcttca catttaggtt cagagccttc tccattcagc cttggtctca tggccttggt
     1981 gcctcaagtt ttgttcgttt tggtttgttt tttgtttttg tttttttttt aagcaacacc
     2041 caattagcta taactgtgat taaaaagaaa catttcttag gattatattt aatgttttga
     2101 taagatttta tatgccgatg gattaaaatt ttaattactt cttgtacttt ttatatactg
     2161 aaattgaagc atggaggcat ttgtgacatt tttgagattt atttttttaa aacttattat
     2221 atatgtttgc aatgattctc acaaaataga tttgtgatat ttctgttttt ttagagagag
     2281 caatgtttct tgatccaggg taaactccag gatgaaatga gctactgact gtgctttgag
     2341 cccgaggaaa ggagcagaaa cacagccgta agagttgact gtagcagaca gacattctgt
     2401 gatcctctga gaatcaaagt caggttgttt tatcttttgt agtgtaatga taaaacaacc
     2461 acaaaaacag aaagcgtgag aggaagtggg acaagacaca gtcttggtct ctgtcatccc
     2521 ctgacagtgg tgctgacttc ggtactttct agattcactc tcaaatgatg ctgtctctgt
     2581 gaagctctgt gtcagtgttt ctgcccctgc tttttgacag atatagaata tccggagtct
     2641 ttttcttttt cttagaaact tcactcagtt caatctgtgc ctttacatgt tgttggcttt
     2701 aaaatgtcaa agaatggggt ctggagagat ggctcagtgg ttaagaagag ccttgcagag
     2761 gatctgagtt cagtcctcag catctgagtg gcatggcagc ttgcagccat gtataaccgt
     2821 agttccagga gatctgatac cttcctgtga ctttgctagc accagtcatg taagtgttgg
     2881 acatacatac acacaagaca aaaacacgtg taaataatgt gcttctgttc attttgagaa
     2941 ctattctgcc aaaatagaca ggtgttgtaa cattctgtca cagcgtaatc tggttttcgt
     3001 tttttagtaa ctgtatttat tggcggtgta tcggtgctgt gcacagccat gctcacctct
     3061 cactaagcag tttgtttaga atgtgagcca ccaggacagc cccagccttc ctgagctggc
     3121 agggaccgca ctgtgattac agctctcagc agcaagccag tgtacccaca gaaaacagcg
     3181 cagtctttcg ggatgccgtt ttccatgcct atctttggaa ggaatcatgg atctgtcaga
     3241 ttgttacatg acaactgtga aaagttaaac aattaaaata tttctggtaa aatgtt
//
