LOCUS       NP_001164057            1065 aa            linear   ROD 03-APR-2024
DEFINITION  ribosome quality control complex subunit NEMF [Rattus norvegicus].
ACCESSION   NP_001164057 XP_002726750 XP_002729696
VERSION     NP_001164057.2
DBSOURCE    REFSEQ: accession NM_001170586.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 1065)
  AUTHORS   Long,S.W., Ooi,J.Y., Yau,P.M. and Jones,P.L.
  TITLE     A brain-derived MeCP2 complex supports a role for MeCP2 in RNA
            processing
  JOURNAL   Biosci Rep 31 (5), 333-343 (2011)
   PUBMED   21070191
REFERENCE   2  (residues 1 to 1065)
  AUTHORS   Bi,X., Jones,T., Abbasi,F., Lee,H., Stultz,B., Hursh,D.A. and
            Mortin,M.A.
  TITLE     Drosophila caliban, a nuclear export mediator, can function as a
            tumor suppressor in human lung cancer cells
  JOURNAL   Oncogene 24 (56), 8229-8239 (2005)
   PUBMED   16103875
REFERENCE   3  (residues 1 to 1065)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
REFERENCE   4  (residues 1 to 1065)
  AUTHORS   Harter,C., Ripoll,C., Lenoir,M., Hamel,C.P. and Rebillard,G.
  TITLE     Expression pattern of mammalian cochlea outer hair cell (OHC) mRNA:
            screening of a rat OHC cDNA library
  JOURNAL   DNA Cell Biol 18 (1), 1-10 (1999)
   PUBMED   10025504
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Dec 9, 2020 this sequence version replaced NP_001164057.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data from several strains because no single
            transcript was available for the full length of the gene. The
            extent of this transcript is supported by transcript alignments and
            orthologous data.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA5760383, SAMEA5760386
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Rattus norvegicus"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q24"
     Protein         1..1065
                     /product="ribosome quality control complex subunit NEMF"
                     /note="serologically defined colon cancer antigen 1;
                     nuclear export mediator factor NEMF"
                     /calculated_mol_wt=121349
     Region          6..642
                     /region_name="RqcH_arch"
                     /note="ribosome rescue protein RqcH, archaeal type;
                     NF041120"
                     /db_xref="CDD:469043"
     Region          964..1055
                     /region_name="NFACT-C"
                     /note="NFACT protein C-terminal domain; pfam11923"
                     /db_xref="CDD:432191"
     CDS             1..1065
                     /gene="Nemf"
                     /gene_synonym="Sdccag1"
                     /coded_by="NM_001170586.3:41..3238"
                     /db_xref="GeneID:100322884"
                     /db_xref="RGD:2315525"
ORIGIN      
        1 mktrfstvdl ravlaelnan llgmrvnnvy dvdnktylir lqkpdfkatl llesgiriht
       61 tefewpknmm pssfamkcrk hlksrrlvsa kqlgvdrivd fqfgsdeaay hliielydrg
      121 nivltdyeyl ilnilrfrtd eaddvkfavr erypidhara aeplltlerl teviaraprg
      181 ellkrvlnpl lpygpalieh cliengfsgn vkvdeklesk diekilvcvq raedylekta
      241 nfngkgyiiq krevkpslda nkpaedilty eefhpflfsq hlqcpyiefe sfdkavdefy
      301 skiegqkidl kalqqekqal kkldnvrkdh enrlealqqa qeidklkgel iemnlqivdr
      361 aiqvvrsala nqidwteigv ivkeaqaqgd pvasaikelk lqtnhitmll rnpyllseee
      421 dgdgdgsien sdaeapkgkk kkqknkqlqk pqknkpllvd vdlslsayan akkyydhkry
      481 aakktqrtve aaekafksae kktkqtlkev qtvtsiqkar kvywfekflw fissenylii
      541 ggrdqqqnei ivkryltpgd iyvhadlhga tscviknptg dpipprtlte agtmalcysa
      601 awdarvitsa wwvhhhqvsk taptgeyltt gsfmirgkkn flppsylmmg fsflfkvdes
      661 cvwrhrgerk vrvqdedmet ltsctselms eemeqleggd sseeeteelr gtteevelrt
      721 qadpediaah sgreelssed geaiktatkd eepigevree eeepfeypdt tidlshlqsq
      781 rplqkltpre esfnssdsks qsrrhlsake rremkkkklp cdsgdlevie ekdkekesav
      841 hseadqntsk nvaagqpmkr gqkskmkkmk ekykdqdded relimkllas agsnkeekgk
      901 kgkkgktkde pvkknpqkpr ggqrvldvvk etpslqastp dlqdfavdep hddkeehdld
      961 qqgneenlfd sltgqphped vlmfaipica pytimtnyky kvkltpgvqk kgkaaktaln
     1021 sfmhskeata rekdlfrsvk dtdlsrnipg kvkvsapnll hvkrk
//
