LOCUS       XM_008771370            2414 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus NIMA-related kinase 5 (Nek5),
            transcript variant X1, mRNA.
ACCESSION   XM_008771370
VERSION     XM_008771370.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008771370.3.
            
            On Jan 21, 2021 this sequence version replaced XM_008771370.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2414
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2414
                     /gene="Nek5"
                     /note="NIMA-related kinase 5; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 8 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:685440"
                     /db_xref="RGD:1593817"
     CDS             105..2138
                     /gene="Nek5"
                     /codon_start=1
                     /product="serine/threonine-protein kinase Nek5 isoform X1"
                     /protein_id="XP_008769592.1"
                     /db_xref="GeneID:685440"
                     /db_xref="RGD:1593817"
                     /translation="MDKFDLIKIIGEGTFGKVYLAKDKSESCHCVIKEISLTKEKEAS
                     KNEVTLLAKMKHSNIVTFFSSFQENSRLFIVMEYCDGGDLMERIQRQRGVLFSEDQIL
                     CWFVQISLGLKHIHDKKVLHRDIKSQNIFLSKNGMVAKLGDFGTARTLNNSMELAQTC
                     AGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFESDNLHHLVLKICQGRVA
                     PISPHFSLDLQSLIPQLFRVSPQDRPSINSLLKRPFLETLVARYLSPEIHSRRIQSHA
                     RMENAAVGFTACWRGSPWSAAYLQRKSEARQYKLKVERQLQDLVYSYDGPVQSMAQGL
                     RPSSVEAHPNERENLQSHREETKFQELRYRKNKMNDQEYWKQLEEIRQQYHNDMKEIK
                     KKMGRELKENAGLSHRTYLVKRSNLPSCPDAPEDKVSKQRGVKFEISLDECISEEDTI
                     QEDEVHHYEPAAVISYANVVERLSDTLSFEDGMKFQESKCRGEREEDYTDRAFEELCG
                     SEAEGFFQDVTATENRRQWDAGAPQTLLQMMAAADITSTCPTMPDDGQVIVMDGSQEN
                     RKQWWQDVPGTPPALAIERACSGSLSAGKGETVMMINPQLPKEDEEEGEIAAGITVGD
                     ERLQRGSDGDVTKFEESEDELRSEIIESLEKLSASTEGREWDPSSSKNAEKPA"
ORIGIN      
        1 cccgggttgg ctctgcccct gcatcgggga agcttagctg ctggagacct gatctttttg
       61 gacacgtcca tgctcgctgc ataaagcagg gagctcctga agccatggat aaatttgacc
      121 tgatcaagat catcggggaa ggcaccttcg ggaaggtgta cttggctaaa gataaatcag
      181 aaagctgtca ctgtgtcatc aaggagatca gcttgacgaa ggaaaaagaa gcttcaaaga
      241 acgaagtgac tcttctggct aagatgaagc attccaacat tgtaaccttc ttcagctcat
      301 tccaagagaa cagcaggctg tttattgtca tggaatactg tgacggaggg gacctcatgg
      361 aaaggataca gaggcagcgg ggagtgttat tcagcgaaga ccagatcctg tgttggtttg
      421 tacagatttc tctaggactg aagcacattc atgacaagaa ggtattacac agggacataa
      481 aatctcagaa tattttcctt agcaagaatg gaatggttgc aaagcttggg gactttggaa
      541 cagcgagaac actgaataac tccatggaac ttgctcaaac atgtgctggg acaccttact
      601 acctgtcgcc agagatctgt cagaacaggc cgtacaacaa caaaacggat atttggtctc
      661 ttggctgtgt cttatatgag ctctgcacac tcaagcatcc ctttgagagt gacaacttac
      721 accatctggt tctgaagatt tgtcaaggac gtgttgctcc catatcaccc cacttctctc
      781 ttgacctaca gtctttgata cctcagctct tcagagtgtc tcctcaggat cgaccatcca
      841 ttaattccct tttgaaaagg ccctttttag aaactcttgt tgcccggtac ttgtcccctg
      901 agatccattc cagaagaatt cagtcccatg ctcgcatgga gaacgcggct gtcggcttca
      961 cagcttgttg gagaggtagt ccatggtctg ctgcatacct tcagaggaaa tctgaagctc
     1021 ggcaatataa gttaaaagtg gaaagacaat tgcaggactt agtctacagc tacgacggac
     1081 cagttcagtc aatggcacag ggtcttcgcc catcttctgt ggaggcgcat ccaaacgaga
     1141 gagaaaatct acaaagccat cgagaggaga ctaaattcca ggagcttcgg tacaggaaga
     1201 acaaaatgaa tgaccaggaa tattggaagc agctggagga aatccgccaa cagtaccaca
     1261 acgacatgaa ggaaattaaa aagaaaatgg ggagagagct gaaggagaat gccggcctca
     1321 gtcatagaac ctatttggta aagaggagta acctgccctc ctgccctgat gctcctgagg
     1381 acaaagtctc aaagcagaga ggggtaaagt ttgaaatcag cctagatgaa tgcatttcag
     1441 aggaagacac tatccaagag gatgaggtac atcattacga acctgctgct gtgatcagct
     1501 atgccaatgt ggtggagaga ctaagtgata ctttaagctt tgaagatggc atgaagtttc
     1561 aggagtctaa atgtaggggg gagcgtgaag aagattatac agacagagcc tttgaagaac
     1621 tctgcggctc agaagcagag ggtttctttc aggacgtcac tgccacagag aacaggaggc
     1681 agtgggatgc cggcgcacct cagactcttc tgcaaatgat ggccgcagca gacatcacct
     1741 ccacctgccc caccatgccg gatgatggcc aagttattgt gatggatggt agccaagaaa
     1801 acaggaagca gtggtggcag gatgtgccag gaacccctcc tgctttggca atagaacgtg
     1861 cctgcagtgg ctcattgtct gccggtaaag gagaaactgt aatgatgata aatccacagc
     1921 ttcctaaaga agatgaggaa gagggagaaa tagctgcggg catcacagtg ggtgatgaac
     1981 gactgcaacg gggttcggat ggggatgtta caaagtttga agaatccgag gatgagctga
     2041 gaagtgaaat aatagaatcc ctagaaaagc tctcagcttc cacagaagga agagaatggg
     2101 atcctagctc ctctaagaat gccgagaagc ctgcatagaa agaaaagaca aactcgccac
     2161 tccggaagct ccagtgaagg tctggaagca ccctttggcc tgtttaatct gcattgctaa
     2221 gaccaaggtt caccaaatgc cagtctaagt gtgcaagtgt gaacaatctg ttccccattg
     2281 atgggagtct gtgtccttaa aggaaaattc actatcttcc tgattttaca cactctgtcc
     2341 tgacgagctc ttgaaggaca gctctgatga ggactgtttt tagctttacg tccatctatt
     2401 aaactgaaac tata
//
