LOCUS       XM_039095233            1116 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus NIMA-related kinase 3 (Nek3),
            transcript variant X7, mRNA.
ACCESSION   XM_039095233
VERSION     XM_039095233.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039095233.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1116
                     /gene="Nek3"
                     /note="NIMA-related kinase 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 42 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:306576"
                     /db_xref="RGD:1307419"
     CDS             143..940
                     /gene="Nek3"
                     /codon_start=1
                     /product="serine/threonine-protein kinase Nek3 isoform X6"
                     /protein_id="XP_038951161.1"
                     /db_xref="GeneID:306576"
                     /db_xref="RGD:1307419"
                     /translation="MDNYTVLRVIGHGSFGSVLLATEKSSNQTFAMKEIRLLKSFSDV
                     QNCRKEAVLLAKMKHPNIVAFKESFEAEGHLYIVMEYCDGGDLTQRIKQQKGKLFPED
                     TVLNWFIQICLGVNHIHKRRVLHRDIKSKNVFLTHDGKVKLGDFGSARLLSSPMAFAR
                     TYVGTPYYVPPEIWENLPYNNKSDIWSLGCILYELCALKHPFQANSWKNLILKICQGP
                     IHPLPALYSSKLQCLVKQMLKRNPVHRPSATTLLCRDHQRIWRTDIR"
ORIGIN      
        1 cgcccacgcc acaggtcccg cccatgcccc gcccagcgcc cggccaggcg gctggcgaag
       61 aagcgacgcg cgccgctggg aggtgggtga gtttgggcga gccagcagtg actaggagtg
      121 gagcccagct gcgctgccga ccatggacaa ctacacagtc ctgagagtga taggccacgg
      181 ctccttcggc agcgttcttt tggctacaga gaaaagcagc aatcagacat tcgccatgaa
      241 ggaaataaga ctgctcaagt ctttctctga cgtacagaat tgtaggaaag aggctgttct
      301 gctggccaaa atgaaacacc ccaatattgt tgcctttaag gagtcattcg aagctgaagg
      361 gcatctgtat attgtgatgg agtattgtga cggaggggac ctaacgcaga ggattaaaca
      421 gcagaaagga aagttattcc ccgaagatac ggtacttaat tggtttatac agatctgtct
      481 tggagtaaat cacattcaca agagacgggt tttacacaga gatatcaagt ccaaaaatgt
      541 cttcctcacc cacgatggaa aagtgaaatt gggagatttt ggctctgccc gccttctctc
      601 cagtcccatg gcatttgcac gcacgtatgt gggaacacct tattatgtgc ctccagaaat
      661 ctgggagaac ctgccttata acaataaaag tgacatctgg tccttggggt gcatcctgta
      721 tgaactctgc gctctgaagc atccatttca ggcaaatagt tggaaaaatc tcatcctgaa
      781 aatatgtcag gggcccatcc acccgctgcc tgctctgtat tcctctaagc ttcagtgtct
      841 ggtcaagcag atgttgaaaa ggaaccctgt gcaccgtccc tccgccacga ccctgctctg
      901 cagagatcat cagagaatat ggagaacaga tattagatga agtaaaaata tccaagcctc
      961 agaacgtgaa aaaacaaggt aacccaccag agcccccgag gaatgccagt ccagcaagcc
     1021 ctcacaggca gaggtgggag agatacggtc ccagttccgc tgtagcagcc ttggagaaag
     1081 catccatcct gacctccagt ttcacggcgg aggatg
//
