LOCUS       NM_022302               1204 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus N-terminal EF-hand calcium binding protein 1
            (Necab1), mRNA.
ACCESSION   NM_022302
VERSION     NM_022302.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1204)
  AUTHORS   Cui,W., Dai,X., Marcho,C., Han,Z., Zhang,K., Tremblay,K.D. and
            Mager,J.
  TITLE     Towards Functional Annotation of the Preimplantation Transcriptome:
            An RNAi Screen in Mammalian Embryos
  JOURNAL   Sci Rep 6, 37396 (2016)
   PUBMED   27869233
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1204)
  AUTHORS   Sugita,S., Ho,A. and Sudhof,T.C.
  TITLE     NECABs: a family of neuronal Ca(2+)-binding proteins with an
            unusual domain structure and a restricted expression pattern
  JOURNAL   Neuroscience 112 (1), 51-63 (2002)
   PUBMED   12044471
  REMARK    GeneRIF: Determines domain structure of the Necab 1 protein that
            expressed in the brain.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AF193755.1.
            
            [WARNING] On Apr 9, 2024 this sequence was replaced by NM_022302.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF193755.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5756307,
                                           SAMEA5760383 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1204
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q13"
     gene            1..1204
                     /gene="Necab1"
                     /gene_synonym="Efcbp1; Stip-1"
                     /note="N-terminal EF-hand calcium binding protein 1"
                     /db_xref="GeneID:64169"
                     /db_xref="RGD:708548"
     CDS             76..1134
                     /gene="Necab1"
                     /gene_synonym="Efcbp1; Stip-1"
                     /note="neuronal Ca(2+)-binding protein 1; synaptotagmin
                     interacting protein 1; EF-hand calcium-binding protein 1;
                     neuronal calcium-binding protein 1"
                     /codon_start=1
                     /product="N-terminal EF-hand calcium-binding protein 1"
                     /protein_id="NP_071638.1"
                     /db_xref="GeneID:64169"
                     /db_xref="RGD:708548"
                     /translation="MEDSRETSPSSNNSSEELSSALQLSKGMSIFLDILRRADKNDDG
                     KLSFEEFKAYFADGVLSGEELHELFHTIDTHNTNNLDTEELCEYFSQHLGEYENVLAA
                     LEDLNLSILKAMGKTKKDYQEASNLEQFVTRFLLKETLNQLQSLQNSLECAMETTEEQ
                     TRQERQGPSKPEVLSIQWPGKRSSRRVQRHNSFSPNSPQFNVSSPALLEEDNQWMTQI
                     NRLQKLIDRLEKKDLKLEPLEEEVIEENTKPHIMLVQRQMSVTEEDLEEFQLALKHYV
                     ESASAQSGCLRISIQKLSNESRYMIYEFWENSSVWNRHLQTNYSKTFQRSNVDFLETP
                     ELTSTMLVPASWWILKNN"
ORIGIN      
        1 gaattcccag gtcagaaccg ctgcatccca cccgcccagt cagttctctg cccgccggcg
       61 ccagggttgc tgaggatgga ggattcccgg gagacctcgc cgtcctccaa caactcctca
      121 gaagagctca gctctgccct gcagctgtcc aagggcatgt ccatcttcct cgacatactg
      181 aggagagcag acaaaaatga cgatggaaaa ttgtcctttg aggaatttaa agcgtatttt
      241 gcagatggag ttctcagtgg agaagaacta catgagctct tccacaccat tgacacacac
      301 aataccaaca atcttgacac agaagaacta tgtgaatatt tttctcagca cttgggtgaa
      361 tatgagaatg ttctggctgc acttgaagac ctgaatctct ccatcctgaa agcaatgggc
      421 aagacaaaga aagactacca agaagcctcc aatttggaac aatttgtcac tcgatttttg
      481 ttgaaggaaa ccttgaatca gttgcagtct cttcagaact ctctggaatg tgccatggaa
      541 actactgaag agcaaacccg tcaagaaagg caagggccat ccaagccaga agtcttgtcc
      601 attcaatggc ctggaaagcg atccagccgc cgagtccaga gacacaacag tttctccccc
      661 aacagcccac agttcaatgt cagcagccca gcattgttag aagaagacaa tcagtggatg
      721 acccagataa acagactcca gaaattaatt gatagactgg aaaagaagga tctgaaactt
      781 gaacccctgg aagaagaagt tattgaagag aacactaaac ctcacatcat gcttgtgcag
      841 cgccagatgt ctgtgacaga agaggatctg gaagaattcc agcttgctct gaagcactac
      901 gtggagagcg cttcagcaca aagtgggtgc ctgcgtatct ctatacagaa gctttcaaat
      961 gaatctcgct acatgattta tgagttctgg gagaatagca gtgtgtggaa ccgccacctt
     1021 cagacaaatt acagcaagac gttccaaaga agcaacgtgg atttcttgga aactccagag
     1081 ctcacatcta ctatgctcgt tcctgcttca tggtggatcc tgaaaaacaa ttagatgccc
     1141 cacacaatgt cttcaagtgt tccaagtgcc aagtggtcat tcctatctac agcggaaacc
     1201 ggaa
//
