LOCUS       XM_001053017             522 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus NADH:ubiquinone oxidoreductase subunit
            S6-like 1 (Ndufs6l1), transcript variant X1, mRNA.
ACCESSION   XM_001053017
VERSION     XM_001053017.6
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Aug 7, 2023 this sequence was replaced by
            NM_001423689.1.
            
            On Jan 21, 2021 this sequence version replaced XM_001053017.5.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..522
                     /gene="Ndufs6l1"
                     /note="NADH:ubiquinone oxidoreductase subunit S6-like 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 25 ESTs, 206 long SRA reads, 4
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 247 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:679739"
                     /db_xref="RGD:1584802"
     CDS             49..399
                     /gene="Ndufs6l1"
                     /codon_start=1
                     /product="NADH dehydrogenase [ubiquinone] iron-sulfur
                     protein 6, mitochondrial"
                     /protein_id="XP_001053017.1"
                     /db_xref="GeneID:679739"
                     /db_xref="RGD:1584802"
                     /translation="MAAALTFRRLLALPRAARGFGVRVSRSGEKITHTGQVYDEKDYR
                     RIRFVDRQKEVNENFAIDLIAQQPVNEVDHRIIACDGGGGALGHPKVYINLDKETKTG
                     TCGYCGLQFKQQHH"
ORIGIN      
        1 ctgcgccggc gctctgtacg acgcgtgggg ttaagggtcg tcggcaagat ggcggcggcg
       61 ctgaccttcc gccggctgtt ggctctccct agggctgccc ggggcttcgg ggtgcgagtg
      121 tcgcggagcg gggagaagat cacgcatacc ggccaggtgt atgatgaaaa agactacagg
      181 aggattcgtt ttgtagatcg tcagaaagag gtgaatgaga actttgccat tgatttgata
      241 gcacaacaac ctgtgaatga ggtggaccat cgtatcatag cctgtgatgg agggggtgga
      301 gccttgggcc accccaaggt gtatataaac ctggacaaag aaacaaaaac gggtacgtgt
      361 ggctactgcg gcctgcagtt caagcagcag catcactagt gtgggctgtg tcctggtcct
      421 ctgacacctg tggagcatct catgcttagt gttctggtgt gaggtcactg ctctgtgaat
      481 ggtgtccctt gttatgaata aaggatgctc ccaccatgga ca
//
