LOCUS       NM_001399603             533 bp    mRNA    linear   ROD 22-SEP-2024
DEFINITION  Rattus norvegicus NADH:ubiquinone oxidoreductase subunit C1
            (Ndufc1), mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001399603 XM_003749275
VERSION     NM_001399603.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 533)
  AUTHORS   Guo,R., Zong,S., Wu,M., Gu,J. and Yang,M.
  TITLE     Architecture of Human Mitochondrial Respiratory Megacomplex
            I2III2IV2
  JOURNAL   Cell 170 (6), 1247-1257 (2017)
   PUBMED   28844695
REFERENCE   3  (bases 1 to 533)
  AUTHORS   Stroud,D.A., Surgenor,E.E., Formosa,L.E., Reljic,B., Frazier,A.E.,
            Dibley,M.G., Osellame,L.D., Stait,T., Beilharz,T.H., Thorburn,D.R.,
            Salim,A. and Ryan,M.T.
  TITLE     Accessory subunits are integral for assembly and function of human
            mitochondrial complex I
  JOURNAL   Nature 538 (7623), 123-126 (2016)
   PUBMED   27626371
REFERENCE   4  (bases 1 to 533)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jan 12, 2022 this sequence version replaced XM_003749275.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DV215169.1, DV215168.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676784, SAMN16676786
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-75                JAXUCZ010000002.1  137601661-137601735 c
            76-179              JAXUCZ010000002.1  137600927-137601030 c
            180-256             JAXUCZ010000002.1  137600156-137600232 c
            257-533             JAXUCZ010000002.1  137597944-137598220 c
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q26"
     gene            1..533
                     /gene="Ndufc1"
                     /note="NADH:ubiquinone oxidoreductase subunit C1"
                     /db_xref="GeneID:689938"
                     /db_xref="RGD:1586362"
     exon            1..75
                     /gene="Ndufc1"
                     /inference="alignment:Splign:2.1.0"
     CDS             9..239
                     /gene="Ndufc1"
                     /note="rCG49984-like; NADH dehydrogenase (ubiquinone) 1,
                     subcomplex unknown, 1"
                     /codon_start=1
                     /product="NADH dehydrogenase [ubiquinone] 1 subunit C1,
                     mitochondrial"
                     /protein_id="NP_001386532.1"
                     /db_xref="GeneID:689938"
                     /db_xref="RGD:1586362"
                     /translation="MAPPVVLRSFSRLLAPARLPSCSSTRSKFYVREPVNAKPNWVKV
                     GLTLGTSIFMWIYLIHQHNEDVLEYKRRNGLE"
     exon            76..179
                     /gene="Ndufc1"
                     /inference="alignment:Splign:2.1.0"
     exon            180..256
                     /gene="Ndufc1"
                     /inference="alignment:Splign:2.1.0"
     exon            257..533
                     /gene="Ndufc1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agcgcaacat ggcgccgccc gtagtactgc gctcgttttc gcggctgctg gcccccgcca
       61 ggctgccgag ctgctcttca acacggtcaa agttctatgt ccgggagcca gtcaatgcca
      121 aacctaactg ggtgaaagtt gggctgacct tgggcacctc gattttcatg tggatttatc
      181 tcatccacca acacaacgaa gatgttttgg agtataaaag aagaaatgga ctggaataaa
      241 ctttggagat actacagtct gcttcctgtg atgatctttg tcattcctct gatctatcca
      301 gagttgtgga tatgagaaaa aatttacatg tgaatatgtc ctagtcaagt caacgtgtat
      361 attttgcatt gttaaagaaa taaaaaaggg gttggggatt tagctcagtg gtagagcgct
      421 tgcctagcaa gcgcaaggcc ctgggtttgg tccccagctc cgaaaaaaag gaaaaaaaag
      481 aaaaaaaaag aaagaaataa aaatacttgt gctcttcatg tgtagagatg gaa
//
