LOCUS       NM_001127294             710 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus NADH:ubiquinone oxidoreductase subunit B9
            (Ndufb9), mRNA.
ACCESSION   NM_001127294 XM_001069131 XM_216929
VERSION     NM_001127294.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 710)
  AUTHORS   Guo,R., Zong,S., Wu,M., Gu,J. and Yang,M.
  TITLE     Architecture of Human Mitochondrial Respiratory Megacomplex
            I2III2IV2
  JOURNAL   Cell 170 (6), 1247-1257 (2017)
   PUBMED   28844695
REFERENCE   2  (bases 1 to 710)
  AUTHORS   Stroud,D.A., Surgenor,E.E., Formosa,L.E., Reljic,B., Frazier,A.E.,
            Dibley,M.G., Osellame,L.D., Stait,T., Beilharz,T.H., Thorburn,D.R.,
            Salim,A. and Ryan,M.T.
  TITLE     Accessory subunits are integral for assembly and function of human
            mitochondrial complex I
  JOURNAL   Nature 538 (7623), 123-126 (2016)
   PUBMED   27626371
REFERENCE   3  (bases 1 to 710)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
REFERENCE   4  (bases 1 to 710)
  AUTHORS   Da Cruz,S., Xenarios,I., Langridge,J., Vilbois,F., Parone,P.A. and
            Martinou,J.C.
  TITLE     Proteomic analysis of the mouse liver mitochondrial inner membrane
  JOURNAL   J Biol Chem 278 (42), 41566-41571 (2003)
   PUBMED   12865426
REFERENCE   5  (bases 1 to 710)
  AUTHORS   Murray,J., Zhang,B., Taylor,S.W., Oglesbee,D., Fahy,E.,
            Marusich,M.F., Ghosh,S.S. and Capaldi,R.A.
  TITLE     The subunit composition of the human NADH dehydrogenase obtained by
            rapid one-step immunopurification
  JOURNAL   J Biol Chem 278 (16), 13619-13622 (2003)
   PUBMED   12611891
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Mar 18, 2021 this sequence version replaced NM_001127294.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ224000.1, FQ091830.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-184               JAXUCZ010000007.1  92370423-92370606
            185-377             JAXUCZ010000007.1  92373029-92373221
            378-491             JAXUCZ010000007.1  92373951-92374064
            492-710             JAXUCZ010000007.1  92376623-92376841
FEATURES             Location/Qualifiers
     source          1..710
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q33"
     gene            1..710
                     /gene="Ndufb9"
                     /note="NADH:ubiquinone oxidoreductase subunit B9"
                     /db_xref="GeneID:299954"
                     /db_xref="RGD:1307114"
     exon            1..184
                     /gene="Ndufb9"
                     /inference="alignment:Splign:2.1.0"
     CDS             84..623
                     /gene="Ndufb9"
                     /note="NADH dehydrogenase (ubiquinone) 1 beta subcomplex,
                     9"
                     /codon_start=1
                     /product="NADH dehydrogenase [ubiquinone] 1 beta
                     subcomplex subunit 9"
                     /protein_id="NP_001120766.1"
                     /db_xref="GeneID:299954"
                     /db_xref="RGD:1307114"
                     /translation="MAFCAPPAYLTHRQKVLRLYKRALRHLESWCVHRDKYRYLACLM
                     RARFEEHKNEKDMMKATQLLRQAEEEFWQNQHPQPYIFPDSPGGTSYERYECYKVPEW
                     CLDYWHPSEKAVYPDYFSKREQWKKLRMESWDREVKQLEEETSPDGIMTEALPPARKE
                     GDLPPLWWHIVTRPRERPT"
     exon            185..377
                     /gene="Ndufb9"
                     /inference="alignment:Splign:2.1.0"
     exon            378..491
                     /gene="Ndufb9"
                     /inference="alignment:Splign:2.1.0"
     exon            492..710
                     /gene="Ndufb9"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 attcttccgg ctccgtctcg caaccgcctg cttccgggtt cccggcagcc cccgcggcag
       61 ccgctgaagg tgagccgggc gctatggcgt tctgtgctcc cccggcctac ttaacccacc
      121 ggcagaaggt gctgcggctg tataagcgcg cgctgcgcca cctcgagtca tggtgtgtcc
      181 acagggacaa ataccggtac cttgcttgct tgatgagagc ccggtttgaa gaacataaga
      241 atgagaagga catgatgaag gccacccagc tgctgaggca ggcggaagaa gaattctggc
      301 aaaaccagca tcctcagccg tatatcttcc cagactctcc tgggggtact tcctatgaga
      361 gatacgagtg ctacaaggtt ccagaatggt gcttagatta ctggcatcct tctgagaaag
      421 cagtgtatcc tgattacttt tccaagagag agcagtggaa gaaactgagg atggagagct
      481 gggatcggga ggttaaacag ctggaggaag aaacgtcacc tgatggtatt atgactgaag
      541 ctttgcctcc tgccagaaag gaaggcgact tgcccccatt gtggtggcat attgtgacca
      601 gacctcggga acggcccaca tagagacagg caccgcactg ttcatgcttg caagtgagag
      661 ttacagaaca cattcacact tgccctaata aaagtaacta gagacagtca
//
