LOCUS       XM_006239627            2461 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus NADH:ubiquinone oxidoreductase complex
            assembly factor 7 (Ndufaf7), transcript variant X2, mRNA.
ACCESSION   XM_006239627
VERSION     XM_006239627.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_006239627.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2461
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2461
                     /gene="Ndufaf7"
                     /gene_synonym="RGD1311578"
                     /note="NADH:ubiquinone oxidoreductase complex assembly
                     factor 7; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 26 ESTs, 3 long SRA reads, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 134 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:298748"
                     /db_xref="RGD:1311578"
     CDS             217..1416
                     /gene="Ndufaf7"
                     /gene_synonym="RGD1311578"
                     /codon_start=1
                     /product="protein arginine methyltransferase NDUFAF7,
                     mitochondrial isoform X2"
                     /protein_id="XP_006239689.1"
                     /db_xref="GeneID:298748"
                     /db_xref="RGD:1311578"
                     /translation="MLRHLMYKIKSTGPITVAEYMKEVLTNPAKGYYVHHDMLGEKGD
                     FITSPEISQIFGELLGVWFVSEWMASGKSTAFQLVELGPGRGTLTADILRVFSQLGSV
                     LKTCDISIHLVEVSQKLSEIQALTLTEETVPLERDAESLVYMKGVTKSGIPISWYRDL
                     KDVPTGYSFYLAHEFFDVLPVHKFQKTPHGWREVFVDIDPQSPDKLRFVLAPCATPAE
                     AFIQRDERREHVEVCPDAGVVIQELSQRIASTGGAALIADYGHDGTKTDTLRGFYEHQ
                     LHDVLTAPGTADLTADVDFSYLRRMAQGRVASLGPVEQRTFLKNMGIDVRLKVLLDKA
                     GDPSLQQQLLRGYDMLMNPQKMGERFHFFALLPHQRLHVGSQGGKACQSEAPSTSVPG
                     FDELVWH"
ORIGIN      
        1 cttagttcct ctgtagcttc ttggggctgg agctggagtt ggaagccggt tcgcacagag
       61 gcttggctgt gtggaggagc ttgtagtcat gagttcaatg cacacctcca tcgggttctg
      121 acgttggggc gaagttagtg atgcattccc agtatttgga gaaggaagtg cttcagctcc
      181 gggaatgagc cggcagaaag caaccacgtg acaccgatgc tgcggcatct tatgtataaa
      241 ataaagtcta caggtcccat cactgtggcc gagtacatga aggaggtttt gaccaatcca
      301 gccaagggat attacgtgca ccatgatatg ctaggagaaa agggagactt tattacttca
      361 cctgaaataa gtcaaatctt cggggagcta ctcggggtgt ggttcgttag tgaatggatg
      421 gcctccggaa agagtacagc cttccagctg gtggaacttg gtccaggtcg gggtaccctc
      481 acagcagata ttttgagggt gttcagtcag cttgggtctg tgctaaaaac ctgtgacatt
      541 tcaatacacc ttgtagaggt gagccaaaag ttaagtgaga tccaagcact gacactgacc
      601 gaggagacag tccctttgga gagagatgct gaatccctag tgtacatgaa aggtgtcacg
      661 aagtctggga ttccaatctc ctggtatcga gacctgaagg atgttcctac aggatacagc
      721 ttttatctcg cacatgagtt ttttgatgtt cttcctgtgc ataaatttca gaaaacacca
      781 catggatgga gagaagtgtt tgttgatatc gacccacaat ctcctgataa actgaggttc
      841 gtcttggcgc cttgtgcgac tccagcagaa gccttcatac aacgcgatga aagaagggag
      901 catgtggagg tttgtcctga tgctggggtt gtcatccagg aactgtccca gcgcattgca
      961 tcaactggag gtgctgccct gattgcggat tacggtcacg atggaacaaa gactgacacc
     1021 ttgagagggt tttatgaaca ccagctgcac gatgtcctga cagctcctgg aacagcagac
     1081 ctgacagctg acgtagactt cagttacctg cgcagaatgg cacaaggacg agtagcttct
     1141 ctgggtcccg tggaacaaag aacatttcta aaaaacatgg gcattgatgt gcggctgaag
     1201 gttcttttgg ataaagcagg tgacccatcc ctgcagcagc agctacttcg gggatacgat
     1261 atgctaatga atcctcagaa gatgggagag agatttcact tctttgcctt gctgcctcat
     1321 cagagacttc atgtgggaag tcaaggaggg aaggcctgcc agtcagaagc cccctcgacc
     1381 tctgtacctg ggtttgatga actggtttgg cactgatatt tcagctgcct tgattatcag
     1441 aataaaagaa attcactttg catactgaag ttgacttaag tactcacact gtcaactctt
     1501 ttcagtcgat ggcctgtttt atatgaacac aatcaaaacg gtaaaatgtt aaaggttata
     1561 accaactcct ggtataattg ttttcaaccc agtgaagcag tttattgtga aattgtttcc
     1621 tttatcaaat tactgtattt ctacttactt tttaaaaaca tatgagcact gattggtttg
     1681 ctattttcag ggatccgagt caacagatct ggatattttt aaagggcaaa aggcagtgta
     1741 ttctgataga aggctctcta aggtttagta tttgaaagaa gtcagatgtg agtttctaga
     1801 gttaagatcc tgtttttgct gaggagataa ttaactgaat atgccagtat acacttggtt
     1861 ctctggtctg tggagtgcac agatgaaggc agagtgactg gtaaggagtc agcagttctc
     1921 cattctggaa gcaggattca gaatacacat gcttctgtgg atgaaagtaa agactgataa
     1981 ctacaatttt aaagaagtca taagtcatag ttaaaaagac tgcagcaaat ctgactttta
     2041 ctgaagtaag aattaagagc aatgttaact atccaggagg aacaatttcc taggctgagc
     2101 tcattctgtt gtattttcag gtcaatacac aattttagtt ctgtattaaa ttggtctgta
     2161 gaaccattct atttatcctg taaatgggca ttccttatca gcagcagtcc tgaggagctg
     2221 aggtgggaat ggtattagcc atgcctcagc ctgtggtaac tgcagtgaaa gtcactgatg
     2281 gagtggtatg ccactgactc atttattccc gtttccgctt agccgagcgt ggccttaacc
     2341 ttctgtgtct tcgtctgtga gagggaccag gctagaacac ttgaaagaag taaataatta
     2401 cttatattat tctttgtgct ggcatcccaa taaacgaacc ctctagataa ttatgtcaaa
     2461 t
//
